RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 HAUS1Q96CS2 278 aa14.93□□□□□ -0.02
BRAT1-203ENST00000467558 MYOZ2Q9NPC6 264 aa14.93□□□□□ -0.02
BRAT1-203ENST00000467558 NUB1Q9Y5A7 615 aa14.93□□□□□ -0.02
BRAT1-203ENST00000467558 PDXKO00764 312 aa14.93□□□□□ -0.02
BRAT1-203ENST00000467558 TBC1D8O95759 1140 aa14.93□□□□□ -0.02
BRAT1-203ENST00000467558 VPS41P49754 854 aa14.93□□□□□ -0.02
BRAT1-203ENST00000467558 R3HDM1Q15032 1099 aaKnown RBP14.93□□□□□ -0.02
BRAT1-203ENST00000467558 CEP85LQ5SZL2 805 aa14.93□□□□□ -0.02
BRAT1-203ENST00000467558 ZNF302Q9NR11 478 aa14.93□□□□□ -0.02
BRAT1-203ENST00000467558 ZNF148Q9UQR1 794 aa14.93□□□□□ -0.02
BRAT1-203ENST00000467558 FMR1Q06787 632 aaKnown RBP eCLIP14.93□□□□□ -0.02
BRAT1-203ENST00000467558 RHOT2Q8IXI1 618 aa14.93□□□□□ -0.02
BRAT1-203ENST00000467558 CCDC97Q96F63 343 aaPredicted RBP14.93□□□□□ -0.02
BRAT1-203ENST00000467558 TRIM7Q9C029 511 aa14.93□□□□□ -0.02
BRAT1-203ENST00000467558 TMEM39BQ9GZU3 492 aa14.93□□□□□ -0.02
BRAT1-203ENST00000467558 A0A1B0GTH6 734 aa14.92□□□□□ -0.02
BRAT1-203ENST00000467558 RGS16O15492 202 aaPredicted RBP14.92□□□□□ -0.02
BRAT1-203ENST00000467558 MED7O43513 233 aa14.92□□□□□ -0.02
BRAT1-203ENST00000467558 KRT15P19012 456 aa14.92□□□□□ -0.02
BRAT1-203ENST00000467558 CXCR5P32302 372 aa14.92□□□□□ -0.02
BRAT1-203ENST00000467558 LMNB2Q03252 620 aa14.92□□□□□ -0.02
BRAT1-203ENST00000467558 BFSP1Q12934 665 aa14.92□□□□□ -0.02
BRAT1-203ENST00000467558 PSPC1Q8WXF1 523 aaKnown RBP14.92□□□□□ -0.02
BRAT1-203ENST00000467558 NACA2Q9H009 215 aa14.92□□□□□ -0.02
BRAT1-203ENST00000467558 RPF1Q9H9Y2 349 aaKnown RBP14.92□□□□□ -0.02
BRAT1-203ENST00000467558 ADGRG1Q9Y653 693 aa14.92□□□□□ -0.02
BRAT1-203ENST00000467558 OSTNP61366 133 aa14.92□□□□□ -0.02
BRAT1-203ENST00000467558 APBA1Q02410 837 aa14.92□□□□□ -0.02
BRAT1-203ENST00000467558 SMAP1Q8IYB5 467 aaPredicted RBP14.92□□□□□ -0.02
BRAT1-203ENST00000467558 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.92□□□□□ -0.02
BRAT1-203ENST00000467558 FAM205AQ6ZU69 1335 aa14.92□□□□□ -0.02
BRAT1-203ENST00000467558 GCLMP48507 274 aa14.92□□□□□ -0.02
BRAT1-203ENST00000467558 FXR2P51116 673 aaKnown RBP eCLIP14.92□□□□□ -0.026e-8■■■■■ 29.6
BRAT1-203ENST00000467558 ARHGEF6Q15052 776 aa14.92□□□□□ -0.02
BRAT1-203ENST00000467558 FASTKD5Q7L8L6 764 aaKnown RBP14.92□□□□□ -0.02
BRAT1-203ENST00000467558 P3H4Q92791 437 aa14.92□□□□□ -0.02
BRAT1-203ENST00000467558 EHD4Q9H223 541 aa14.92□□□□□ -0.02
BRAT1-203ENST00000467558 PODXL2Q9NZ53 605 aa14.92□□□□□ -0.02
BRAT1-203ENST00000467558 IQCA1LA6NCM1 817 aa14.91□□□□□ -0.02
BRAT1-203ENST00000467558 HEXIM1O94992 359 aaKnown RBP14.91□□□□□ -0.02
BRAT1-203ENST00000467558 MXRA7P84157 204 aa14.91□□□□□ -0.02
BRAT1-203ENST00000467558 ITIH3Q06033 890 aa14.91□□□□□ -0.02
BRAT1-203ENST00000467558 KCTD17Q8N5Z5 321 aa14.91□□□□□ -0.02
BRAT1-203ENST00000467558 PROCA1Q8NCQ7 364 aaPredicted RBP14.91□□□□□ -0.02
BRAT1-203ENST00000467558 DPF2Q92785 391 aa14.91□□□□□ -0.02
BRAT1-203ENST00000467558 PRMT6Q96LA8 375 aaPredicted RBP14.91□□□□□ -0.02
BRAT1-203ENST00000467558 VPS37BQ9H9H4 285 aa14.91□□□□□ -0.02
BRAT1-203ENST00000467558 DAAM1Q9Y4D1 1078 aa14.91□□□□□ -0.02
BRAT1-203ENST00000467558 POLRMTO00411 1230 aaKnown RBP14.91□□□□□ -0.02
BRAT1-203ENST00000467558 GMPSP49915 693 aaPredicted RBP14.91□□□□□ -0.02
BRAT1-203ENST00000467558 STK4Q13043 487 aa14.91□□□□□ -0.02
BRAT1-203ENST00000467558 TTLL4Q14679 1199 aa14.91□□□□□ -0.02
BRAT1-203ENST00000467558 FRMD5Q7Z6J6 570 aa14.91□□□□□ -0.02
BRAT1-203ENST00000467558 TRIM50Q86XT4 487 aa14.91□□□□□ -0.02
BRAT1-203ENST00000467558 PSMD1Q99460 953 aa14.91□□□□□ -0.02
BRAT1-203ENST00000467558 DEFB129Q9H1M3 183 aa14.91□□□□□ -0.02
BRAT1-203ENST00000467558 UBE2Q2LH0YL09 131 aa14.91□□□□□ -0.02
BRAT1-203ENST00000467558 GRIN1Q05586 938 aa14.91□□□□□ -0.02
BRAT1-203ENST00000467558 MYO1EQ12965 1108 aa14.91□□□□□ -0.02
BRAT1-203ENST00000467558 BAATQ14032 418 aaPredicted RBP14.91□□□□□ -0.02
BRAT1-203ENST00000467558 ANGEL2Q5VTE6 544 aaKnown RBP14.91□□□□□ -0.02
BRAT1-203ENST00000467558 MTRQ99707 1265 aa14.91□□□□□ -0.02
BRAT1-203ENST00000467558 IFT122Q9HBG6 1241 aa14.91□□□□□ -0.02
BRAT1-203ENST00000467558 FAM114A2Q9NRY5 505 aa14.91□□□□□ -0.02
BRAT1-203ENST00000467558 GINM1Q9NU53 330 aa14.91□□□□□ -0.02
BRAT1-203ENST00000467558 ODF2LQ9ULJ1 636 aa14.91□□□□□ -0.02
BRAT1-203ENST00000467558 ANO9A1A5B4 782 aa14.91□□□□□ -0.02
BRAT1-203ENST00000467558 HOXA10P31260 410 aaPredicted RBP14.91□□□□□ -0.02
BRAT1-203ENST00000467558 SARNPP82979 210 aaKnown RBP14.91□□□□□ -0.02
BRAT1-203ENST00000467558 DNAJC24Q6P3W2 148 aa14.91□□□□□ -0.02
BRAT1-203ENST00000467558 HAUS6Q7Z4H7 955 aa14.91□□□□□ -0.02
BRAT1-203ENST00000467558 THNSL1Q8IYQ7 743 aa14.91□□□□□ -0.02
BRAT1-203ENST00000467558 SMC6Q96SB8 1091 aa14.91□□□□□ -0.02
BRAT1-203ENST00000467558 MON2Q7Z3U7 1717 aa14.9□□□□□ -0.02
BRAT1-203ENST00000467558 MYMKA6NI61 221 aa14.9□□□□□ -0.02
BRAT1-203ENST00000467558 GOLGA8KD6RF30 607 aa14.9□□□□□ -0.02
BRAT1-203ENST00000467558 CTNND1O60716 968 aaKnown RBP14.9□□□□□ -0.02
BRAT1-203ENST00000467558 ATF2P15336 505 aa14.9□□□□□ -0.02
BRAT1-203ENST00000467558 VAMP7P51809 220 aa14.9□□□□□ -0.02
BRAT1-203ENST00000467558 EPHB4P54760 987 aa14.9□□□□□ -0.02
BRAT1-203ENST00000467558 CASC4Q6P4E1 433 aa14.9□□□□□ -0.02
BRAT1-203ENST00000467558 PDZD4Q76G19 769 aaPredicted RBP14.9□□□□□ -0.02
BRAT1-203ENST00000467558 NSMCE1Q8WV22 266 aa14.9□□□□□ -0.02
BRAT1-203ENST00000467558 TIPINQ9BVW5 301 aa14.9□□□□□ -0.02
BRAT1-203ENST00000467558 SLC9A2Q9UBY0 812 aa14.9□□□□□ -0.02
BRAT1-203ENST00000467558 CAPN11Q9UMQ6 739 aa14.9□□□□□ -0.02
BRAT1-203ENST00000467558 FAM193BQ96PV7 902 aaPredicted RBP14.9□□□□□ -0.02
BRAT1-203ENST00000467558 EPB41L5Q9HCM4 733 aa14.9□□□□□ -0.02
BRAT1-203ENST00000467558 CD2APQ9Y5K6 639 aa14.9□□□□□ -0.02
BRAT1-203ENST00000467558 KNDC1Q76NI1 1749 aa14.9□□□□□ -0.02
BRAT1-203ENST00000467558 HIP1RO75146 1068 aa14.9□□□□□ -0.02
BRAT1-203ENST00000467558 CD58P19256 250 aa14.9□□□□□ -0.02
BRAT1-203ENST00000467558 ARL1P40616 181 aaPredicted RBP14.9□□□□□ -0.02
BRAT1-203ENST00000467558 TKFCQ3LXA3 575 aa14.9□□□□□ -0.02
BRAT1-203ENST00000467558 HINFPQ9BQA5 517 aa14.9□□□□□ -0.02
BRAT1-203ENST00000467558 JPH1Q9HDC5 661 aaPredicted RBP14.9□□□□□ -0.02
BRAT1-203ENST00000467558 KCND2Q9NZV8 630 aa14.9□□□□□ -0.02
BRAT1-203ENST00000467558 RPA1P27694 616 aa14.89□□□□□ -0.03
BRAT1-203ENST00000467558 KCNJ6P48051 423 aa14.89□□□□□ -0.03
BRAT1-203ENST00000467558 KAZNQ674X7 775 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms