RNA–Protein interactions for RNA: ENST00000547201.5

USP25-209, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 2

Gene USP25, Length 757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-209ENST00000547201 SUPT20HL1Q3ZLR7 823 aa6.55□□□□□ -1.36
USP25-209ENST00000547201 CERKLQ49MI3 558 aaPredicted RBP6.55□□□□□ -1.36
USP25-209ENST00000547201 DCAF15Q66K64 600 aa6.55□□□□□ -1.36
USP25-209ENST00000547201 ZNF574Q6ZN55 896 aaPredicted RBP6.55□□□□□ -1.36
USP25-209ENST00000547201 ARMC9Q7Z3E5 817 aa6.55□□□□□ -1.36
USP25-209ENST00000547201 PRRT2Q7Z6L0 340 aaPredicted RBP6.55□□□□□ -1.36
USP25-209ENST00000547201 CCDC74AQ96AQ1 378 aa6.55□□□□□ -1.36
USP25-209ENST00000547201 DNAJC25Q9H1X3 360 aa6.55□□□□□ -1.36
USP25-209ENST00000547201 DHX36Q9H2U1 1008 aaKnown RBP6.55□□□□□ -1.36
USP25-209ENST00000547201 ATXN3LQ9H3M9 355 aa6.55□□□□□ -1.36
USP25-209ENST00000547201 TXNRD2Q9NNW7 524 aa6.55□□□□□ -1.36
USP25-209ENST00000547201 CRIM1Q9NZV1 1036 aa6.55□□□□□ -1.36
USP25-209ENST00000547201 HERC5Q9UII4 1024 aaKnown RBP6.55□□□□□ -1.36
USP25-209ENST00000547201 SNX14Q9Y5W7 946 aa6.55□□□□□ -1.36
USP25-209ENST00000547201 FRMPD2Q68DX3 1309 aaPredicted RBP6.54□□□□□ -1.36
USP25-209ENST00000547201 TMEM238LA0A1B0GVL6 79 aa6.54□□□□□ -1.36
USP25-209ENST00000547201 EIF1AYO14602 144 aaKnown RBP6.54□□□□□ -1.36
USP25-209ENST00000547201 ADAMTS3O15072 1205 aa6.54□□□□□ -1.36
USP25-209ENST00000547201 CTNND1O60716 968 aaKnown RBP6.54□□□□□ -1.36
USP25-209ENST00000547201 GADD45BO75293 160 aaPredicted RBP6.54□□□□□ -1.36
USP25-209ENST00000547201 LARGE1O95461 756 aa6.54□□□□□ -1.36
USP25-209ENST00000547201 LIG1P18858 919 aa6.54□□□□□ -1.36
USP25-209ENST00000547201 GNAT2P19087 354 aa6.54□□□□□ -1.36
USP25-209ENST00000547201 NF2P35240 595 aa6.54□□□□□ -1.36
USP25-209ENST00000547201 FKBP1BP68106 108 aa6.54□□□□□ -1.36
USP25-209ENST00000547201 TFAP4Q01664 338 aa6.54□□□□□ -1.36
USP25-209ENST00000547201 ATP2B2Q01814 1243 aa6.54□□□□□ -1.36
USP25-209ENST00000547201 CRHR2Q13324 411 aa6.54□□□□□ -1.36
USP25-209ENST00000547201 PLCL1Q15111 1095 aa6.54□□□□□ -1.36
USP25-209ENST00000547201 SEC23AQ15436 765 aa6.54□□□□□ -1.36
USP25-209ENST00000547201 AKNAD1Q5T1N1 836 aa6.54□□□□□ -1.36
USP25-209ENST00000547201 TTBK2Q6IQ55 1244 aa6.54□□□□□ -1.36
USP25-209ENST00000547201 GIMAP6Q6P9H5 292 aa6.54□□□□□ -1.36
USP25-209ENST00000547201 GADL1Q6ZQY3 521 aa6.54□□□□□ -1.36
USP25-209ENST00000547201 ERO1BQ86YB8 467 aa6.54□□□□□ -1.36
USP25-209ENST00000547201 ENAHQ8N8S7 591 aaPredicted RBP6.54□□□□□ -1.36
USP25-209ENST00000547201 JMYQ8N9B5 988 aa6.54□□□□□ -1.36
USP25-209ENST00000547201 SHISA4Q96DD7 197 aa6.54□□□□□ -1.36
USP25-209ENST00000547201 MISP3Q96FF7 219 aa6.54□□□□□ -1.36
USP25-209ENST00000547201 UPF3BQ9BZI7 483 aaKnown RBP6.54□□□□□ -1.36
USP25-209ENST00000547201 CCDC86Q9H6F5 360 aaKnown RBP6.54□□□□□ -1.36
USP25-209ENST00000547201 RNF186Q9NXI6 227 aa6.54□□□□□ -1.36
USP25-209ENST00000547201 CSADQ9Y600 493 aa6.54□□□□□ -1.36
USP25-209ENST00000547201 BRCA2P51587 3418 aa6.54□□□□□ -1.36
USP25-209ENST00000547201 DOCK3Q8IZD9 2030 aa6.54□□□□□ -1.36
USP25-209ENST00000547201 TNKSO95271 1327 aa6.53□□□□□ -1.36
USP25-209ENST00000547201 ORC4O43929 436 aa6.53□□□□□ -1.36
USP25-209ENST00000547201 RANBP6O60518 1105 aaKnown RBP6.53□□□□□ -1.36
USP25-209ENST00000547201 PAPLNO95428 1278 aa6.53□□□□□ -1.36
USP25-209ENST00000547201 NDUFB10O96000 172 aa6.53□□□□□ -1.36
USP25-209ENST00000547201 C8AP07357 584 aa6.53□□□□□ -1.36
USP25-209ENST00000547201 SLFN14P0C7P3 912 aa6.53□□□□□ -1.36
USP25-209ENST00000547201 FAM87AP0C7U9 286 aa6.53□□□□□ -1.36
USP25-209ENST00000547201 GOLGA8HP0CJ92 632 aa6.53□□□□□ -1.36
USP25-209ENST00000547201 HSPA8P11142 646 aaKnown RBP6.53□□□□□ -1.36
USP25-209ENST00000547201 HSPA4P34932 840 aa6.53□□□□□ -1.36
USP25-209ENST00000547201 NOVP48745 357 aa6.53□□□□□ -1.36
USP25-209ENST00000547201 ID3Q02535 119 aa6.53□□□□□ -1.36
USP25-209ENST00000547201 CDK5R2Q13319 367 aa6.53□□□□□ -1.36
USP25-209ENST00000547201 FAM83BQ5T0W9 1011 aa6.53□□□□□ -1.36
USP25-209ENST00000547201 TTC6Q86TZ1 520 aa6.53□□□□□ -1.36
USP25-209ENST00000547201 WFDC3Q8IUB2 231 aa6.53□□□□□ -1.36
USP25-209ENST00000547201 FOXP4Q8IVH2 680 aaPredicted RBP6.53□□□□□ -1.36
USP25-209ENST00000547201 KCNB2Q92953 911 aa6.53□□□□□ -1.36
USP25-209ENST00000547201 WDR89Q96FK6 387 aaPredicted RBP6.53□□□□□ -1.36
USP25-209ENST00000547201 HHIPL1Q96JK4 782 aa6.53□□□□□ -1.36
USP25-209ENST00000547201 FANCD2OSQ96PS1 177 aa6.53□□□□□ -1.36
USP25-209ENST00000547201 TMEM47Q9BQJ4 181 aa6.53□□□□□ -1.36
USP25-209ENST00000547201 TOMM22Q9NS69 142 aa6.53□□□□□ -1.36
USP25-209ENST00000547201 MTMR4Q9NYA4 1195 aa6.53□□□□□ -1.36
USP25-209ENST00000547201 BTBD7Q9P203 1132 aa6.53□□□□□ -1.36
USP25-209ENST00000547201 ZSWIM5Q9P217 1185 aa6.53□□□□□ -1.36
USP25-209ENST00000547201 CPA4Q9UI42 421 aa6.53□□□□□ -1.36
USP25-209ENST00000547201 RBBP6Q7Z6E9 1792 aaKnown RBP6.53□□□□□ -1.36
USP25-209ENST00000547201 CENPFP49454 3210 aa6.52□□□□□ -1.37
USP25-209ENST00000547201 hCG_1642624A0A1W2PR95 340 aa6.52□□□□□ -1.37
USP25-209ENST00000547201 HIP1O00291 1037 aa6.52□□□□□ -1.37
USP25-209ENST00000547201 BIN1O00499 593 aa6.52□□□□□ -1.37
USP25-209ENST00000547201 SH2B2O14492 632 aaPredicted RBP6.52□□□□□ -1.37
USP25-209ENST00000547201 ZNF213O14771 459 aa6.52□□□□□ -1.37
USP25-209ENST00000547201 GPR182O15218 404 aa6.52□□□□□ -1.37
USP25-209ENST00000547201 PTGS1P23219 599 aa6.52□□□□□ -1.37
USP25-209ENST00000547201 SLC16A2P36021 539 aa6.52□□□□□ -1.37
USP25-209ENST00000547201 BACE1P56817 501 aa6.52□□□□□ -1.37
USP25-209ENST00000547201 PPATQ06203 517 aa6.52□□□□□ -1.37
USP25-209ENST00000547201 FAAP100Q0VG06 881 aa6.52□□□□□ -1.37
USP25-209ENST00000547201 TOB2Q14106 344 aaPredicted RBP6.52□□□□□ -1.37
USP25-209ENST00000547201 ZNF792Q3KQV3 632 aa6.52□□□□□ -1.37
USP25-209ENST00000547201 TMEM179Q6ZVK1 233 aa6.52□□□□□ -1.37
USP25-209ENST00000547201 KCTD1Q719H9 257 aa6.52□□□□□ -1.37
USP25-209ENST00000547201 NOL8Q76FK4 1167 aaKnown RBP6.52□□□□□ -1.37
USP25-209ENST00000547201 SPRED2Q7Z698 418 aa6.52□□□□□ -1.37
USP25-209ENST00000547201 CCDC144CPQ8IYA2 1237 aa6.52□□□□□ -1.37
USP25-209ENST00000547201 SMYD4Q8IYR2 804 aaPredicted RBP6.52□□□□□ -1.37
USP25-209ENST00000547201 NETO1Q8TDF5 533 aa6.52□□□□□ -1.37
USP25-209ENST00000547201 ATG4CQ96DT6 458 aa6.52□□□□□ -1.37
USP25-209ENST00000547201 RPAP3Q9H6T3 665 aaPredicted RBP6.52□□□□□ -1.37
USP25-209ENST00000547201 LY9Q9HBG7 655 aa6.52□□□□□ -1.37
USP25-209ENST00000547201 PICK1Q9NRD5 415 aa6.52□□□□□ -1.37
USP25-209ENST00000547201 KRT82Q9NSB4 513 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms