RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 UAP1Q16222 522 aaPredicted RBP14.22□□□□□ -0.13
PTPN7-217ENST00000495688 CERKLQ49MI3 558 aaPredicted RBP14.22□□□□□ -0.13
PTPN7-217ENST00000495688 ZC2HC1CQ53FD0 456 aaPredicted RBP14.22□□□□□ -0.13
PTPN7-217ENST00000495688 SP8Q8IXZ3 490 aa14.22□□□□□ -0.13
PTPN7-217ENST00000495688 WHAMMQ8TF30 809 aa14.22□□□□□ -0.13
PTPN7-217ENST00000495688 DBNDD1Q9H9R9 158 aa14.22□□□□□ -0.13
PTPN7-217ENST00000495688 F5H6K3 240 aa14.21□□□□□ -0.13
PTPN7-217ENST00000495688 OPLAHO14841 1288 aa14.21□□□□□ -0.13
PTPN7-217ENST00000495688 NMT1P30419 496 aaKnown RBP14.21□□□□□ -0.13
PTPN7-217ENST00000495688 HSD17B3P37058 310 aa14.21□□□□□ -0.13
PTPN7-217ENST00000495688 KLRC3Q07444 240 aa14.21□□□□□ -0.13
PTPN7-217ENST00000495688 CTTNQ14247 550 aaKnown RBP14.21□□□□□ -0.13
PTPN7-217ENST00000495688 COG2Q14746 738 aa14.21□□□□□ -0.13
PTPN7-217ENST00000495688 KDM7AQ6ZMT4 941 aa14.21□□□□□ -0.13
PTPN7-217ENST00000495688 SH3BP5LQ7L8J4 393 aa14.21□□□□□ -0.13
PTPN7-217ENST00000495688 U2AF1L4Q8WU68 220 aaKnown RBP14.21□□□□□ -0.13
PTPN7-217ENST00000495688 KAT2BQ92831 832 aa14.21□□□□□ -0.13
PTPN7-217ENST00000495688 ISCUQ9H1K1 167 aa14.21□□□□□ -0.13
PTPN7-217ENST00000495688 OSGEPQ9NPF4 335 aa14.21□□□□□ -0.13
PTPN7-217ENST00000495688 A0A087WUV0 522 aaPredicted RBP14.21□□□□□ -0.13
PTPN7-217ENST00000495688 SPDYE3A6NKU9 549 aa14.21□□□□□ -0.13
PTPN7-217ENST00000495688 BTNL10A8MVZ5 291 aa14.21□□□□□ -0.13
PTPN7-217ENST00000495688 TGFB1I1O43294 461 aa14.21□□□□□ -0.13
PTPN7-217ENST00000495688 ADRA2BP18089 450 aa14.21□□□□□ -0.13
PTPN7-217ENST00000495688 CRKP46108 304 aa14.21□□□□□ -0.13
PTPN7-217ENST00000495688 JAM2P57087 298 aa14.21□□□□□ -0.13
PTPN7-217ENST00000495688 JAG1P78504 1218 aa14.21□□□□□ -0.13
PTPN7-217ENST00000495688 PEX26Q7Z412 305 aa14.21□□□□□ -0.13
PTPN7-217ENST00000495688 DAAM2Q86T65 1068 aa14.21□□□□□ -0.13
PTPN7-217ENST00000495688 ERMNQ8TAM6 284 aa14.21□□□□□ -0.13
PTPN7-217ENST00000495688 ATP6V1G3Q96LB4 118 aa14.21□□□□□ -0.13
PTPN7-217ENST00000495688 CELF4Q9BZC1 486 aaKnown RBP14.21□□□□□ -0.13
PTPN7-217ENST00000495688 TYW1Q9NV66 732 aaKnown RBP14.21□□□□□ -0.13
PTPN7-217ENST00000495688 VAV3Q9UKW4 847 aa14.21□□□□□ -0.13
PTPN7-217ENST00000495688 UTRNP46939 3433 aa14.21□□□□□ -0.14
PTPN7-217ENST00000495688 CALUO43852 315 aaPredicted RBP14.2□□□□□ -0.14
PTPN7-217ENST00000495688 FLOT1O75955 427 aa14.2□□□□□ -0.14
PTPN7-217ENST00000495688 HSPA9P38646 679 aaKnown RBP14.2□□□□□ -0.14
PTPN7-217ENST00000495688 PRKCIP41743 596 aa14.2□□□□□ -0.14
PTPN7-217ENST00000495688 AP3B2Q13367 1082 aa14.2□□□□□ -0.14
PTPN7-217ENST00000495688 SPICE1Q8N0Z3 855 aa14.2□□□□□ -0.14
PTPN7-217ENST00000495688 ACTRT1Q8TDG2 376 aa14.2□□□□□ -0.14
PTPN7-217ENST00000495688 EIF2AK1Q9BQI3 630 aaKnown RBP14.2□□□□□ -0.14
PTPN7-217ENST00000495688 AMNQ9BXJ7 453 aa14.2□□□□□ -0.14
PTPN7-217ENST00000495688 SUGT1Q9Y2Z0 365 aa14.2□□□□□ -0.14
PTPN7-217ENST00000495688 NR2E1Q9Y466 385 aa14.2□□□□□ -0.14
PTPN7-217ENST00000495688 PGRMC1O00264 195 aaKnown RBP14.2□□□□□ -0.14
PTPN7-217ENST00000495688 KRIT1O00522 736 aa14.2□□□□□ -0.14
PTPN7-217ENST00000495688 DAPK3O43293 454 aa14.2□□□□□ -0.14
PTPN7-217ENST00000495688 CHMP2AO43633 222 aa14.2□□□□□ -0.14
PTPN7-217ENST00000495688 H2AFZP0C0S5 128 aa14.2□□□□□ -0.14
PTPN7-217ENST00000495688 RBM5P52756 815 aaKnown RBP eCLIP14.2□□□□□ -0.14
PTPN7-217ENST00000495688 ICA1Q05084 483 aa14.2□□□□□ -0.14
PTPN7-217ENST00000495688 Q4G0T1 1027 aa14.2□□□□□ -0.14
PTPN7-217ENST00000495688 NAA35Q5VZE5 725 aa14.2□□□□□ -0.14
PTPN7-217ENST00000495688 H2AFVQ71UI9 128 aa14.2□□□□□ -0.14
PTPN7-217ENST00000495688 FBXO11Q86XK2 927 aa14.2□□□□□ -0.14
PTPN7-217ENST00000495688 GLYCTKQ8IVS8 523 aa14.2□□□□□ -0.14
PTPN7-217ENST00000495688 LNX1Q8TBB1 728 aaPredicted RBP14.2□□□□□ -0.14
PTPN7-217ENST00000495688 MKL1Q969V6 931 aa14.2□□□□□ -0.14
PTPN7-217ENST00000495688 CCDC17Q96LX7 622 aa14.2□□□□□ -0.14
PTPN7-217ENST00000495688 FAM107BQ9H098 131 aa14.2□□□□□ -0.14
PTPN7-217ENST00000495688 GLT8D2Q9H1C3 349 aa14.2□□□□□ -0.14
PTPN7-217ENST00000495688 LRRC4CQ9HCJ2 640 aa14.2□□□□□ -0.14
PTPN7-217ENST00000495688 FAM198AQ9UFP1 575 aa14.2□□□□□ -0.14
PTPN7-217ENST00000495688 NENFQ9UMX5 172 aa14.2□□□□□ -0.14
PTPN7-217ENST00000495688 BCS1LQ9Y276 419 aa14.2□□□□□ -0.14
PTPN7-217ENST00000495688 BZW2Q9Y6E2 419 aaKnown RBP14.2□□□□□ -0.14
PTPN7-217ENST00000495688 UBR3Q6ZT12 1888 aa14.2□□□□□ -0.14
PTPN7-217ENST00000495688 G3V3G9 751 aa14.19□□□□□ -0.14
PTPN7-217ENST00000495688 EVI5O60447 810 aa14.19□□□□□ -0.14
PTPN7-217ENST00000495688 TBCAO75347 108 aaKnown RBP14.19□□□□□ -0.14
PTPN7-217ENST00000495688 NDUFB10O96000 172 aa14.19□□□□□ -0.14
PTPN7-217ENST00000495688 SREBF1P36956 1147 aa14.19□□□□□ -0.14
PTPN7-217ENST00000495688 GALCP54803 685 aa14.19□□□□□ -0.14
PTPN7-217ENST00000495688 ITGB3BPQ13352 177 aaPredicted RBP14.19□□□□□ -0.14
PTPN7-217ENST00000495688 C10orf76Q5T2E6 689 aa14.19□□□□□ -0.14
PTPN7-217ENST00000495688 DCAF8Q5TAQ9 597 aa14.19□□□□□ -0.14
PTPN7-217ENST00000495688 MOXD1Q6UVY6 613 aa14.19□□□□□ -0.14
PTPN7-217ENST00000495688 HHIPL2Q6UWX4 724 aa14.19□□□□□ -0.14
PTPN7-217ENST00000495688 CD302Q8IX05 232 aa14.19□□□□□ -0.14
PTPN7-217ENST00000495688 OLIG1Q8TAK6 271 aa14.19□□□□□ -0.14
PTPN7-217ENST00000495688 DCAF4Q8WV16 495 aa14.19□□□□□ -0.14
PTPN7-217ENST00000495688 PBKQ96KB5 322 aa14.19□□□□□ -0.14
PTPN7-217ENST00000495688 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.19□□□□□ -0.14
PTPN7-217ENST00000495688 RABGAP1Q9Y3P9 1069 aa14.19□□□□□ -0.14
PTPN7-217ENST00000495688 ZMYM2Q9UBW7 1377 aa14.19□□□□□ -0.14
PTPN7-217ENST00000495688 IGSF9BQ9UPX0 1349 aa14.19□□□□□ -0.14
PTPN7-217ENST00000495688 TTI1O43156 1089 aa14.19□□□□□ -0.14
PTPN7-217ENST00000495688 ERLIN2O94905 339 aa14.19□□□□□ -0.14
PTPN7-217ENST00000495688 ABCB4P21439 1286 aa14.19□□□□□ -0.14
PTPN7-217ENST00000495688 COPB2P35606 906 aa14.19□□□□□ -0.14
PTPN7-217ENST00000495688 UBXN2AP68543 259 aa14.19□□□□□ -0.14
PTPN7-217ENST00000495688 RINT1Q6NUQ1 792 aa14.19□□□□□ -0.14
PTPN7-217ENST00000495688 ADAT2Q7Z6V5 191 aaKnown RBP14.19□□□□□ -0.14
PTPN7-217ENST00000495688 BORCS6Q96GS4 357 aa14.19□□□□□ -0.14
PTPN7-217ENST00000495688 NYAP2Q9P242 653 aa14.19□□□□□ -0.14
PTPN7-217ENST00000495688 SIPA1L1O43166 1804 aa14.19□□□□□ -0.14
PTPN7-217ENST00000495688 LTBP4Q8N2S1 1624 aa14.18□□□□□ -0.14
PTPN7-217ENST00000495688 H0YGN5 161 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms