RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 RSPH14Q9UHP6 348 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 INTUQ9ULD6 942 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 KAT6BQ8WYB5 2073 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 RUSC2Q8N2Y8 1516 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 TOP2BQ02880 1626 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 FAM170AA1A519 330 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 RGS13O14921 159 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 ZSCAN9O15535 394 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 TSPY4P0CV99 314 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 TSPY10P0CW01 314 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 ZNF76P36508 570 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 CEBPAP49715 358 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 RPS6KA3P51812 740 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 COPAP53621 1224 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 CSE1LP55060 971 aaKnown RBP5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 UBASH3AP57075 661 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 BPIFB3P59826 476 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 ERVFRD-1P60508 538 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 CTAG1AP78358 180 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 SNW1Q13573 536 aaKnown RBP5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 BBS9Q3SYG4 887 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 ALFQ53S48 1182 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 SLC10A5Q5PT55 438 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 HHATQ5VTY9 493 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 CDCA2Q69YH5 1023 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 ZNF449Q6P9G9 518 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 C16orf54Q6UWD8 224 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 USP48Q86UV5 1035 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 CCDC65Q8IXS2 484 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 PHACTR4Q8IZ21 702 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 THEMISQ8N1K5 641 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 GIMAP8Q8ND71 665 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 FBXO27Q8NI29 283 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 FAM76AQ8TAV0 307 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 USP33Q8TEY7 942 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 CEP95Q96GE4 821 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 CRACR2AQ9BSW2 395 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 PRKRIP1Q9H875 184 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 ZNF304Q9HCX3 659 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 SH3GLB2Q9NR46 395 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 KLHL14Q9P2G3 628 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 EPS15L1Q9UBC2 864 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 PARP2Q9UGN5 583 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 DDX41Q9UJV9 622 aaKnown RBP5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 TCFL5Q9UL49 500 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 NOSIPQ9Y314 301 aaKnown RBP5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 PHLDB1Q86UU1 1377 aa5.37□□□□□ -1.55
HMGB3P9-201ENST00000441799 TBKBP1A7MCY6 615 aa5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 STXBP3O00186 592 aa5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 AKR1B10O60218 316 aa5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 ERLIN1O75477 346 aa5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 MYL1P05976 194 aa5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 CELA3BP08861 270 aa5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 TNNT1P13805 278 aa5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 ATF7P17544 494 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 GBP1P32455 592 aa5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 DAB2P98082 770 aa5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 SMC1AQ14683 1233 aaKnown RBP5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 ARHGEF6Q15052 776 aa5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 CLPPQ16740 277 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 GRAMD1BQ3KR37 738 aa5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 RABL6Q3YEC7 729 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 CNKSR3Q6P9H4 555 aa5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 CYP26C1Q6V0L0 522 aa5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 ZNF771Q7L3S4 317 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 BEND5Q7L4P6 421 aa5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 LDHDQ86WU2 507 aa5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 WDR75Q8IWA0 830 aaKnown RBP5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 RAVER1Q8IY67 606 aaKnown RBP5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 PEX5LQ8IYB4 626 aa5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 LILRB2Q8N423 598 aa5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 ZNF655Q8N720 491 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 PPHLN1Q8NEY8 458 aaKnown RBP5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 GSDMBQ8TAX9 411 aa5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 ANKRD49Q8WVL7 239 aa5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 ZNF75CPQ92670 426 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 USP6NLQ92738 828 aa5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 SH3KBP1Q96B97 665 aa5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 SH3GL1Q99961 368 aa5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 ADAM7Q9H2U9 754 aa5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 TMX1Q9H3N1 280 aa5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 PPCSQ9HAB8 311 aa5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 PSD3Q9NYI0 1048 aa5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 CHMP5Q9NZZ3 219 aa5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 SEPT10Q9P0V9 454 aa5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 KDRP35968 1356 aa5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 ADCY10Q96PN6 1610 aa5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 TSPOAP1O95153 1857 aa5.36□□□□□ -1.55
HMGB3P9-201ENST00000441799 ERICH3Q5RHP9 1530 aa5.35□□□□□ -1.55
HMGB3P9-201ENST00000441799 PTPRMP28827 1452 aa5.35□□□□□ -1.55
HMGB3P9-201ENST00000441799 SPAG9O60271 1321 aaKnown RBP5.35□□□□□ -1.55
HMGB3P9-201ENST00000441799 A0A0B4J203 849 aa5.35□□□□□ -1.55
HMGB3P9-201ENST00000441799 FADS2P1A8MWK0 482 aa5.35□□□□□ -1.55
HMGB3P9-201ENST00000441799 FKTNO75072 461 aa5.35□□□□□ -1.55
HMGB3P9-201ENST00000441799 SKAP2O75563 359 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P9-201ENST00000441799 SMC2O95347 1197 aa5.35□□□□□ -1.55
HMGB3P9-201ENST00000441799 SYPP08247 313 aa5.35□□□□□ -1.55
HMGB3P9-201ENST00000441799 GARTP22102 1010 aa5.35□□□□□ -1.55
HMGB3P9-201ENST00000441799 USP8P40818 1118 aa5.35□□□□□ -1.55
HMGB3P9-201ENST00000441799 PRPHP41219 470 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 320.9 ms