RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 TRIM26Q12899 539 aaPredicted RBP6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 ZNF211Q13398 564 aaPredicted RBP6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 TATDN1Q6P1N9 297 aa6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 TLK2Q86UE8 772 aa6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 ZDHHC14Q8IZN3 488 aa6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 REPS2Q8NFH8 660 aa6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 ZCCHC14Q8WYQ9 949 aaKnown RBP6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 DHX38Q92620 1227 aaKnown RBP6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 ATG4CQ96DT6 458 aa6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 ZNF837Q96EG3 531 aaPredicted RBP6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 KAZALD1Q96I82 304 aa6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 CEP63Q96MT8 703 aa6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 C11orf84Q9BUA3 381 aaPredicted RBP6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 LSM14BQ9BX40 385 aaKnown RBP6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 ATXN7L1Q9ULK2 861 aaPredicted RBP6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 SMG5Q9UPR3 1016 aaKnown RBP6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 FNDC3AQ9Y2H6 1198 aaKnown RBP6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 Q9Y3F1 56 aa6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 RAI2Q9Y5P3 530 aa6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 LRRK2Q5S007 2527 aa6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 PTPRQQ9UMZ3 2332 aa6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 MROH7-TTC4A0A0A0MT08 1334 aa6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 BOD1L1Q8NFC6 3051 aa6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 PARNO95453 639 aaKnown RBP6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 TOP3BO95985 862 aaKnown RBP6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 NEFMP07197 916 aa6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 HSPA5P11021 654 aaKnown RBP6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 SELPP16109 830 aa6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 NCLP19338 710 aaKnown RBP6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 SPINK2P20155 84 aa6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 MPSTP25325 297 aa6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 MZF1P28698 734 aaPredicted RBP6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 ZEB1P37275 1124 aaPredicted RBP6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 TMPOP42166 694 aaKnown RBP6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 MCAMP43121 646 aa6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 EIF1AXP47813 144 aaKnown RBP6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 IDH3AP50213 366 aa6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 SPEM2Q0P670 501 aa6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 AAMPQ13685 434 aa6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 TAF7LQ5H9L4 462 aa6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 NFRKBQ6P4R8 1299 aa6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 C19orf48Q6RUI8 117 aa6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 G2E3Q7L622 706 aa6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 ETFBKMTQ8IXQ9 262 aa6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 VWA5B2Q8N398 1253 aa6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 TTC16Q8NEE8 873 aa6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 LINS1Q8NG48 757 aa6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 SPPL3Q8TCT6 385 aa6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 PPP1R13LQ8WUF5 828 aa6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 HSH2DQ96JZ2 352 aa6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 FEZ1Q99689 392 aa6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 DHX36Q9H2U1 1008 aaKnown RBP6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 CDH22Q9UJ99 828 aa6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 ZNF214Q9UL59 606 aaPredicted RBP6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 NR2E1Q9Y466 385 aa6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 PCDHGA2Q9Y5H1 932 aa6.49□□□□□ -1.37
SBDSP1-204ENST00000453858 CDC14CA4D256 554 aa6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 OPLAHO14841 1288 aa6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 EFSO43281 561 aa6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 NDUFB5O43674 189 aa6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 ZEB2O60315 1214 aa6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 TBC1D4O60343 1298 aa6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 LRP3O75074 770 aa6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 KCNK5O95279 499 aa6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 PRB1P04280 392 aa6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 DCNP07585 359 aaKnown RBP6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 ZNF853P0CG23 659 aa6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 CTNNB1P35222 781 aa6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 STAT3P40763 770 aa6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 ZAP70P43403 619 aa6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 LIMK1P53667 647 aa6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 TNP2Q05952 138 aa6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 TYRO3Q06418 890 aa6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 EHHADHQ08426 723 aa6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 UBAP2LQ14157 1087 aaKnown RBP6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 TAPT1Q6NXT6 567 aa6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 LRRC8DQ7L1W4 858 aa6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 ARMCX2Q7L311 632 aa6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 CCDC144CPQ8IYA2 1237 aa6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 C8orf58Q8NAV2 365 aa6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 CAGE1Q8TC20 777 aa6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 SECISBP2LQ93073 1101 aaKnown RBP6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 GTPBP3Q969Y2 492 aaKnown RBP6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 YME1L1Q96TA2 773 aa6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 RC3H2Q9HBD1 1191 aaKnown RBP6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 BRD7Q9NPI1 651 aa6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 ANO2Q9NQ90 1003 aa6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 NDFIP2Q9NV92 336 aa6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 CUEDC1Q9NWM3 386 aaPredicted RBP6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 BRPF3Q9ULD4 1205 aa6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 LAS1LQ9Y4W2 734 aaKnown RBP6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 RIPK3Q9Y572 518 aa6.48□□□□□ -1.37
SBDSP1-204ENST00000453858 CSMD1Q96PZ7 3565 aa6.47□□□□□ -1.37
SBDSP1-204ENST00000453858 MYH13Q9UKX3 1938 aa6.47□□□□□ -1.37
SBDSP1-204ENST00000453858 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.47□□□□□ -1.37
SBDSP1-204ENST00000453858 ELL2O00472 640 aaPredicted RBP6.47□□□□□ -1.37
SBDSP1-204ENST00000453858 AMHP03971 560 aa6.47□□□□□ -1.37
SBDSP1-204ENST00000453858 MAPTP10636 758 aaKnown RBP6.47□□□□□ -1.37
SBDSP1-204ENST00000453858 CKBP12277 381 aa6.47□□□□□ -1.37
SBDSP1-204ENST00000453858 MECOMQ03112 1051 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms