RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 SLC12A7Q9Y666 1083 aa12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 EPN1Q9Y6I3 576 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 KRT86O43790 486 aa12.56□□□□□ -0.4
TRAPPC3-205ENST00000462715 PLA2G6O60733 806 aa12.56□□□□□ -0.4
TRAPPC3-205ENST00000462715 CAND2O75155 1236 aa12.56□□□□□ -0.4
TRAPPC3-205ENST00000462715 PARP1P09874 1014 aaKnown RBP12.56□□□□□ -0.4
TRAPPC3-205ENST00000462715 ZNF543Q08ER8 600 aa12.56□□□□□ -0.4
TRAPPC3-205ENST00000462715 PTPAQ15257 358 aa12.56□□□□□ -0.4
TRAPPC3-205ENST00000462715 MTHFD1LQ6UB35 978 aa12.56□□□□□ -0.4
TRAPPC3-205ENST00000462715 KCTD1Q719H9 257 aa12.56□□□□□ -0.4
TRAPPC3-205ENST00000462715 ZNF654Q8IZM8 581 aa12.56□□□□□ -0.4
TRAPPC3-205ENST00000462715 CCDC155Q8N6L0 562 aa12.56□□□□□ -0.4
TRAPPC3-205ENST00000462715 ACRBPQ8NEB7 543 aa12.56□□□□□ -0.4
TRAPPC3-205ENST00000462715 GPHNQ9NQX3 736 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC3-205ENST00000462715 HAUS2Q9NVX0 235 aa12.56□□□□□ -0.4
TRAPPC3-205ENST00000462715 KCNH3Q9ULD8 1083 aa12.56□□□□□ -0.4
TRAPPC3-205ENST00000462715 GYPCP04921 128 aa12.56□□□□□ -0.4
TRAPPC3-205ENST00000462715 HSPA1AP0DMV8 641 aaKnown RBP12.56□□□□□ -0.4
TRAPPC3-205ENST00000462715 HSPA1BP0DMV9 641 aaKnown RBP12.56□□□□□ -0.4
TRAPPC3-205ENST00000462715 CASP14P31944 242 aa12.56□□□□□ -0.4
TRAPPC3-205ENST00000462715 DSG3P32926 999 aa12.56□□□□□ -0.4
TRAPPC3-205ENST00000462715 PAPOLAP51003 745 aaKnown RBP12.56□□□□□ -0.4
TRAPPC3-205ENST00000462715 ERVK-24P63145 666 aa12.56□□□□□ -0.4
TRAPPC3-205ENST00000462715 POSTNQ15063 836 aa12.56□□□□□ -0.4
TRAPPC3-205ENST00000462715 E2F5Q15329 346 aa12.56□□□□□ -0.4
TRAPPC3-205ENST00000462715 CFAP58Q5T655 872 aa12.56□□□□□ -0.4
TRAPPC3-205ENST00000462715 LBX2Q6XYB7 198 aa12.56□□□□□ -0.4
TRAPPC3-205ENST00000462715 CACNA2D3Q8IZS8 1091 aa12.56□□□□□ -0.4
TRAPPC3-205ENST00000462715 MB21D1Q8N884 522 aa12.56□□□□□ -0.4
TRAPPC3-205ENST00000462715 CAGE1Q8TC20 777 aa12.56□□□□□ -0.4
TRAPPC3-205ENST00000462715 MAP3K14Q99558 947 aa12.56□□□□□ -0.4
TRAPPC3-205ENST00000462715 SUDS3Q9H7L9 328 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC3-205ENST00000462715 PPP1R9AQ9ULJ8 1098 aa12.56□□□□□ -0.4
TRAPPC3-205ENST00000462715 SPDYE16A6NNV3 312 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC3-205ENST00000462715 DNM1LO00429 736 aa12.55□□□□□ -0.4
TRAPPC3-205ENST00000462715 NDUFA10O95299 355 aa12.55□□□□□ -0.4
TRAPPC3-205ENST00000462715 KIF5BP33176 963 aa12.55□□□□□ -0.4
TRAPPC3-205ENST00000462715 VAV2P52735 878 aa12.55□□□□□ -0.4
TRAPPC3-205ENST00000462715 TROAPQ12815 778 aa12.55□□□□□ -0.4
TRAPPC3-205ENST00000462715 ZBTB10Q96DT7 871 aa12.55□□□□□ -0.4
TRAPPC3-205ENST00000462715 ZIM3Q96PE6 472 aa12.55□□□□□ -0.4
TRAPPC3-205ENST00000462715 TSGA10Q9BZW7 698 aa12.55□□□□□ -0.4
TRAPPC3-205ENST00000462715 FBXO28Q9NVF7 368 aa12.55□□□□□ -0.4
TRAPPC3-205ENST00000462715 RNF14Q9UBS8 474 aa12.55□□□□□ -0.4
TRAPPC3-205ENST00000462715 CTDP1Q9Y5B0 961 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC3-205ENST00000462715 PCDHGC5Q9Y5F6 944 aa12.55□□□□□ -0.4
TRAPPC3-205ENST00000462715 FRMPD2Q68DX3 1309 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC3-205ENST00000462715 ADGRA2Q96PE1 1338 aa12.55□□□□□ -0.4
TRAPPC3-205ENST00000462715 GOLGA6L10A0A0M3HER8 536 aa12.54□□□□□ -0.4
TRAPPC3-205ENST00000462715 CDKL5O76039 1030 aa12.54□□□□□ -0.4
TRAPPC3-205ENST00000462715 FDX1P10109 184 aa12.54□□□□□ -0.4
TRAPPC3-205ENST00000462715 CCND1P24385 295 aa12.54□□□□□ -0.4
TRAPPC3-205ENST00000462715 ITGB3BPQ13352 177 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC3-205ENST00000462715 ZNF579Q8NAF0 562 aaKnown RBP12.54□□□□□ -0.4
TRAPPC3-205ENST00000462715 NUP133Q8WUM0 1156 aa12.54□□□□□ -0.4
TRAPPC3-205ENST00000462715 CCT6BQ92526 530 aa12.54□□□□□ -0.4
TRAPPC3-205ENST00000462715 BICD1Q96G01 975 aa12.54□□□□□ -0.4
TRAPPC3-205ENST00000462715 GPCPD1Q9NPB8 672 aa12.54□□□□□ -0.4
TRAPPC3-205ENST00000462715 STIM2Q9P246 746 aa12.54□□□□□ -0.4
TRAPPC3-205ENST00000462715 LIMA1Q9UHB6 759 aaKnown RBP12.54□□□□□ -0.4
TRAPPC3-205ENST00000462715 RABGAP1Q9Y3P9 1069 aa12.54□□□□□ -0.4
TRAPPC3-205ENST00000462715 KLF18A0A0U1RQI7 1052 aa12.54□□□□□ -0.4
TRAPPC3-205ENST00000462715 TRAPPC3O43617 180 aa12.54□□□□□ -0.4
TRAPPC3-205ENST00000462715 ATP1A1P05023 1023 aaKnown RBP12.54□□□□□ -0.4
TRAPPC3-205ENST00000462715 CDC27P30260 824 aa12.54□□□□□ -0.4
TRAPPC3-205ENST00000462715 CTCFP49711 727 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC3-205ENST00000462715 RCAN1P53805 252 aa12.54□□□□□ -0.4
TRAPPC3-205ENST00000462715 ZNF268Q14587 947 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC3-205ENST00000462715 GRM4Q14833 912 aa12.54□□□□□ -0.4
TRAPPC3-205ENST00000462715 FAM110CQ1W6H9 321 aa12.54□□□□□ -0.4
TRAPPC3-205ENST00000462715 APOA5Q6Q788 366 aa12.54□□□□□ -0.4
TRAPPC3-205ENST00000462715 C17orf99Q6UX52 265 aa12.54□□□□□ -0.4
TRAPPC3-205ENST00000462715 CACNA2D4Q7Z3S7 1137 aa12.54□□□□□ -0.4
TRAPPC3-205ENST00000462715 ATRIPQ8WXE1 791 aa12.54□□□□□ -0.4
TRAPPC3-205ENST00000462715 PURBQ96QR8 312 aaKnown RBP12.54□□□□□ -0.4
TRAPPC3-205ENST00000462715 NUP58Q9BVL2 599 aa12.54□□□□□ -0.4
TRAPPC3-205ENST00000462715 CPA4Q9UI42 421 aa12.54□□□□□ -0.4
TRAPPC3-205ENST00000462715 A0A0U1RQJ8 604 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 E7EVH7 732 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 ZBTB43O43298 467 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 ZBED4O75132 1171 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 ECM2O94769 699 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 ANP32DO95626 131 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 RPSAP08865 295 aaKnown RBP12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 BIRC3Q13489 604 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 SETDB1Q15047 1291 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 LONRF3Q496Y0 759 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 BTNL9Q6UXG8 535 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 IFT20Q8IY31 132 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 GALNT15Q8N3T1 639 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 WHAMMQ8TF30 809 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 ATG4CQ96DT6 458 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 THOC1Q96FV9 657 aaKnown RBP12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 SEC16BQ96JE7 1060 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 GOLGA6L10A6NI86 522 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 GPR25O00155 361 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 STXBP3O00186 592 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 TEX33O43247 280 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 NPTXRO95502 500 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 VIMP08670 466 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms