RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 CLASRPQ8N2M8 674 aaKnown RBP11.6□□□□□ -0.55
LINC00342-202ENST00000448494 ZNF280CQ8ND82 737 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 UBLCP1Q8WVY7 318 aaPredicted RBP11.6□□□□□ -0.55
LINC00342-202ENST00000448494 DGCR14Q96DF8 476 aaKnown RBP11.6□□□□□ -0.55
LINC00342-202ENST00000448494 PGM2Q96G03 612 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 VPS50Q96JG6 964 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 GBA3Q9H227 469 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 CCDC68Q9H2F9 335 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 HOXC10Q9NYD6 342 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 TLR7Q9NYK1 1049 aaKnown RBP11.6□□□□□ -0.55
LINC00342-202ENST00000448494 PNMA2Q9UL42 364 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 TTC26A0AVF1 554 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 UBAP1LF5GYI3 381 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 MAGEB3O15480 346 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 ZBED4O75132 1171 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 MTRF1O75570 445 aaKnown RBP11.6□□□□□ -0.55
LINC00342-202ENST00000448494 STK10O94804 968 aaKnown RBP11.6□□□□□ -0.55
LINC00342-202ENST00000448494 HMOX1P09601 288 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 UBTFL6P0CB48 400 aaPredicted RBP11.6□□□□□ -0.55
LINC00342-202ENST00000448494 ARFIP2P53365 341 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 CSE1LP55060 971 aaKnown RBP11.6□□□□□ -0.55
LINC00342-202ENST00000448494 TUBA4AP68366 448 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 MSLNQ13421 630 aaPredicted RBP11.6□□□□□ -0.55
LINC00342-202ENST00000448494 FXNQ16595 210 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 LRRC74BQ6ZQY2 392 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 TRIM67Q6ZTA4 783 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.6□□□□□ -0.55
LINC00342-202ENST00000448494 CCDC42Q96M95 316 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 PRMT1Q99873 361 aaKnown RBP11.6□□□□□ -0.55
LINC00342-202ENST00000448494 TANGO6Q9C0B7 1094 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 ADAM7Q9H2U9 754 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 PARVBQ9HBI1 364 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 FBXL5Q9UKA1 691 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 HBS1LQ9Y450 684 aaKnown RBP11.6□□□□□ -0.55
LINC00342-202ENST00000448494 KIDINS220Q9ULH0 1771 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 TULP4Q9NRJ4 1543 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 MYH7BA7E2Y1 1941 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 A0A1W2PQC6 194 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 BHMG1C9JSJ3 638 aaPredicted RBP11.59□□□□□ -0.55
LINC00342-202ENST00000448494 H0Y3Z8 333 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 SPTLC1O15269 473 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 OXSR1O95747 527 aaPredicted RBP11.59□□□□□ -0.55
LINC00342-202ENST00000448494 MSL3P1P0C860 447 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 PIM1P11309 404 aaPredicted RBP11.59□□□□□ -0.55
LINC00342-202ENST00000448494 TMED10P49755 219 aaKnown RBP11.59□□□□□ -0.55
LINC00342-202ENST00000448494 SLC34A1Q06495 639 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 ACVR2BQ13705 512 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 NCAPD2Q15021 1401 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 SPA17Q15506 151 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 WDR78Q5VTH9 848 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 KLHL35Q6PF15 583 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 MIGA2Q7L4E1 593 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 CROCCP2Q86T23 111 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 PATL1Q86TB9 770 aaKnown RBP11.59□□□□□ -0.55
LINC00342-202ENST00000448494 SELENOSQ9BQE4 189 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 HGH1Q9BTY7 390 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 SMARCAL1Q9NZC9 954 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 GGT7Q9UJ14 662 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 CD2APQ9Y5K6 639 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 GPC6Q9Y625 555 aaPredicted RBP11.59□□□□□ -0.55
LINC00342-202ENST00000448494 DUSP10Q9Y6W6 482 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 ZNF335Q9H4Z2 1342 aaPredicted RBP11.59□□□□□ -0.55
LINC00342-202ENST00000448494 FAM83GA6ND36 823 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 GOLGA8TH3BQL2 631 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 FBP2O00757 339 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 ZCCHC18P0CG32 403 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 GOLGA8HP0CJ92 632 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 PDIA3P30101 505 aaKnown RBP11.59□□□□□ -0.55
LINC00342-202ENST00000448494 RASSF2P50749 326 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 RASSF7Q02833 373 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 ZBTB17Q13105 803 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 PARP10Q53GL7 1025 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 ZNF804AQ7Z570 1209 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 PHLDB2Q86SQ0 1253 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 NELFCDQ8IXH7 590 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 KRT12Q99456 494 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 PHAXQ9H814 394 aaKnown RBP11.59□□□□□ -0.55
LINC00342-202ENST00000448494 NHEJ1Q9H9Q4 299 aaPredicted RBP11.59□□□□□ -0.55
LINC00342-202ENST00000448494 METTL14Q9HCE5 456 aaKnown RBP11.59□□□□□ -0.55
LINC00342-202ENST00000448494 TRPC7Q9HCX4 862 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 ZNF212Q9UDV6 495 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 SSX2IPQ9Y2D8 614 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 GIT1Q9Y2X7 761 aa11.59□□□□□ -0.55
LINC00342-202ENST00000448494 CEP170BQ9Y4F5 1589 aaPredicted RBP11.58□□□□□ -0.56
LINC00342-202ENST00000448494 KIF28PB7ZC32 967 aa11.58□□□□□ -0.56
LINC00342-202ENST00000448494 CYP2C9P11712 490 aa11.58□□□□□ -0.56
LINC00342-202ENST00000448494 GIT2Q14161 759 aa11.58□□□□□ -0.56
LINC00342-202ENST00000448494 WDR72Q3MJ13 1102 aa11.58□□□□□ -0.56
LINC00342-202ENST00000448494 FAM133AQ8N9E0 248 aa11.58□□□□□ -0.56
LINC00342-202ENST00000448494 TTC8Q8TAM2 541 aa11.58□□□□□ -0.56
LINC00342-202ENST00000448494 NRG4Q8WWG1 115 aa11.58□□□□□ -0.56
LINC00342-202ENST00000448494 MAP3K14Q99558 947 aa11.58□□□□□ -0.56
LINC00342-202ENST00000448494 USP44Q9H0E7 712 aa11.58□□□□□ -0.56
LINC00342-202ENST00000448494 EHD2Q9NZN4 543 aa11.58□□□□□ -0.56
LINC00342-202ENST00000448494 SEL1LQ9UBV2 794 aa11.58□□□□□ -0.56
LINC00342-202ENST00000448494 PCDHB2Q9Y5E7 798 aa11.58□□□□□ -0.56
LINC00342-202ENST00000448494 NUMBLQ9Y6R0 609 aa11.58□□□□□ -0.56
LINC00342-202ENST00000448494 BCL9LQ86UU0 1499 aa11.58□□□□□ -0.56
LINC00342-202ENST00000448494 MST1RQ04912 1400 aa11.58□□□□□ -0.56
LINC00342-202ENST00000448494 NUTM2BA6NNL0 878 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms