RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 NME8Q8N427 588 aa10.87□□□□□ -0.67
MSH5-218ENST00000494646 FIBCD1Q8N539 461 aa10.87□□□□□ -0.67
MSH5-218ENST00000494646 IL27Q8NEV9 243 aa10.87□□□□□ -0.67
MSH5-218ENST00000494646 SP7Q8TDD2 431 aaPredicted RBP10.87□□□□□ -0.67
MSH5-218ENST00000494646 PPP1R16BQ96T49 567 aa10.87□□□□□ -0.67
MSH5-218ENST00000494646 SH3GLB2Q9NR46 395 aa10.87□□□□□ -0.67
MSH5-218ENST00000494646 LMCD1Q9NZU5 365 aa10.87□□□□□ -0.67
MSH5-218ENST00000494646 TCEAL9Q9UHQ7 104 aa10.87□□□□□ -0.67
MSH5-218ENST00000494646 PCDHA4Q9UN74 947 aa10.87□□□□□ -0.67
MSH5-218ENST00000494646 PCDHA10Q9Y5I2 948 aa10.87□□□□□ -0.67
MSH5-218ENST00000494646 MAFBQ9Y5Q3 323 aaPredicted RBP10.87□□□□□ -0.67
MSH5-218ENST00000494646 TTC28Q96AY4 2481 aa10.87□□□□□ -0.67
MSH5-218ENST00000494646 BRWD1Q9NSI6 2320 aa10.86□□□□□ -0.67
MSH5-218ENST00000494646 CHMP2AO43633 222 aa10.86□□□□□ -0.67
MSH5-218ENST00000494646 BMP1P13497 986 aa10.86□□□□□ -0.67
MSH5-218ENST00000494646 SETQ01105 290 aaPredicted RBP10.86□□□□□ -0.67
MSH5-218ENST00000494646 PAK2Q13177 524 aa10.86□□□□□ -0.67
MSH5-218ENST00000494646 KIAA0319LQ8IZA0 1049 aa10.86□□□□□ -0.67
MSH5-218ENST00000494646 METTL13Q8N6R0 699 aa10.86□□□□□ -0.67
MSH5-218ENST00000494646 ADAMTS19Q8TE59 1207 aa10.86□□□□□ -0.67
MSH5-218ENST00000494646 LINC01599Q8WXQ3 324 aa10.86□□□□□ -0.67
MSH5-218ENST00000494646 HLA-CQ95604 372 aa10.86□□□□□ -0.67
MSH5-218ENST00000494646 LENG9Q96B70 501 aa10.86□□□□□ -0.67
MSH5-218ENST00000494646 NECAB3Q96P71 396 aaPredicted RBP10.86□□□□□ -0.67
MSH5-218ENST00000494646 SLKQ9H2G2 1235 aaPredicted RBP10.86□□□□□ -0.67
MSH5-218ENST00000494646 GJB4Q9NTQ9 266 aa10.86□□□□□ -0.67
MSH5-218ENST00000494646 TPCN1Q9ULQ1 816 aa10.86□□□□□ -0.67
MSH5-218ENST00000494646 NOC2LQ9Y3T9 749 aaKnown RBP10.86□□□□□ -0.67
MSH5-218ENST00000494646 BDP1A6H8Y1 2624 aa10.86□□□□□ -0.67
MSH5-218ENST00000494646 NCOR1O75376 2440 aa10.85□□□□□ -0.67
MSH5-218ENST00000494646 ZBTB42B2RXF5 422 aa10.85□□□□□ -0.67
MSH5-218ENST00000494646 TNFRSF10AO00220 468 aa10.85□□□□□ -0.67
MSH5-218ENST00000494646 RPS6KA5O75582 802 aa10.85□□□□□ -0.67
MSH5-218ENST00000494646 TDP2O95551 362 aa10.85□□□□□ -0.67
MSH5-218ENST00000494646 VTNP04004 478 aa10.85□□□□□ -0.67
MSH5-218ENST00000494646 RPLP2P05387 115 aaKnown RBP10.85□□□□□ -0.67
MSH5-218ENST00000494646 BTG3Q14201 252 aaPredicted RBP10.85□□□□□ -0.67
MSH5-218ENST00000494646 SMAP1Q8IYB5 467 aaPredicted RBP10.85□□□□□ -0.67
MSH5-218ENST00000494646 NECAB1Q8N987 351 aa10.85□□□□□ -0.67
MSH5-218ENST00000494646 ZNF668Q96K58 619 aaPredicted RBP10.85□□□□□ -0.67
MSH5-218ENST00000494646 UHRF1Q96T88 793 aaPredicted RBP10.85□□□□□ -0.67
MSH5-218ENST00000494646 TEKT3Q9BXF9 490 aa10.85□□□□□ -0.67
MSH5-218ENST00000494646 TMX1Q9H3N1 280 aa10.85□□□□□ -0.67
MSH5-218ENST00000494646 UNC45AQ9H3U1 944 aa10.85□□□□□ -0.67
MSH5-218ENST00000494646 DISC1Q9NRI5 854 aa10.85□□□□□ -0.67
MSH5-218ENST00000494646 NRBP2Q9NSY0 501 aa10.85□□□□□ -0.67
MSH5-218ENST00000494646 COG5Q9UP83 839 aa10.85□□□□□ -0.67
MSH5-218ENST00000494646 RALGAPA2Q2PPJ7 1873 aa10.85□□□□□ -0.67
MSH5-218ENST00000494646 IGSF9BQ9UPX0 1349 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 WDR64B1ANS9 1081 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 H3BNC9 293 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 M0R2N6 131 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 ZNF862O60290 1169 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 MGEA5O60502 916 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 PFKFB2O60825 505 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 GAS7O60861 476 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 DGKIO75912 1065 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 CSPG5O95196 566 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 SEC24BO95487 1268 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 C22orf31O95567 290 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 CTNNB1P35222 781 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 GATMP50440 423 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 CLCN3P51790 818 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 AK2P54819 239 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 NPY5RQ15761 445 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 INF2Q27J81 1249 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 AAK1Q2M2I8 961 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 KIZQ2M2Z5 673 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 Q4G0T1 1027 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 PAN2Q504Q3 1202 aaKnown RBP10.84□□□□□ -0.67
MSH5-218ENST00000494646 LRCH2Q5VUJ6 765 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 ERICH6BQ5W0A0 696 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 EFCAB12Q6NXP0 572 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 MIER3Q7Z3K6 550 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 SLC5A5Q92911 643 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 ZNF689Q96CS4 500 aaPredicted RBP10.84□□□□□ -0.67
MSH5-218ENST00000494646 SAMD11Q96NU1 681 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 OSMRQ99650 979 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 SH2D3AQ9BRG2 576 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 FTHL17Q9BXU8 183 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 C22orf23Q9BZE7 217 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 ST3GAL5Q9UNP4 418 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 SQORQ9Y6N5 450 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 COL1A2P08123 1366 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 KIAA1671Q9BY89 1806 aa10.84□□□□□ -0.67
MSH5-218ENST00000494646 C5orf42Q9H799 3197 aa10.83□□□□□ -0.68
MSH5-218ENST00000494646 FNDC1Q4ZHG4 1894 aaPredicted RBP10.83□□□□□ -0.68
MSH5-218ENST00000494646 CYP3A7-CYP3A51PA0A087WV96 503 aa10.83□□□□□ -0.68
MSH5-218ENST00000494646 PSMD10O75832 226 aa10.83□□□□□ -0.68
MSH5-218ENST00000494646 CTDNEP1O95476 244 aa10.83□□□□□ -0.68
MSH5-218ENST00000494646 CYP3A7P24462 503 aa10.83□□□□□ -0.68
MSH5-218ENST00000494646 BMPR1AP36894 532 aa10.83□□□□□ -0.68
MSH5-218ENST00000494646 NLRP11P59045 1033 aaKnown RBP10.83□□□□□ -0.68
MSH5-218ENST00000494646 NONOQ15233 471 aaKnown RBP eCLIP10.83□□□□□ -0.68
MSH5-218ENST00000494646 UGCGQ16739 394 aa10.83□□□□□ -0.68
MSH5-218ENST00000494646 PTPROQ16827 1216 aa10.83□□□□□ -0.68
MSH5-218ENST00000494646 LETM2Q2VYF4 491 aa10.83□□□□□ -0.68
MSH5-218ENST00000494646 EP400NLQ6ZTU2 488 aa10.83□□□□□ -0.68
MSH5-218ENST00000494646 LRRC71Q8N4P6 559 aa10.83□□□□□ -0.68
MSH5-218ENST00000494646 BANK1Q8NDB2 785 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms