RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 DNAJC8O75937 253 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 KRT38O76015 456 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 NPTXRO95502 500 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 TUBBP07437 444 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 C6orf222P0C671 652 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 LINGO3P0C6S8 592 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 PABPC1P11940 636 aaKnown RBP4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 POU3F2P20265 443 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 SLC8A1P32418 973 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 GBP1P32455 592 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 COPB2P35606 906 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 CAP2P40123 477 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 GRIA2P42262 883 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 PSMC4P43686 418 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 GNAQP50148 359 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 CCT8P50990 548 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 CCNG1P51959 295 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 HDAC4P56524 1084 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 UBE2HP62256 183 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 RAC1P63000 192 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 CTAG1AP78358 180 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 NUCB1Q02818 461 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 RIPK1Q13546 671 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 BLMHQ13867 455 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 MAP7Q14244 749 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 SLBPQ14493 270 aaKnown RBP eCLIP4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 KRT72Q14CN4 511 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 BCL2A1Q16548 175 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 NKG7Q16617 165 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 NFE2Q16621 373 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 TPD52L1Q16890 204 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 CCDC57Q2TAC2 916 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 TUBB8Q3ZCM7 444 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 ANKRD39Q53RE8 183 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 EXOSC6Q5RKV6 272 aaKnown RBP4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 PACS1Q6VY07 963 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 NSMFQ6X4W1 530 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 SYNE3Q6ZMZ3 975 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 MICALCLQ6ZW33 695 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 BZW1Q7L1Q6 419 aaKnown RBP4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 CDC37L1Q7L3B6 337 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 RSPH3Q86UC2 560 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 ZNF227Q86WZ6 799 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 LRRC49Q8IUZ0 686 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 MAP4K3Q8IVH8 894 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 DMRTC2Q8IXT2 367 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 LRRC43Q8N309 656 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 GBP7Q8N8V2 638 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 CCDC150Q8NCX0 1101 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 TRIM58Q8NG06 486 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 FAM76AQ8TAV0 307 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 RIN3Q8TB24 985 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 BAHD1Q8TBE0 780 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 LEO1Q8WVC0 666 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 PPP2R3CQ969Q6 453 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 LENG1Q96BZ8 264 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 EVI5LQ96CN4 794 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 SPDL1Q96EA4 605 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 CCDC34Q96HJ3 373 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 MAML3Q96JK9 1138 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 CLIC6Q96NY7 704 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 FANCD2OSQ96PS1 177 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 MPHOSPH6Q99547 160 aaKnown RBP4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 KRTAP4-12Q9BQ66 201 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 MOV10L1Q9BXT6 1211 aaKnown RBP4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 STK31Q9BXU1 1019 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 PARD6BQ9BYG5 372 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 UPF3BQ9BZI7 483 aaKnown RBP4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 NACA2Q9H009 215 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 ZWILCHQ9H900 591 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 TRIM39Q9HCM9 518 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 CD248Q9HCU0 757 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 DISC1Q9NRI5 854 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 RAD18Q9NS91 495 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 KLC4Q9NSK0 619 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 FAM86C1Q9NVL1 165 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 KCNK4Q9NYG8 393 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 LRP2BPQ9P2M1 347 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 TUBGCP4Q9UGJ1 667 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 CIDEBQ9UHD4 219 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 TCEAL9Q9UHQ7 104 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 TMCO1Q9UM00 188 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 TMED5Q9Y3A6 229 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 TTLL3Q9Y4R7 772 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 NPHP4O75161 1426 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 PDS5BQ9NTI5 1447 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 NESP48681 1621 aa4.03□□□□□ -1.77
HMGB3P8-201ENST00000449709 ENO4A6NNW6 628 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 B4DLN1 442 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 TMEM232C9JQI7 657 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 MEFVO15553 781 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 PRODHO43272 600 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 PRC1O43663 620 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 ZBED4O75132 1171 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 SEC31AO94979 1220 aaKnown RBP4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 ALDH2P05091 517 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 CPEP16870 476 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 CD68P34810 354 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 ARHGAP25P42331 645 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms