RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 CNR2P34972 360 aa6.4□□□□□ -1.38
HMGB1P1-201ENST00000522557 SCNN1BP51168 640 aa6.4□□□□□ -1.38
HMGB1P1-201ENST00000522557 FAM47CQ5HY64 1035 aa6.4□□□□□ -1.38
HMGB1P1-201ENST00000522557 UBXN11Q5T124 520 aa6.4□□□□□ -1.38
HMGB1P1-201ENST00000522557 SYDE2Q5VT97 1194 aa6.4□□□□□ -1.38
HMGB1P1-201ENST00000522557 CNTD1Q8N815 330 aa6.4□□□□□ -1.38
HMGB1P1-201ENST00000522557 CHTF18Q8WVB6 975 aa6.4□□□□□ -1.38
HMGB1P1-201ENST00000522557 CAMKK2Q96RR4 588 aa6.4□□□□□ -1.38
HMGB1P1-201ENST00000522557 CEP89Q96ST8 783 aa6.4□□□□□ -1.38
HMGB1P1-201ENST00000522557 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.4□□□□□ -1.38
HMGB1P1-201ENST00000522557 SPTLC3Q9NUV7 552 aa6.4□□□□□ -1.38
HMGB1P1-201ENST00000522557 TRHDEQ9UKU6 1024 aa6.4□□□□□ -1.38
HMGB1P1-201ENST00000522557 NUB1Q9Y5A7 615 aa6.4□□□□□ -1.38
HMGB1P1-201ENST00000522557 NCANO14594 1321 aa6.4□□□□□ -1.39
HMGB1P1-201ENST00000522557 MROH6A6NGR9 719 aa6.39□□□□□ -1.39
HMGB1P1-201ENST00000522557 FAM90A27PA6NNH2 459 aa6.39□□□□□ -1.39
HMGB1P1-201ENST00000522557 TSPAN6O43657 245 aa6.39□□□□□ -1.39
HMGB1P1-201ENST00000522557 SYN1P17600 705 aa6.39□□□□□ -1.39
HMGB1P1-201ENST00000522557 KRT15P19012 456 aa6.39□□□□□ -1.39
HMGB1P1-201ENST00000522557 BUD31P41223 144 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P1-201ENST00000522557 DNM2P50570 870 aa6.39□□□□□ -1.39
HMGB1P1-201ENST00000522557 JAM2P57087 298 aa6.39□□□□□ -1.39
HMGB1P1-201ENST00000522557 PHC1P78364 1004 aa6.39□□□□□ -1.39
HMGB1P1-201ENST00000522557 TMPRSS15P98073 1019 aa6.39□□□□□ -1.39
HMGB1P1-201ENST00000522557 PFKPQ01813 784 aa6.39□□□□□ -1.39
HMGB1P1-201ENST00000522557 GPR19Q15760 415 aa6.39□□□□□ -1.39
HMGB1P1-201ENST00000522557 FAM26FQ5R3K3 315 aa6.39□□□□□ -1.39
HMGB1P1-201ENST00000522557 BTBD8Q5XKL5 378 aa6.39□□□□□ -1.39
HMGB1P1-201ENST00000522557 VASNQ6EMK4 673 aa6.39□□□□□ -1.39
HMGB1P1-201ENST00000522557 PTRH1Q86Y79 214 aaKnown RBP6.39□□□□□ -1.39
HMGB1P1-201ENST00000522557 EFHBQ8N7U6 833 aa6.39□□□□□ -1.39
HMGB1P1-201ENST00000522557 DTX3Q8N9I9 347 aa6.39□□□□□ -1.39
HMGB1P1-201ENST00000522557 ZCCHC14Q8WYQ9 949 aaKnown RBP6.39□□□□□ -1.39
HMGB1P1-201ENST00000522557 RTFDC1Q9BY42 306 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P1-201ENST00000522557 CCDC8Q9H0W5 538 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P1-201ENST00000522557 VTA1Q9NP79 307 aa6.39□□□□□ -1.39
HMGB1P1-201ENST00000522557 PTPDC1A2A3K4 754 aa6.38□□□□□ -1.39
HMGB1P1-201ENST00000522557 MAN2B1O00754 1011 aa6.38□□□□□ -1.39
HMGB1P1-201ENST00000522557 KCNK3O14649 394 aa6.38□□□□□ -1.39
HMGB1P1-201ENST00000522557 AKAP10O43572 662 aa6.38□□□□□ -1.39
HMGB1P1-201ENST00000522557 ABLIM3O94929 683 aa6.38□□□□□ -1.39
HMGB1P1-201ENST00000522557 GLRBP48167 497 aa6.38□□□□□ -1.39
HMGB1P1-201ENST00000522557 KRT85P78386 507 aa6.38□□□□□ -1.39
HMGB1P1-201ENST00000522557 ST5P78524 1137 aa6.38□□□□□ -1.39
HMGB1P1-201ENST00000522557 ARHGAP44Q17R89 818 aa6.38□□□□□ -1.39
HMGB1P1-201ENST00000522557 CD276Q5ZPR3 534 aa6.38□□□□□ -1.39
HMGB1P1-201ENST00000522557 FMNL3Q8IVF7 1028 aa6.38□□□□□ -1.39
HMGB1P1-201ENST00000522557 CISD2Q8N5K1 135 aaKnown RBP6.38□□□□□ -1.39
HMGB1P1-201ENST00000522557 CLRN3Q8NCR9 226 aa6.38□□□□□ -1.39
HMGB1P1-201ENST00000522557 DLG3Q92796 817 aa6.38□□□□□ -1.39
HMGB1P1-201ENST00000522557 C8orf48Q96LL4 319 aa6.38□□□□□ -1.39
HMGB1P1-201ENST00000522557 YTHDC1Q96MU7 727 aaKnown RBP6.38□□□□□ -1.39
HMGB1P1-201ENST00000522557 BDH2Q9BUT1 245 aa6.38□□□□□ -1.39
HMGB1P1-201ENST00000522557 BOCQ9BWV1 1114 aa6.38□□□□□ -1.39
HMGB1P1-201ENST00000522557 CDH19Q9H159 772 aa6.38□□□□□ -1.39
HMGB1P1-201ENST00000522557 L2HGDHQ9H9P8 463 aa6.38□□□□□ -1.39
HMGB1P1-201ENST00000522557 CABP5Q9NP86 173 aa6.38□□□□□ -1.39
HMGB1P1-201ENST00000522557 DLL4Q9NR61 685 aa6.38□□□□□ -1.39
HMGB1P1-201ENST00000522557 OXSMQ9NWU1 459 aa6.38□□□□□ -1.39
HMGB1P1-201ENST00000522557 H2AFY2Q9P0M6 372 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P1-201ENST00000522557 SRPK3Q9UPE1 567 aa6.38□□□□□ -1.39
HMGB1P1-201ENST00000522557 TNKSO95271 1327 aa6.38□□□□□ -1.39
HMGB1P1-201ENST00000522557 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P1-201ENST00000522557 SHTN1A0MZ66 631 aa6.37□□□□□ -1.39
HMGB1P1-201ENST00000522557 CYP1A1P04798 512 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P1-201ENST00000522557 CELA3BP08861 270 aa6.37□□□□□ -1.39
HMGB1P1-201ENST00000522557 ENO2P09104 434 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P1-201ENST00000522557 COL6A1P12109 1028 aa6.37□□□□□ -1.39
HMGB1P1-201ENST00000522557 KIAA2012Q0VF49 1180 aa6.37□□□□□ -1.39
HMGB1P1-201ENST00000522557 CRY1Q16526 586 aa6.37□□□□□ -1.39
HMGB1P1-201ENST00000522557 SKIDA1Q1XH10 827 aa6.37□□□□□ -1.39
HMGB1P1-201ENST00000522557 GPR158Q5T848 1215 aa6.37□□□□□ -1.39
HMGB1P1-201ENST00000522557 TRMT10BQ6PF06 316 aaKnown RBP6.37□□□□□ -1.39
HMGB1P1-201ENST00000522557 LCORQ96JN0 433 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P1-201ENST00000522557 SLC13A1Q9BZW2 595 aa6.37□□□□□ -1.39
HMGB1P1-201ENST00000522557 TCF7L1Q9HCS4 588 aa6.37□□□□□ -1.39
HMGB1P1-201ENST00000522557 RIC8BQ9NVN3 520 aa6.37□□□□□ -1.39
HMGB1P1-201ENST00000522557 SLC52A1Q9NWF4 448 aa6.37□□□□□ -1.39
HMGB1P1-201ENST00000522557 THG1LQ9NWX6 298 aaKnown RBP6.37□□□□□ -1.39
HMGB1P1-201ENST00000522557 INVSQ9Y283 1065 aa6.37□□□□□ -1.39
HMGB1P1-201ENST00000522557 SPEF1Q9Y4P9 236 aa6.37□□□□□ -1.39
HMGB1P1-201ENST00000522557 SPO11Q9Y5K1 396 aa6.37□□□□□ -1.39
HMGB1P1-201ENST00000522557 GSTA4O15217 222 aa6.36□□□□□ -1.39
HMGB1P1-201ENST00000522557 GAS7O60861 476 aa6.36□□□□□ -1.39
HMGB1P1-201ENST00000522557 PTPN1P18031 435 aaKnown RBP6.36□□□□□ -1.39
HMGB1P1-201ENST00000522557 RAB27AP51159 221 aa6.36□□□□□ -1.39
HMGB1P1-201ENST00000522557 SMAD3P84022 425 aaKnown RBP6.36□□□□□ -1.39
HMGB1P1-201ENST00000522557 PLP2Q04941 152 aa6.36□□□□□ -1.39
HMGB1P1-201ENST00000522557 PIN1Q13526 163 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P1-201ENST00000522557 SEC23AQ15436 765 aa6.36□□□□□ -1.39
HMGB1P1-201ENST00000522557 SMAD2Q15796 467 aaKnown RBP6.36□□□□□ -1.39
HMGB1P1-201ENST00000522557 FIGNQ5HY92 759 aa6.36□□□□□ -1.39
HMGB1P1-201ENST00000522557 NLGN4XQ8N0W4 816 aa6.36□□□□□ -1.39
HMGB1P1-201ENST00000522557 TSR2Q969E8 191 aaKnown RBP6.36□□□□□ -1.39
HMGB1P1-201ENST00000522557 CHMP4CQ96CF2 233 aa6.36□□□□□ -1.39
HMGB1P1-201ENST00000522557 TMEM168Q9H0V1 697 aa6.36□□□□□ -1.39
HMGB1P1-201ENST00000522557 SLC39A2Q9NP94 309 aa6.36□□□□□ -1.39
HMGB1P1-201ENST00000522557 ARHGAP20Q9P2F6 1191 aa6.36□□□□□ -1.39
HMGB1P1-201ENST00000522557 ZFP69BQ9UJL9 534 aa6.36□□□□□ -1.39
HMGB1P1-201ENST00000522557 B3GALT1Q9Y5Z6 326 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 567.7 ms