RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 CLCN2P51788 898 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 EVA1CP58658 441 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 TUBA4AP68366 448 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 PCDH1Q08174 1060 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 PPIDQ08752 370 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 DMPKQ09013 629 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 LRRC14Q15048 493 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 WHAMMP3Q1A5X7 153 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 ZNF423Q2M1K9 1284 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 ALDH1L2Q3SY69 923 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 ADALQ6DHV7 355 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 BZW1Q7L1Q6 419 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 HDXQ7Z353 690 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 KRT77Q7Z794 578 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 SESTD1Q86VW0 696 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 JAMLQ86YT9 394 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 NDUFAF2Q8N183 169 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 THEMISQ8N1K5 641 aaPredicted RBP6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 C19orf47Q8N9M1 422 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 ST13P5Q8NFI4 369 aaPredicted RBP6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 BSNDQ8WZ55 320 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 ATP6V0A1Q93050 837 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 HVCN1Q96D96 273 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 ACSBG1Q96GR2 724 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 MAP3K14Q99558 947 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 USP26Q9BXU7 913 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 FAM126AQ9BYI3 521 aaPredicted RBP6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 UPF3BQ9BZI7 483 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 NACAP1Q9BZK3 213 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 YIPF3Q9GZM5 350 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 ACTR5Q9H9F9 607 aaPredicted RBP6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 AS3MTQ9HBK9 375 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 ZCCHC17Q9NP64 241 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 CEP131Q9UPN4 1083 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 MROH2AA6NES4 1674 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 C3P01024 1663 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 CDC42BPBQ9Y5S2 1711 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 TTC41PQ6P2S7 1318 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 MYBBP1AQ9BQG0 1328 aaKnown RBP6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 LRRIQ3A6PVS8 624 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 CHL1O00533 1208 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 LSM1O15116 133 aaKnown RBP6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 SGTAO43765 313 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 DIAPH2O60879 1101 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 SHOX2O60902 331 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 HIP1RO75146 1068 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 ATE1O95260 518 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 ARAFP10398 606 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 HSPA8P11142 646 aaKnown RBP6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 ATP5JP18859 108 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 ARNTP27540 789 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 GPLD1P80108 840 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 RPL6Q02878 288 aaKnown RBP6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 DDB1Q16531 1140 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 PABPC1LQ4VXU2 614 aaKnown RBP6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 CCSAPQ6IQ19 270 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 MPRIPQ6WCQ1 1025 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 KRT26Q7Z3Y9 468 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 C11orf74Q86VG3 221 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 ANKLE2Q86XL3 938 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 CCAR1Q8IX12 1150 aaKnown RBP6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 SMC1BQ8NDV3 1235 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 CNNM3Q8NE01 707 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 PPP1R14CQ8TAE6 165 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 SUN5Q8TC36 379 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 FRS2Q8WU20 508 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 DYDC1Q8WWB3 177 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 USP6NLQ92738 828 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 OPTNQ96CV9 577 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 NEUROD6Q96NK8 337 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 CTAGE1Q96RT6 745 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 SMC6Q96SB8 1091 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 CGREF1Q99674 301 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 MOV10L1Q9BXT6 1211 aaKnown RBP6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 HOMER2Q9NSB8 354 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 PCMTD2Q9NV79 361 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 DCAF16Q9NXF7 216 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 IL20Q9NYY1 176 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 GABBR1Q9UBS5 961 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 GGA2Q9UJY4 613 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 ABCA6Q8N139 1617 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 PLA2R1Q13018 1463 aa6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 BLMP54132 1417 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-215ENST00000475319 CAMSAP1Q5T5Y3 1602 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 PHLPP2Q6ZVD8 1323 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 FRMD3A2A2Y4 597 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 DYTNA2CJ06 578 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 RASSF10A6NK89 507 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 UPK3BL1B0FP48 263 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 UPK3BL2E5RIL1 263 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 NDUFAB1O14561 156 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 WDR46O15213 610 aaKnown RBP6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 SLC26A4O43511 780 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 MGRN1O60291 552 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 SMIM24O75264 130 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 NPTXRO95502 500 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 VIMP08670 466 aaKnown RBP6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 SYT1P21579 422 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 PTGS1P23219 599 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 ALDH3A1P30838 453 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms