RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 C16orf70Q9BSU1 422 aa13.88□□□□□ -0.19
SNX17-208ENST00000493711 CRISPLD2Q9H0B8 497 aa13.88□□□□□ -0.19
SNX17-208ENST00000493711 DDX19AQ9NUU7 478 aaKnown RBP13.88□□□□□ -0.19
SNX17-208ENST00000493711 HOOK1Q9UJC3 728 aaKnown RBP13.88□□□□□ -0.19
SNX17-208ENST00000493711 POTEB3A0JP26 581 aa13.87□□□□□ -0.19
SNX17-208ENST00000493711 RRN3P2A6NIE6 340 aa13.87□□□□□ -0.19
SNX17-208ENST00000493711 KINO60870 393 aaKnown RBP13.87□□□□□ -0.19
SNX17-208ENST00000493711 EYA4O95677 639 aa13.87□□□□□ -0.19
SNX17-208ENST00000493711 TFRCP02786 760 aaKnown RBP13.87□□□□□ -0.19
SNX17-208ENST00000493711 SLFN14P0C7P3 912 aa13.87□□□□□ -0.19
SNX17-208ENST00000493711 PLCG1P19174 1290 aa13.87□□□□□ -0.19
SNX17-208ENST00000493711 YWHABP31946 246 aaKnown RBP13.87□□□□□ -0.19
SNX17-208ENST00000493711 NDUFA8P51970 172 aa13.87□□□□□ -0.19
SNX17-208ENST00000493711 PURAQ00577 322 aaKnown RBP13.87□□□□□ -0.19
SNX17-208ENST00000493711 BEX3Q00994 111 aa13.87□□□□□ -0.19
SNX17-208ENST00000493711 AMPD3Q01432 767 aa13.87□□□□□ -0.19
SNX17-208ENST00000493711 KCNA10Q16322 511 aa13.87□□□□□ -0.19
SNX17-208ENST00000493711 POTEBQ6S5H4 581 aa13.87□□□□□ -0.19
SNX17-208ENST00000493711 U2AF1L4Q8WU68 220 aaKnown RBP13.87□□□□□ -0.19
SNX17-208ENST00000493711 TIGD1Q96MW7 591 aa13.87□□□□□ -0.19
SNX17-208ENST00000493711 PNMA5Q96PV4 448 aa13.87□□□□□ -0.19
SNX17-208ENST00000493711 JPH2Q9BR39 696 aaPredicted RBP13.87□□□□□ -0.19
SNX17-208ENST00000493711 NIFKQ9BYG3 293 aaKnown RBP13.87□□□□□ -0.19
SNX17-208ENST00000493711 KCND2Q9NZV8 630 aa13.87□□□□□ -0.19
SNX17-208ENST00000493711 COL1A2P08123 1366 aa13.86□□□□□ -0.19
SNX17-208ENST00000493711 POLR2DO15514 142 aaKnown RBP13.86□□□□□ -0.19
SNX17-208ENST00000493711 ZNF862O60290 1169 aa13.86□□□□□ -0.19
SNX17-208ENST00000493711 GADD45BO75293 160 aaPredicted RBP13.86□□□□□ -0.19
SNX17-208ENST00000493711 ZNF202O95125 648 aa13.86□□□□□ -0.19
SNX17-208ENST00000493711 MYL1P05976 194 aa13.86□□□□□ -0.19
SNX17-208ENST00000493711 ASGR1P07306 291 aa13.86□□□□□ -0.19
SNX17-208ENST00000493711 GNAT1P11488 350 aa13.86□□□□□ -0.19
SNX17-208ENST00000493711 GJA8P48165 433 aa13.86□□□□□ -0.19
SNX17-208ENST00000493711 PSEN2P49810 448 aa13.86□□□□□ -0.19
SNX17-208ENST00000493711 ACLYP53396 1101 aa13.86□□□□□ -0.19
SNX17-208ENST00000493711 MFSD10Q14728 455 aa13.86□□□□□ -0.19
SNX17-208ENST00000493711 PLCB4Q15147 1175 aa13.86□□□□□ -0.19
SNX17-208ENST00000493711 UGCGQ16739 394 aa13.86□□□□□ -0.19
SNX17-208ENST00000493711 ZNF484Q5JVG2 852 aa13.86□□□□□ -0.19
SNX17-208ENST00000493711 POTEGQ6S5H5 508 aa13.86□□□□□ -0.19
SNX17-208ENST00000493711 SV2BQ7L1I2 683 aa13.86□□□□□ -0.19
SNX17-208ENST00000493711 ELOA2Q8IYF1 753 aaPredicted RBP13.86□□□□□ -0.19
SNX17-208ENST00000493711 FMR1NBQ8N0W7 255 aaPredicted RBP13.86□□□□□ -0.19
SNX17-208ENST00000493711 PDILTQ8N807 584 aa13.86□□□□□ -0.19
SNX17-208ENST00000493711 ENGASEQ8NFI3 743 aa13.86□□□□□ -0.19
SNX17-208ENST00000493711 LARP4BQ92615 738 aaKnown RBP13.86□□□□□ -0.19
SNX17-208ENST00000493711 RAD54LQ92698 747 aa13.86□□□□□ -0.19
SNX17-208ENST00000493711 DHX58Q96C10 678 aa13.86□□□□□ -0.19
SNX17-208ENST00000493711 GLT1D1Q96MS3 346 aa13.86□□□□□ -0.19
SNX17-208ENST00000493711 MFRPQ9BY79 579 aa13.86□□□□□ -0.19
SNX17-208ENST00000493711 GOLPH3LQ9H4A5 285 aa13.86□□□□□ -0.19
SNX17-208ENST00000493711 PHF24Q9UPV7 400 aa13.86□□□□□ -0.19
SNX17-208ENST00000493711 DOCK3Q8IZD9 2030 aa13.86□□□□□ -0.19
SNX17-208ENST00000493711 ARHGEF35A5YM69 484 aa13.85□□□□□ -0.19
SNX17-208ENST00000493711 MYADML2A6NDP7 307 aa13.85□□□□□ -0.19
SNX17-208ENST00000493711 HAS3O00219 553 aa13.85□□□□□ -0.19
SNX17-208ENST00000493711 ZNF286BP0CG31 522 aa13.85□□□□□ -0.19
SNX17-208ENST00000493711 PTGS1P23219 599 aa13.85□□□□□ -0.19
SNX17-208ENST00000493711 RFC5P40937 340 aa13.85□□□□□ -0.19
SNX17-208ENST00000493711 PTPN11Q06124 597 aaPredicted RBP13.85□□□□□ -0.19
SNX17-208ENST00000493711 E2F4Q16254 413 aa13.85□□□□□ -0.19
SNX17-208ENST00000493711 KIAA0753Q2KHM9 967 aa13.85□□□□□ -0.19
SNX17-208ENST00000493711 TRIM50Q86XT4 487 aa13.85□□□□□ -0.19
SNX17-208ENST00000493711 C7orf31Q8N865 590 aa13.85□□□□□ -0.19
SNX17-208ENST00000493711 CNNM3Q8NE01 707 aa13.85□□□□□ -0.19
SNX17-208ENST00000493711 KAT2BQ92831 832 aa13.85□□□□□ -0.19
SNX17-208ENST00000493711 TIPINQ9BVW5 301 aa13.85□□□□□ -0.19
SNX17-208ENST00000493711 PANK2Q9BZ23 570 aa13.85□□□□□ -0.19
SNX17-208ENST00000493711 TNMDQ9H2S6 317 aa13.85□□□□□ -0.19
SNX17-208ENST00000493711 SEPT9Q9UHD8 586 aaPredicted RBP13.85□□□□□ -0.19
SNX17-208ENST00000493711 TELO2Q9Y4R8 837 aa13.85□□□□□ -0.19
SNX17-208ENST00000493711 NRCAMQ92823 1304 aa13.85□□□□□ -0.19
SNX17-208ENST00000493711 MAGEB2O15479 319 aa13.84□□□□□ -0.19
SNX17-208ENST00000493711 GAS2O43903 313 aaKnown RBP13.84□□□□□ -0.19
SNX17-208ENST00000493711 MYCP01106 439 aaPredicted RBP13.84□□□□□ -0.19
SNX17-208ENST00000493711 PLA2G4BP0C869 781 aa13.84□□□□□ -0.19
SNX17-208ENST00000493711 PPFIA1Q13136 1202 aa13.84□□□□□ -0.19
SNX17-208ENST00000493711 SNW1Q13573 536 aaKnown RBP13.84□□□□□ -0.19
SNX17-208ENST00000493711 ECM1Q16610 540 aa13.84□□□□□ -0.19
SNX17-208ENST00000493711 TPRNQ4KMQ1 711 aa13.84□□□□□ -0.19
SNX17-208ENST00000493711 XKR9Q5GH70 373 aa13.84□□□□□ -0.19
SNX17-208ENST00000493711 NFRKBQ6P4R8 1299 aa13.84□□□□□ -0.19
SNX17-208ENST00000493711 CXCL17Q6UXB2 119 aa13.84□□□□□ -0.19
SNX17-208ENST00000493711 KRBA2Q6ZNG9 492 aa13.84□□□□□ -0.19
SNX17-208ENST00000493711 ANO5Q75V66 913 aa13.84□□□□□ -0.19
SNX17-208ENST00000493711 SYT2Q8N9I0 419 aaPredicted RBP13.84□□□□□ -0.19
SNX17-208ENST00000493711 FBXO22Q8NEZ5 403 aa13.84□□□□□ -0.19
SNX17-208ENST00000493711 PIGOQ8TEQ8 1089 aa13.84□□□□□ -0.19
SNX17-208ENST00000493711 SYAP1Q96A49 352 aaPredicted RBP13.84□□□□□ -0.19
SNX17-208ENST00000493711 VTI1AQ96AJ9 217 aa13.84□□□□□ -0.19
SNX17-208ENST00000493711 CEP170P1Q96L14 293 aa13.84□□□□□ -0.19
SNX17-208ENST00000493711 PLIN2Q99541 437 aa13.84□□□□□ -0.19
SNX17-208ENST00000493711 BHMT2Q9H2M3 363 aa13.84□□□□□ -0.19
SNX17-208ENST00000493711 CYP26B1Q9NR63 512 aa13.84□□□□□ -0.19
SNX17-208ENST00000493711 BLOC1S4Q9NUP1 217 aa13.84□□□□□ -0.19
SNX17-208ENST00000493711 WRAP73Q9P2S5 460 aaPredicted RBP13.84□□□□□ -0.19
SNX17-208ENST00000493711 A0A087X0B3 334 aa13.83□□□□□ -0.2
SNX17-208ENST00000493711 A0A0U1RQG5 324 aaPredicted RBP13.83□□□□□ -0.2
SNX17-208ENST00000493711 E9PMD0 336 aa13.83□□□□□ -0.2
SNX17-208ENST00000493711 DGAT1O75907 488 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms