RNA–Protein interactions for RNA: ENST00000502908.2

SCARB2-203, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-203ENST00000502908 HNRNPH1P31943 449 aaKnown RBP20.32■□□□□ 0.84
SCARB2-203ENST00000502908 ZNF844Q08AG5 666 aa20.32■□□□□ 0.84
SCARB2-203ENST00000502908 B4GALNT4Q76KP1 1039 aa20.32■□□□□ 0.84
SCARB2-203ENST00000502908 NGLY1Q96IV0 654 aa20.32■□□□□ 0.84
SCARB2-203ENST00000502908 DNM3Q9UQ16 869 aa20.32■□□□□ 0.84
SCARB2-203ENST00000502908 ATAD5Q96QE3 1844 aa20.32■□□□□ 0.84
SCARB2-203ENST00000502908 H0YGN5 161 aa20.32■□□□□ 0.84
SCARB2-203ENST00000502908 H0YHG0 523 aa20.32■□□□□ 0.84
SCARB2-203ENST00000502908 MEFVO15553 781 aaPredicted RBP20.32■□□□□ 0.84
SCARB2-203ENST00000502908 IFT88Q13099 833 aa20.32■□□□□ 0.84
SCARB2-203ENST00000502908 FRMD5Q7Z6J6 570 aa20.32■□□□□ 0.84
SCARB2-203ENST00000502908 ETNPPLQ8TBG4 499 aa20.32■□□□□ 0.84
SCARB2-203ENST00000502908 PIGOQ8TEQ8 1089 aa20.32■□□□□ 0.84
SCARB2-203ENST00000502908 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.32■□□□□ 0.84
SCARB2-203ENST00000502908 TRIM51Q9BSJ1 452 aa20.32■□□□□ 0.84
SCARB2-203ENST00000502908 NFS1Q9Y697 457 aa20.32■□□□□ 0.84
SCARB2-203ENST00000502908 FOCADQ5VW36 1801 aa20.31■□□□□ 0.84
SCARB2-203ENST00000502908 SRCAPQ6ZRS2 3230 aa20.31■□□□□ 0.84
SCARB2-203ENST00000502908 HMGB1P1B2RPK0 211 aaPredicted RBP20.31■□□□□ 0.84
SCARB2-203ENST00000502908 ZBTB39O15060 712 aa20.31■□□□□ 0.84
SCARB2-203ENST00000502908 FLOT1O75955 427 aa20.31■□□□□ 0.84
SCARB2-203ENST00000502908 SERPINB2P05120 415 aa20.31■□□□□ 0.84
SCARB2-203ENST00000502908 ZBTB48P10074 688 aaPredicted RBP20.31■□□□□ 0.84
SCARB2-203ENST00000502908 EEF2P13639 858 aaKnown RBP20.31■□□□□ 0.84
SCARB2-203ENST00000502908 PRPF4BQ13523 1007 aaKnown RBP20.31■□□□□ 0.84
SCARB2-203ENST00000502908 ODF2Q5BJF6 829 aa20.31■□□□□ 0.84
SCARB2-203ENST00000502908 PPP4R3CPQ6ZMV5 832 aa20.31■□□□□ 0.84
SCARB2-203ENST00000502908 ACTRT1Q8TDG2 376 aa20.31■□□□□ 0.84
SCARB2-203ENST00000502908 SLC35C1Q96A29 364 aa20.31■□□□□ 0.84
SCARB2-203ENST00000502908 DNAJC18Q9H819 358 aa20.31■□□□□ 0.84
SCARB2-203ENST00000502908 PLCB1Q9NQ66 1216 aa20.31■□□□□ 0.84
SCARB2-203ENST00000502908 TRAF3IP3Q9Y228 551 aa20.31■□□□□ 0.84
SCARB2-203ENST00000502908 COG2Q14746 738 aa20.31■□□□□ 0.84
SCARB2-203ENST00000502908 ZC2HC1CQ53FD0 456 aaPredicted RBP20.31■□□□□ 0.84
SCARB2-203ENST00000502908 CDC42EP5Q6NZY7 148 aa20.31■□□□□ 0.84
SCARB2-203ENST00000502908 GLYCTKQ8IVS8 523 aa20.31■□□□□ 0.84
SCARB2-203ENST00000502908 IPO4Q8TEX9 1081 aaKnown RBP20.31■□□□□ 0.84
SCARB2-203ENST00000502908 RBM17Q96I25 401 aaKnown RBP20.31■□□□□ 0.84
SCARB2-203ENST00000502908 PBKQ96KB5 322 aa20.31■□□□□ 0.84
SCARB2-203ENST00000502908 H2AFZP0C0S5 128 aa20.3■□□□□ 0.84
SCARB2-203ENST00000502908 SF3A3Q12874 501 aaKnown RBP eCLIP20.3■□□□□ 0.84
SCARB2-203ENST00000502908 IKQ13123 557 aaPredicted RBP20.3■□□□□ 0.84
SCARB2-203ENST00000502908 CRY2Q49AN0 593 aa20.3■□□□□ 0.84
SCARB2-203ENST00000502908 H2AFVQ71UI9 128 aa20.3■□□□□ 0.84
SCARB2-203ENST00000502908 LNX1Q8TBB1 728 aaPredicted RBP20.3■□□□□ 0.84
SCARB2-203ENST00000502908 PITPNM2Q9BZ72 1349 aa20.3■□□□□ 0.84
SCARB2-203ENST00000502908 IGSF9BQ9UPX0 1349 aa20.3■□□□□ 0.84
SCARB2-203ENST00000502908 GALCP54803 685 aa20.3■□□□□ 0.84
SCARB2-203ENST00000502908 SYT2Q8N9I0 419 aaPredicted RBP20.3■□□□□ 0.84
SCARB2-203ENST00000502908 LRRC4BQ9NT99 713 aa20.3■□□□□ 0.84
SCARB2-203ENST00000502908 CNOT8Q9UFF9 292 aaKnown RBP20.3■□□□□ 0.84
SCARB2-203ENST00000502908 CALUO43852 315 aaPredicted RBP20.29■□□□□ 0.84
SCARB2-203ENST00000502908 NMT1P30419 496 aaKnown RBP20.29■□□□□ 0.84
SCARB2-203ENST00000502908 CHADLQ6NUI6 762 aa20.29■□□□□ 0.84
SCARB2-203ENST00000502908 EPM2AIP1Q7L775 607 aaPredicted RBP20.29■□□□□ 0.84
SCARB2-203ENST00000502908 SLFN12Q8IYM2 578 aa20.29■□□□□ 0.84
SCARB2-203ENST00000502908 LENG9Q96B70 501 aa20.29■□□□□ 0.84
SCARB2-203ENST00000502908 NOVA2Q9UNW9 492 aaKnown RBP20.29■□□□□ 0.84
SCARB2-203ENST00000502908 BTNL10A8MVZ5 291 aa20.29■□□□□ 0.84
SCARB2-203ENST00000502908 TULP1O00294 542 aaPredicted RBP20.29■□□□□ 0.84
SCARB2-203ENST00000502908 EML1O00423 815 aa20.29■□□□□ 0.84
SCARB2-203ENST00000502908 CHMP2AO43633 222 aa20.29■□□□□ 0.84
SCARB2-203ENST00000502908 EVI5O60447 810 aa20.29■□□□□ 0.84
SCARB2-203ENST00000502908 FGGP02679 453 aa20.29■□□□□ 0.84
SCARB2-203ENST00000502908 ZNF211Q13398 564 aaPredicted RBP20.29■□□□□ 0.84
SCARB2-203ENST00000502908 CTTNQ14247 550 aaKnown RBP20.29■□□□□ 0.84
SCARB2-203ENST00000502908 QPCTQ16769 361 aa20.29■□□□□ 0.84
SCARB2-203ENST00000502908 SLFN13Q68D06 897 aa20.29■□□□□ 0.84
SCARB2-203ENST00000502908 NT5DC3Q86UY8 548 aa20.29■□□□□ 0.84
SCARB2-203ENST00000502908 SEPT11Q9NVA2 429 aaKnown RBP20.29■□□□□ 0.84
SCARB2-203ENST00000502908 SMCHD1A6NHR9 2005 aa20.28■□□□□ 0.84
SCARB2-203ENST00000502908 MNAT1P51948 309 aa20.28■□□□□ 0.84
SCARB2-203ENST00000502908 JAM2P57087 298 aa20.28■□□□□ 0.84
SCARB2-203ENST00000502908 CUL1Q13616 776 aa20.28■□□□□ 0.84
SCARB2-203ENST00000502908 SWAP70Q9UH65 585 aa20.28■□□□□ 0.84
SCARB2-203ENST00000502908 PPP1R9AQ9ULJ8 1098 aa20.28■□□□□ 0.84
SCARB2-203ENST00000502908 BUB1BO60566 1050 aaPredicted RBP20.28■□□□□ 0.84
SCARB2-203ENST00000502908 RPA1P27694 616 aa20.28■□□□□ 0.84
SCARB2-203ENST00000502908 HOXA7P31268 230 aaPredicted RBP20.28■□□□□ 0.84
SCARB2-203ENST00000502908 IFI16Q16666 785 aaKnown RBP20.28■□□□□ 0.84
SCARB2-203ENST00000502908 C10orf76Q5T2E6 689 aa20.28■□□□□ 0.84
SCARB2-203ENST00000502908 KCNQ5Q9NR82 932 aa20.28■□□□□ 0.84
SCARB2-203ENST00000502908 BZW2Q9Y6E2 419 aaKnown RBP20.28■□□□□ 0.84
SCARB2-203ENST00000502908 A6NNZ2 444 aa20.27■□□□□ 0.84
SCARB2-203ENST00000502908 PDXKO00764 312 aa20.27■□□□□ 0.84
SCARB2-203ENST00000502908 TBCAO75347 108 aaKnown RBP20.27■□□□□ 0.84
SCARB2-203ENST00000502908 GDF11O95390 407 aa20.27■□□□□ 0.84
SCARB2-203ENST00000502908 FNTAP49354 379 aa20.27■□□□□ 0.84
SCARB2-203ENST00000502908 DHX9Q08211 1270 aaKnown RBP20.27■□□□□ 0.84
SCARB2-203ENST00000502908 TUBB8Q3ZCM7 444 aa20.27■□□□□ 0.84
SCARB2-203ENST00000502908 AADACL2Q6P093 401 aa20.27■□□□□ 0.84
SCARB2-203ENST00000502908 CYFIP2Q96F07 1278 aa20.27■□□□□ 0.84
SCARB2-203ENST00000502908 TYW1Q9NV66 732 aaKnown RBP20.27■□□□□ 0.84
SCARB2-203ENST00000502908 STXBP5LQ9Y2K9 1186 aa20.27■□□□□ 0.84
SCARB2-203ENST00000502908 ATP8A1Q9Y2Q0 1164 aa20.27■□□□□ 0.84
SCARB2-203ENST00000502908 MSH4O15457 936 aa20.27■□□□□ 0.83
SCARB2-203ENST00000502908 TGFB1I1O43294 461 aa20.27■□□□□ 0.83
SCARB2-203ENST00000502908 FAM107AO95990 144 aa20.27■□□□□ 0.83
SCARB2-203ENST00000502908 HLA-DOAP06340 250 aa20.27■□□□□ 0.83
SCARB2-203ENST00000502908 TRIM49P0CI25 452 aa20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms