RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 IL17REQ8NFR9 667 aa13.03□□□□□ -0.32
SPIDR-217ENST00000522117 SCG3Q8WXD2 468 aaKnown RBP13.03□□□□□ -0.32
SPIDR-217ENST00000522117 PPP2R3CQ969Q6 453 aa13.03□□□□□ -0.32
SPIDR-217ENST00000522117 EXOC1Q9NV70 894 aa13.03□□□□□ -0.32
SPIDR-217ENST00000522117 FPGT-TNNI3KV9GXZ4 949 aa13.03□□□□□ -0.32
SPIDR-217ENST00000522117 LTN1O94822 1766 aa13.03□□□□□ -0.32
SPIDR-217ENST00000522117 A0A1W2PQJ5 194 aa13.03□□□□□ -0.32
SPIDR-217ENST00000522117 TRIM43BA6NCK2 446 aa13.03□□□□□ -0.32
SPIDR-217ENST00000522117 DAPK3O43293 454 aa13.03□□□□□ -0.32
SPIDR-217ENST00000522117 KRT38O76015 456 aa13.03□□□□□ -0.32
SPIDR-217ENST00000522117 FTCDO95954 541 aa13.03□□□□□ -0.32
SPIDR-217ENST00000522117 BCRP11274 1271 aa13.03□□□□□ -0.32
SPIDR-217ENST00000522117 MYCLP1P12525 358 aaPredicted RBP13.03□□□□□ -0.32
SPIDR-217ENST00000522117 MLH1P40692 756 aa13.03□□□□□ -0.32
SPIDR-217ENST00000522117 METAP2P50579 478 aaKnown RBP eCLIP13.03□□□□□ -0.32
SPIDR-217ENST00000522117 SESN3P58005 492 aa13.03□□□□□ -0.32
SPIDR-217ENST00000522117 HOOK3Q86VS8 718 aa13.03□□□□□ -0.32
SPIDR-217ENST00000522117 DENND2DQ9H6A0 471 aaPredicted RBP13.03□□□□□ -0.32
SPIDR-217ENST00000522117 TRPV5Q9NQA5 729 aa13.03□□□□□ -0.32
SPIDR-217ENST00000522117 TCP11X1B4DZS4 312 aa13.02□□□□□ -0.32
SPIDR-217ENST00000522117 FOXP2O15409 715 aa13.02□□□□□ -0.32
SPIDR-217ENST00000522117 LYNP07948 512 aa13.02□□□□□ -0.32
SPIDR-217ENST00000522117 UBTFL6P0CB48 400 aaPredicted RBP13.02□□□□□ -0.32
SPIDR-217ENST00000522117 KCNA2P16389 499 aa13.02□□□□□ -0.32
SPIDR-217ENST00000522117 ITGA6P23229 1130 aa13.02□□□□□ -0.32
SPIDR-217ENST00000522117 BDNFP23560 247 aa13.02□□□□□ -0.32
SPIDR-217ENST00000522117 PRCPP42785 496 aa13.02□□□□□ -0.32
SPIDR-217ENST00000522117 PMS1P54277 932 aaKnown RBP13.02□□□□□ -0.32
SPIDR-217ENST00000522117 CCDC152Q4G0S7 254 aa13.02□□□□□ -0.32
SPIDR-217ENST00000522117 RILPL1Q5EBL4 403 aa13.02□□□□□ -0.32
SPIDR-217ENST00000522117 LRRC43Q8N309 656 aa13.02□□□□□ -0.32
SPIDR-217ENST00000522117 SCFD2Q8WU76 684 aa13.02□□□□□ -0.32
SPIDR-217ENST00000522117 SYMPKQ92797 1274 aaKnown RBP13.02□□□□□ -0.32
SPIDR-217ENST00000522117 DBNDD2Q9BQY9 259 aa13.02□□□□□ -0.32
SPIDR-217ENST00000522117 UBAC1Q9BSL1 405 aa13.02□□□□□ -0.32
SPIDR-217ENST00000522117 AZI2Q9H6S1 392 aa13.02□□□□□ -0.32
SPIDR-217ENST00000522117 EFR3BQ9Y2G0 817 aa13.02□□□□□ -0.32
SPIDR-217ENST00000522117 GDAQ9Y2T3 454 aa13.02□□□□□ -0.32
SPIDR-217ENST00000522117 TMEM247A6NEH6 219 aa13.02□□□□□ -0.33
SPIDR-217ENST00000522117 PALMO75781 387 aa13.02□□□□□ -0.33
SPIDR-217ENST00000522117 GPSM2P81274 684 aa13.02□□□□□ -0.33
SPIDR-217ENST00000522117 MEI1Q5TIA1 1274 aa13.02□□□□□ -0.33
SPIDR-217ENST00000522117 SNX30Q5VWJ9 437 aa13.02□□□□□ -0.33
SPIDR-217ENST00000522117 OLFML2BQ68BL8 750 aa13.02□□□□□ -0.33
SPIDR-217ENST00000522117 SCUBE1Q8IWY4 988 aa13.02□□□□□ -0.33
SPIDR-217ENST00000522117 CABLES1Q8TDN4 633 aa13.02□□□□□ -0.33
SPIDR-217ENST00000522117 LRRC8CQ8TDW0 803 aa13.02□□□□□ -0.33
SPIDR-217ENST00000522117 ABTB1Q969K4 478 aaPredicted RBP13.02□□□□□ -0.33
SPIDR-217ENST00000522117 TMEM237Q96Q45 408 aa13.02□□□□□ -0.33
SPIDR-217ENST00000522117 MIS12Q9H081 205 aa13.02□□□□□ -0.33
SPIDR-217ENST00000522117 DHX36Q9H2U1 1008 aaKnown RBP13.02□□□□□ -0.33
SPIDR-217ENST00000522117 DCLRE1BQ9H816 532 aa13.02□□□□□ -0.33
SPIDR-217ENST00000522117 TXLNGQ9NUQ3 528 aa13.02□□□□□ -0.33
SPIDR-217ENST00000522117 BABAM1Q9NWV8 329 aa13.02□□□□□ -0.33
SPIDR-217ENST00000522117 STOML1Q9UBI4 398 aa13.02□□□□□ -0.33
SPIDR-217ENST00000522117 PACSIN2Q9UNF0 486 aaPredicted RBP13.02□□□□□ -0.33
SPIDR-217ENST00000522117 PLAGL2Q9UPG8 496 aa13.02□□□□□ -0.33
SPIDR-217ENST00000522117 HGSO14964 777 aaPredicted RBP13.01□□□□□ -0.33
SPIDR-217ENST00000522117 FXNQ16595 210 aa13.01□□□□□ -0.33
SPIDR-217ENST00000522117 ZNF658Q5TYW1 1059 aaPredicted RBP13.01□□□□□ -0.33
SPIDR-217ENST00000522117 FAM47EQ6ZV65 393 aa13.01□□□□□ -0.33
SPIDR-217ENST00000522117 TMC4Q7Z404 712 aa13.01□□□□□ -0.33
SPIDR-217ENST00000522117 PALB2Q86YC2 1186 aa13.01□□□□□ -0.33
SPIDR-217ENST00000522117 C2CD5Q86YS7 1000 aa13.01□□□□□ -0.33
SPIDR-217ENST00000522117 DIS3L2Q8IYB7 885 aaKnown RBP13.01□□□□□ -0.33
SPIDR-217ENST00000522117 NAT14Q8WUY8 206 aa13.01□□□□□ -0.33
SPIDR-217ENST00000522117 CCDC28BQ9BUN5 200 aa13.01□□□□□ -0.33
SPIDR-217ENST00000522117 STK32BQ9NY57 414 aa13.01□□□□□ -0.33
SPIDR-217ENST00000522117 UBAP1Q9NZ09 502 aa13.01□□□□□ -0.33
SPIDR-217ENST00000522117 MAP3K2Q9Y2U5 619 aa13.01□□□□□ -0.33
SPIDR-217ENST00000522117 SOS2Q07890 1332 aaPredicted RBP13.01□□□□□ -0.33
SPIDR-217ENST00000522117 MMP1P03956 469 aa13.01□□□□□ -0.33
SPIDR-217ENST00000522117 ZCCHC18P0CG32 403 aa13.01□□□□□ -0.33
SPIDR-217ENST00000522117 SMARCA1P28370 1054 aa13.01□□□□□ -0.33
SPIDR-217ENST00000522117 KPNB1Q14974 876 aaKnown RBP13.01□□□□□ -0.33
SPIDR-217ENST00000522117 USH1GQ495M9 461 aa13.01□□□□□ -0.33
SPIDR-217ENST00000522117 FIGNQ5HY92 759 aa13.01□□□□□ -0.33
SPIDR-217ENST00000522117 RNF43Q68DV7 783 aa13.01□□□□□ -0.33
SPIDR-217ENST00000522117 CGB2Q6NT52 195 aa13.01□□□□□ -0.33
SPIDR-217ENST00000522117 ECHDC2Q86YB7 292 aa13.01□□□□□ -0.33
SPIDR-217ENST00000522117 CFAP61Q8NHU2 1237 aa13.01□□□□□ -0.33
SPIDR-217ENST00000522117 CATSPER2Q96P56 530 aa13.01□□□□□ -0.33
SPIDR-217ENST00000522117 DDX25Q9UHL0 483 aaKnown RBP13.01□□□□□ -0.33
SPIDR-217ENST00000522117 PHRF1Q9P1Y6 1649 aaKnown RBP13.01□□□□□ -0.33
SPIDR-217ENST00000522117 UTYO14607 1347 aa13□□□□□ -0.33
SPIDR-217ENST00000522117 A6NJR5 290 aa13□□□□□ -0.33
SPIDR-217ENST00000522117 GNAT3A8MTJ3 354 aa13□□□□□ -0.33
SPIDR-217ENST00000522117 NUDT17P0C025 328 aa13□□□□□ -0.33
SPIDR-217ENST00000522117 TFCP2Q12800 502 aa13□□□□□ -0.33
SPIDR-217ENST00000522117 GIT2Q14161 759 aa13□□□□□ -0.33
SPIDR-217ENST00000522117 GSTA3Q16772 222 aa13□□□□□ -0.33
SPIDR-217ENST00000522117 CERKLQ49MI3 558 aaPredicted RBP13□□□□□ -0.33
SPIDR-217ENST00000522117 SPDYCQ5MJ68 293 aa13□□□□□ -0.33
SPIDR-217ENST00000522117 CYP4X1Q8N118 509 aa13□□□□□ -0.33
SPIDR-217ENST00000522117 NKX2-3Q8TAU0 364 aa13□□□□□ -0.33
SPIDR-217ENST00000522117 FAM217BQ9NTX9 383 aaPredicted RBP13□□□□□ -0.33
SPIDR-217ENST00000522117 MAGEC2Q9UBF1 373 aaPredicted RBP13□□□□□ -0.33
SPIDR-217ENST00000522117 KCNJ14Q9UNX9 436 aa13□□□□□ -0.33
SPIDR-217ENST00000522117 ATP8A1Q9Y2Q0 1164 aa13□□□□□ -0.33
SPIDR-217ENST00000522117 NWD1Q149M9 1564 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms