RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 PDHBP11177 359 aa18.15■□□□□ 0.5
PCDHA13-202ENST00000409494 KRT10P13645 584 aa18.15■□□□□ 0.5
PCDHA13-202ENST00000409494 PASKQ96RG2 1323 aa18.15■□□□□ 0.5
PCDHA13-202ENST00000409494 ASAP2O43150 1006 aa18.15■□□□□ 0.5
PCDHA13-202ENST00000409494 ELF1P32519 619 aa18.15■□□□□ 0.5
PCDHA13-202ENST00000409494 PRPSAP1Q14558 356 aa18.15■□□□□ 0.5
PCDHA13-202ENST00000409494 FYB2Q5VWT5 728 aa18.15■□□□□ 0.5
PCDHA13-202ENST00000409494 DNAJC24Q6P3W2 148 aa18.15■□□□□ 0.5
PCDHA13-202ENST00000409494 DSTYKQ6XUX3 929 aa18.15■□□□□ 0.5
PCDHA13-202ENST00000409494 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.15■□□□□ 0.5
PCDHA13-202ENST00000409494 POTEMA6NI47 508 aa18.15■□□□□ 0.5
PCDHA13-202ENST00000409494 MAPK4P31152 587 aa18.15■□□□□ 0.5
PCDHA13-202ENST00000409494 MXRA7P84157 204 aa18.15■□□□□ 0.5
PCDHA13-202ENST00000409494 CACNB1Q02641 598 aaPredicted RBP18.15■□□□□ 0.5
PCDHA13-202ENST00000409494 BZW1Q7L1Q6 419 aaKnown RBP18.15■□□□□ 0.5
PCDHA13-202ENST00000409494 CCDC110Q8TBZ0 833 aa18.15■□□□□ 0.5
PCDHA13-202ENST00000409494 FAM49AQ9H0Q0 323 aaPredicted RBP18.15■□□□□ 0.5
PCDHA13-202ENST00000409494 SMARCAD1Q9H4L7 1026 aa18.15■□□□□ 0.5
PCDHA13-202ENST00000409494 UBE2TQ9NPD8 197 aaPredicted RBP18.15■□□□□ 0.5
PCDHA13-202ENST00000409494 IPO11Q9UI26 975 aaKnown RBP18.15■□□□□ 0.5
PCDHA13-202ENST00000409494 ZBTB12Q9Y330 459 aaPredicted RBP18.15■□□□□ 0.5
PCDHA13-202ENST00000409494 JRKLQ9Y4A0 524 aa18.15■□□□□ 0.5
PCDHA13-202ENST00000409494 STXBP3O00186 592 aa18.15■□□□□ 0.5
PCDHA13-202ENST00000409494 MAP7D1Q3KQU3 841 aa18.15■□□□□ 0.5
PCDHA13-202ENST00000409494 SWSAP1Q6NVH7 229 aa18.15■□□□□ 0.5
PCDHA13-202ENST00000409494 FMR1NBQ8N0W7 255 aaPredicted RBP18.15■□□□□ 0.5
PCDHA13-202ENST00000409494 SEPT1Q8WYJ6 367 aa18.15■□□□□ 0.5
PCDHA13-202ENST00000409494 NR3C1P04150 777 aa18.14■□□□□ 0.49
PCDHA13-202ENST00000409494 APBA1Q02410 837 aa18.14■□□□□ 0.49
PCDHA13-202ENST00000409494 SFR1Q86XK3 245 aa18.14■□□□□ 0.49
PCDHA13-202ENST00000409494 SRGAP2BP0DMP2 458 aa18.14■□□□□ 0.49
PCDHA13-202ENST00000409494 ATP1A3P13637 1013 aa18.14■□□□□ 0.49
PCDHA13-202ENST00000409494 INPP5BP32019 993 aa18.14■□□□□ 0.49
PCDHA13-202ENST00000409494 CIITAP33076 1130 aa18.14■□□□□ 0.49
PCDHA13-202ENST00000409494 ARID5BQ14865 1188 aa18.14■□□□□ 0.49
PCDHA13-202ENST00000409494 POTEDQ86YR6 584 aa18.14■□□□□ 0.49
PCDHA13-202ENST00000409494 PBKQ96KB5 322 aa18.14■□□□□ 0.49
PCDHA13-202ENST00000409494 EIF2AK1Q9BQI3 630 aaKnown RBP18.14■□□□□ 0.49
PCDHA13-202ENST00000409494 LXNQ9BS40 222 aa18.14■□□□□ 0.49
PCDHA13-202ENST00000409494 MED4Q9NPJ6 270 aa18.14■□□□□ 0.49
PCDHA13-202ENST00000409494 GABPAQ06546 454 aa18.14■□□□□ 0.49
PCDHA13-202ENST00000409494 DENND2CQ68D51 928 aa18.14■□□□□ 0.49
PCDHA13-202ENST00000409494 SLC35F6Q8N357 371 aa18.14■□□□□ 0.49
PCDHA13-202ENST00000409494 STAG2Q8N3U4 1231 aa18.14■□□□□ 0.49
PCDHA13-202ENST00000409494 FAM149B1Q96BN6 582 aa18.14■□□□□ 0.49
PCDHA13-202ENST00000409494 ARL4AP40617 200 aa18.14■□□□□ 0.49
PCDHA13-202ENST00000409494 STAT5BP51692 787 aa18.14■□□□□ 0.49
PCDHA13-202ENST00000409494 SNRPFP62306 86 aaKnown RBP18.14■□□□□ 0.49
PCDHA13-202ENST00000409494 NFX1Q12986 1120 aaKnown RBP18.14■□□□□ 0.49
PCDHA13-202ENST00000409494 UAP1Q16222 522 aaPredicted RBP18.14■□□□□ 0.49
PCDHA13-202ENST00000409494 URGCPQ8TCY9 931 aa18.14■□□□□ 0.49
PCDHA13-202ENST00000409494 PIGOQ8TEQ8 1089 aa18.14■□□□□ 0.49
PCDHA13-202ENST00000409494 RBL2Q08999 1139 aa18.13■□□□□ 0.49
PCDHA13-202ENST00000409494 COASYQ13057 564 aa18.13■□□□□ 0.49
PCDHA13-202ENST00000409494 MXD4Q14582 209 aaPredicted RBP18.13■□□□□ 0.49
PCDHA13-202ENST00000409494 CEP57Q86XR8 500 aa18.13■□□□□ 0.49
PCDHA13-202ENST00000409494 GRAMD1CQ8IYS0 662 aa18.13■□□□□ 0.49
PCDHA13-202ENST00000409494 SIX6OS1Q8N1H7 587 aa18.13■□□□□ 0.49
PCDHA13-202ENST00000409494 OXER1Q8TDS5 423 aa18.13■□□□□ 0.49
PCDHA13-202ENST00000409494 FBXO41Q8TF61 875 aa18.13■□□□□ 0.49
PCDHA13-202ENST00000409494 NXF1Q9UBU9 619 aaKnown RBP18.13■□□□□ 0.49
PCDHA13-202ENST00000409494 ZNF189O75820 626 aaPredicted RBP18.13■□□□□ 0.49
PCDHA13-202ENST00000409494 MARK3P27448 753 aa18.13■□□□□ 0.49
PCDHA13-202ENST00000409494 GCLCP48506 637 aaPredicted RBP18.13■□□□□ 0.49
PCDHA13-202ENST00000409494 GTF2A2P52657 109 aa18.13■□□□□ 0.49
PCDHA13-202ENST00000409494 FKBP1CQ5VVH2 108 aa18.13■□□□□ 0.49
PCDHA13-202ENST00000409494 CASC4Q6P4E1 433 aa18.13■□□□□ 0.49
PCDHA13-202ENST00000409494 ZBTB33Q86T24 672 aa18.13■□□□□ 0.49
PCDHA13-202ENST00000409494 GPRC5AQ8NFJ5 357 aa18.13■□□□□ 0.49
PCDHA13-202ENST00000409494 ZMYND12Q9H0C1 365 aa18.13■□□□□ 0.49
PCDHA13-202ENST00000409494 GH1P01241 217 aa18.13■□□□□ 0.49
PCDHA13-202ENST00000409494 TXNP10599 105 aaKnown RBP18.13■□□□□ 0.49
PCDHA13-202ENST00000409494 PTPN21Q16825 1174 aa18.13■□□□□ 0.49
PCDHA13-202ENST00000409494 ERO1BQ86YB8 467 aa18.13■□□□□ 0.49
PCDHA13-202ENST00000409494 GCNAQ96QF7 691 aa18.13■□□□□ 0.49
PCDHA13-202ENST00000409494 CPVLQ9H3G5 476 aa18.13■□□□□ 0.49
PCDHA13-202ENST00000409494 EPB41L4AQ9HCS5 686 aaPredicted RBP18.13■□□□□ 0.49
PCDHA13-202ENST00000409494 DIS3Q9Y2L1 958 aaKnown RBP18.13■□□□□ 0.49
PCDHA13-202ENST00000409494 ABL1P00519 1130 aa18.12■□□□□ 0.49
PCDHA13-202ENST00000409494 RPLP2P05387 115 aaKnown RBP18.12■□□□□ 0.49
PCDHA13-202ENST00000409494 ECE1P42892 770 aa18.12■□□□□ 0.49
PCDHA13-202ENST00000409494 ZNF157P51786 506 aaPredicted RBP18.12■□□□□ 0.49
PCDHA13-202ENST00000409494 TMEM260Q9NX78 707 aa18.12■□□□□ 0.49
PCDHA13-202ENST00000409494 IFNB1P01574 187 aa18.12■□□□□ 0.49
PCDHA13-202ENST00000409494 NR3C2P08235 984 aa18.12■□□□□ 0.49
PCDHA13-202ENST00000409494 RFC5P40937 340 aa18.12■□□□□ 0.49
PCDHA13-202ENST00000409494 ZNF568Q3ZCX4 644 aa18.12■□□□□ 0.49
PCDHA13-202ENST00000409494 DEFB132Q7Z7B7 95 aa18.12■□□□□ 0.49
PCDHA13-202ENST00000409494 SMYD4Q8IYR2 804 aaPredicted RBP18.12■□□□□ 0.49
PCDHA13-202ENST00000409494 TMEM35BQ8NCS4 154 aa18.12■□□□□ 0.49
PCDHA13-202ENST00000409494 CEP72Q9P209 647 aa18.12■□□□□ 0.49
PCDHA13-202ENST00000409494 LGALS16A8MUM7 142 aa18.12■□□□□ 0.49
PCDHA13-202ENST00000409494 NFKBIAP25963 317 aa18.12■□□□□ 0.49
PCDHA13-202ENST00000409494 SMIM5Q71RC9 77 aa18.12■□□□□ 0.49
PCDHA13-202ENST00000409494 PALM2Q8IXS6 379 aa18.12■□□□□ 0.49
PCDHA13-202ENST00000409494 DAGLBQ8NCG7 672 aa18.12■□□□□ 0.49
PCDHA13-202ENST00000409494 SCFD2Q8WU76 684 aa18.12■□□□□ 0.49
PCDHA13-202ENST00000409494 SAMSN1Q9NSI8 373 aaKnown RBP18.12■□□□□ 0.49
PCDHA13-202ENST00000409494 POLLQ9UGP5 575 aa18.12■□□□□ 0.49
PCDHA13-202ENST00000409494 Q3C1V9 767 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms