RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 ZNF713Q8N859 430 aaPredicted RBP13.25□□□□□ -0.29
VARS2-208ENST00000477052 KCNB2Q92953 911 aa13.25□□□□□ -0.29
VARS2-208ENST00000477052 CLP1Q92989 425 aaKnown RBP13.25□□□□□ -0.29
VARS2-208ENST00000477052 PABPC5Q96DU9 382 aaKnown RBP13.25□□□□□ -0.29
VARS2-208ENST00000477052 C11orf84Q9BUA3 381 aaPredicted RBP13.25□□□□□ -0.29
VARS2-208ENST00000477052 SLC26A6Q9BXS9 759 aa13.25□□□□□ -0.29
VARS2-208ENST00000477052 PLAGL2Q9UPG8 496 aa13.25□□□□□ -0.29
VARS2-208ENST00000477052 EVPLQ92817 2033 aa13.25□□□□□ -0.29
VARS2-208ENST00000477052 PRPF3O43395 683 aaKnown RBP13.24□□□□□ -0.29
VARS2-208ENST00000477052 EDIL3O43854 480 aa13.24□□□□□ -0.29
VARS2-208ENST00000477052 HBP1O60381 514 aa13.24□□□□□ -0.29
VARS2-208ENST00000477052 ITGB1P05556 798 aa13.24□□□□□ -0.29
VARS2-208ENST00000477052 RB1P06400 928 aa13.24□□□□□ -0.29
VARS2-208ENST00000477052 CYP3A4P08684 503 aa13.24□□□□□ -0.29
VARS2-208ENST00000477052 CLCN3P51790 818 aa13.24□□□□□ -0.29
VARS2-208ENST00000477052 TMEM31Q5JXX7 168 aa13.24□□□□□ -0.29
VARS2-208ENST00000477052 FAM102BQ5T8I3 360 aa13.24□□□□□ -0.29
VARS2-208ENST00000477052 MIS18BP1Q6P0N0 1132 aa13.24□□□□□ -0.29
VARS2-208ENST00000477052 NIPA1Q7RTP0 329 aa13.24□□□□□ -0.29
VARS2-208ENST00000477052 ADGRD2Q7Z7M1 963 aa13.24□□□□□ -0.29
VARS2-208ENST00000477052 METTL13Q8N6R0 699 aa13.24□□□□□ -0.29
VARS2-208ENST00000477052 KLHL23Q8NBE8 558 aa13.24□□□□□ -0.29
VARS2-208ENST00000477052 OSMRQ99650 979 aa13.24□□□□□ -0.29
VARS2-208ENST00000477052 ADAM2Q99965 735 aa13.24□□□□□ -0.29
VARS2-208ENST00000477052 ZMYND12Q9H0C1 365 aa13.24□□□□□ -0.29
VARS2-208ENST00000477052 C6orf50Q9HD87 102 aa13.24□□□□□ -0.29
VARS2-208ENST00000477052 ERVK-5Q9HDB9 667 aa13.24□□□□□ -0.29
VARS2-208ENST00000477052 GABBR1Q9UBS5 961 aa13.24□□□□□ -0.29
VARS2-208ENST00000477052 LRFN2Q9ULH4 789 aa13.24□□□□□ -0.29
VARS2-208ENST00000477052 CCDC196A0A1B0GTZ2 297 aa13.23□□□□□ -0.29
VARS2-208ENST00000477052 PI4K2BG5E9Z4 385 aa13.23□□□□□ -0.29
VARS2-208ENST00000477052 TBX10O75333 385 aa13.23□□□□□ -0.29
VARS2-208ENST00000477052 RPS6KA5O75582 802 aa13.23□□□□□ -0.29
VARS2-208ENST00000477052 C22orf31O95567 290 aa13.23□□□□□ -0.29
VARS2-208ENST00000477052 COL19A1Q14993 1142 aa13.23□□□□□ -0.29
VARS2-208ENST00000477052 NTRK3Q16288 839 aa13.23□□□□□ -0.29
VARS2-208ENST00000477052 RBM23Q86U06 439 aaKnown RBP13.23□□□□□ -0.29
VARS2-208ENST00000477052 CMTR2Q8IYT2 770 aaKnown RBP13.23□□□□□ -0.29
VARS2-208ENST00000477052 SPPL3Q8TCT6 385 aa13.23□□□□□ -0.29
VARS2-208ENST00000477052 TNPO1Q92973 898 aaKnown RBP13.23□□□□□ -0.29
VARS2-208ENST00000477052 LENG9Q96B70 501 aa13.23□□□□□ -0.29
VARS2-208ENST00000477052 FTHL17Q9BXU8 183 aa13.23□□□□□ -0.29
VARS2-208ENST00000477052 GLT8D2Q9H1C3 349 aa13.23□□□□□ -0.29
VARS2-208ENST00000477052 ST3GAL5Q9UNP4 418 aa13.23□□□□□ -0.29
VARS2-208ENST00000477052 SAMM50Q9Y512 469 aa13.23□□□□□ -0.29
VARS2-208ENST00000477052 C5orf42Q9H799 3197 aa13.23□□□□□ -0.29
VARS2-208ENST00000477052 KDM3AQ9Y4C1 1321 aa13.22□□□□□ -0.29
VARS2-208ENST00000477052 ESYT2A0FGR8 921 aa13.22□□□□□ -0.29
VARS2-208ENST00000477052 DENND3A2RUS2 1198 aa13.22□□□□□ -0.29
VARS2-208ENST00000477052 TBKBP1A7MCY6 615 aa13.22□□□□□ -0.29
VARS2-208ENST00000477052 CHMP2AO43633 222 aa13.22□□□□□ -0.29
VARS2-208ENST00000477052 MMP1P03956 469 aa13.22□□□□□ -0.29
VARS2-208ENST00000477052 STAG3L1P0CL83 205 aa13.22□□□□□ -0.29
VARS2-208ENST00000477052 FGFR1P11362 822 aa13.22□□□□□ -0.29
VARS2-208ENST00000477052 PDIA3P30101 505 aaKnown RBP13.22□□□□□ -0.29
VARS2-208ENST00000477052 SLC26A2P50443 739 aa13.22□□□□□ -0.29
VARS2-208ENST00000477052 RCAN1P53805 252 aa13.22□□□□□ -0.29
VARS2-208ENST00000477052 RBM10P98175 930 aaKnown RBP13.22□□□□□ -0.29
VARS2-208ENST00000477052 AKAP17AQ02040 695 aaKnown RBP13.22□□□□□ -0.29
VARS2-208ENST00000477052 UGCGQ16739 394 aa13.22□□□□□ -0.29
VARS2-208ENST00000477052 CTC1Q2NKJ3 1217 aa13.22□□□□□ -0.29
VARS2-208ENST00000477052 ZNF484Q5JVG2 852 aa13.22□□□□□ -0.29
VARS2-208ENST00000477052 FAM228AQ86W67 206 aa13.22□□□□□ -0.29
VARS2-208ENST00000477052 NME8Q8N427 588 aa13.22□□□□□ -0.29
VARS2-208ENST00000477052 LRRC71Q8N4P6 559 aa13.22□□□□□ -0.29
VARS2-208ENST00000477052 POF1BQ8WVV4 589 aa13.22□□□□□ -0.29
VARS2-208ENST00000477052 CCDC136Q96JN2 1154 aa13.22□□□□□ -0.29
VARS2-208ENST00000477052 RWDD3Q9Y3V2 267 aa13.22□□□□□ -0.29
VARS2-208ENST00000477052 PCDHB7Q9Y5E2 793 aa13.22□□□□□ -0.29
VARS2-208ENST00000477052 MAFBQ9Y5Q3 323 aaPredicted RBP13.22□□□□□ -0.29
VARS2-208ENST00000477052 SQORQ9Y6N5 450 aa13.22□□□□□ -0.29
VARS2-208ENST00000477052 TMEM150BA6NC51 233 aa13.21□□□□□ -0.29
VARS2-208ENST00000477052 MSH4O15457 936 aa13.21□□□□□ -0.29
VARS2-208ENST00000477052 ZNF862O60290 1169 aa13.21□□□□□ -0.29
VARS2-208ENST00000477052 GPR32O75388 356 aa13.21□□□□□ -0.29
VARS2-208ENST00000477052 PSAPP07602 524 aa13.21□□□□□ -0.29
VARS2-208ENST00000477052 FGFR4P22455 802 aa13.21□□□□□ -0.29
VARS2-208ENST00000477052 NRIP1P48552 1158 aa13.21□□□□□ -0.29
VARS2-208ENST00000477052 SARSP49591 514 aaKnown RBP13.21□□□□□ -0.29
VARS2-208ENST00000477052 ZP2Q05996 745 aa13.21□□□□□ -0.29
VARS2-208ENST00000477052 STK3Q13188 491 aa13.21□□□□□ -0.29
VARS2-208ENST00000477052 TOB2Q14106 344 aaPredicted RBP13.21□□□□□ -0.29
VARS2-208ENST00000477052 SPOUT1Q5T280 376 aaKnown RBP13.21□□□□□ -0.29
VARS2-208ENST00000477052 ZNF746Q6NUN9 644 aaPredicted RBP13.21□□□□□ -0.29
VARS2-208ENST00000477052 AIFM3Q96NN9 605 aa13.21□□□□□ -0.29
VARS2-208ENST00000477052 SH2D3AQ9BRG2 576 aa13.21□□□□□ -0.29
VARS2-208ENST00000477052 PLVAPQ9BX97 442 aa13.21□□□□□ -0.29
VARS2-208ENST00000477052 LMAN2LQ9H0V9 348 aa13.21□□□□□ -0.29
VARS2-208ENST00000477052 TBC1D22BQ9NU19 505 aa13.21□□□□□ -0.29
VARS2-208ENST00000477052 TCEAL9Q9UHQ7 104 aa13.21□□□□□ -0.29
VARS2-208ENST00000477052 PCDHA10Q9Y5I2 948 aa13.21□□□□□ -0.29
VARS2-208ENST00000477052 PLXNA4Q9HCM2 1894 aa13.21□□□□□ -0.3
VARS2-208ENST00000477052 COL1A2P08123 1366 aa13.2□□□□□ -0.3
VARS2-208ENST00000477052 NID2Q14112 1375 aa13.2□□□□□ -0.3
VARS2-208ENST00000477052 C9IYK1 514 aa13.2□□□□□ -0.3
VARS2-208ENST00000477052 PER2O15055 1255 aa13.2□□□□□ -0.3
VARS2-208ENST00000477052 MBTPS2O43462 519 aa13.2□□□□□ -0.3
VARS2-208ENST00000477052 GPR37L1O60883 481 aa13.2□□□□□ -0.3
VARS2-208ENST00000477052 CSDE1O75534 798 aaKnown RBP13.2□□□□□ -0.3
VARS2-208ENST00000477052 RPLP2P05387 115 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms