RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 AMFRQ9UKV5 643 aa13.8□□□□□ -0.2
PPP4R1-202ENST00000400555 NOC2LQ9Y3T9 749 aaKnown RBP13.8□□□□□ -0.2
PPP4R1-202ENST00000400555 TISP43B9A030 160 aa13.8□□□□□ -0.2
PPP4R1-202ENST00000400555 MSH4O15457 936 aa13.8□□□□□ -0.2
PPP4R1-202ENST00000400555 VPS41P49754 854 aa13.8□□□□□ -0.2
PPP4R1-202ENST00000400555 GALCP54803 685 aa13.8□□□□□ -0.2
PPP4R1-202ENST00000400555 MESDQ14696 234 aa13.8□□□□□ -0.2
PPP4R1-202ENST00000400555 APOBEC3HQ6NTF7 200 aaKnown RBP13.8□□□□□ -0.2
PPP4R1-202ENST00000400555 PURBQ96QR8 312 aaKnown RBP13.8□□□□□ -0.2
PPP4R1-202ENST00000400555 TIAM2Q8IVF5 1701 aa13.8□□□□□ -0.2
PPP4R1-202ENST00000400555 SHANK3Q9BYB0 1731 aa13.8□□□□□ -0.2
PPP4R1-202ENST00000400555 PGRMC1O00264 195 aaKnown RBP13.8□□□□□ -0.2
PPP4R1-202ENST00000400555 BUB1BO60566 1050 aaPredicted RBP13.8□□□□□ -0.2
PPP4R1-202ENST00000400555 ACER1Q8TDN7 264 aa13.8□□□□□ -0.2
PPP4R1-202ENST00000400555 PPM1EQ8WY54 764 aa13.8□□□□□ -0.2
PPP4R1-202ENST00000400555 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.8□□□□□ -0.26e-7■■■□□ 18.3
PPP4R1-202ENST00000400555 TMOD2Q9NZR1 351 aa13.8□□□□□ -0.2
PPP4R1-202ENST00000400555 hCG_1984214I3L0E3 225 aa13.79□□□□□ -0.2
PPP4R1-202ENST00000400555 RAD17O75943 681 aa13.79□□□□□ -0.2
PPP4R1-202ENST00000400555 CHRNA5P30532 468 aa13.79□□□□□ -0.2
PPP4R1-202ENST00000400555 AARSP49588 968 aaKnown RBP eCLIP13.79□□□□□ -0.2
PPP4R1-202ENST00000400555 NSMFQ6X4W1 530 aa13.79□□□□□ -0.2
PPP4R1-202ENST00000400555 ZNF713Q8N859 430 aaPredicted RBP13.79□□□□□ -0.2
PPP4R1-202ENST00000400555 GLG1Q92896 1179 aa13.79□□□□□ -0.2
PPP4R1-202ENST00000400555 P2RX7Q99572 595 aaKnown RBP13.79□□□□□ -0.2
PPP4R1-202ENST00000400555 ACP6Q9NPH0 428 aa13.79□□□□□ -0.2
PPP4R1-202ENST00000400555 FBXO28Q9NVF7 368 aa13.79□□□□□ -0.2
PPP4R1-202ENST00000400555 FBXL5Q9UKA1 691 aa13.79□□□□□ -0.2
PPP4R1-202ENST00000400555 AJAP1Q9UKB5 411 aaPredicted RBP13.79□□□□□ -0.2
PPP4R1-202ENST00000400555 SNX24Q9Y343 169 aa13.79□□□□□ -0.2
PPP4R1-202ENST00000400555 PAPPAQ13219 1627 aa13.79□□□□□ -0.2
PPP4R1-202ENST00000400555 GOLGA6L7A0A1B0GV03 622 aa13.79□□□□□ -0.2
PPP4R1-202ENST00000400555 TULP2O00295 520 aa13.79□□□□□ -0.2
PPP4R1-202ENST00000400555 EVI5O60447 810 aa13.79□□□□□ -0.2
PPP4R1-202ENST00000400555 GCLMP48507 274 aa13.79□□□□□ -0.2
PPP4R1-202ENST00000400555 GTF2A1P52655 376 aaPredicted RBP13.79□□□□□ -0.2
PPP4R1-202ENST00000400555 ADCY1Q08828 1119 aa13.79□□□□□ -0.2
PPP4R1-202ENST00000400555 AADACL2Q6P093 401 aa13.79□□□□□ -0.2
PPP4R1-202ENST00000400555 USP38Q8NB14 1042 aa13.79□□□□□ -0.2
PPP4R1-202ENST00000400555 CCDC17Q96LX7 622 aa13.79□□□□□ -0.2
PPP4R1-202ENST00000400555 UBE2TQ9NPD8 197 aaPredicted RBP13.79□□□□□ -0.2
PPP4R1-202ENST00000400555 ATMINO43313 823 aaPredicted RBP13.79□□□□□ -0.2
PPP4R1-202ENST00000400555 MYCLP12524 364 aaPredicted RBP13.79□□□□□ -0.2
PPP4R1-202ENST00000400555 AOC3Q16853 763 aa13.79□□□□□ -0.2
PPP4R1-202ENST00000400555 PACS2Q86VP3 889 aa13.79□□□□□ -0.2
PPP4R1-202ENST00000400555 GPATCH11Q8N954 259 aa13.79□□□□□ -0.2
PPP4R1-202ENST00000400555 ZNF233A6NK53 670 aa13.78□□□□□ -0.2
PPP4R1-202ENST00000400555 CCDC169A6NNP5 214 aa13.78□□□□□ -0.2
PPP4R1-202ENST00000400555 MEIS2O14770 477 aa13.78□□□□□ -0.2
PPP4R1-202ENST00000400555 POLD1P28340 1107 aa13.78□□□□□ -0.2
PPP4R1-202ENST00000400555 HNRNPH3P31942 346 aaKnown RBP13.78□□□□□ -0.2
PPP4R1-202ENST00000400555 MAGEA9P43362 315 aa13.78□□□□□ -0.2
PPP4R1-202ENST00000400555 ERVK-9P63128 1117 aa13.78□□□□□ -0.2
PPP4R1-202ENST00000400555 ALS2CLQ60I27 953 aa13.78□□□□□ -0.2
PPP4R1-202ENST00000400555 CPLX4Q7Z7G2 160 aa13.78□□□□□ -0.2
PPP4R1-202ENST00000400555 RBM46Q8TBY0 533 aaKnown RBP13.78□□□□□ -0.2
PPP4R1-202ENST00000400555 LMBR1Q8WVP7 490 aa13.78□□□□□ -0.2
PPP4R1-202ENST00000400555 PPP1R1BQ9UD71 204 aaPredicted RBP13.78□□□□□ -0.2
PPP4R1-202ENST00000400555 UTP11Q9Y3A2 253 aaKnown RBP13.78□□□□□ -0.2
PPP4R1-202ENST00000400555 ROBO1Q9Y6N7 1651 aa13.78□□□□□ -0.2
PPP4R1-202ENST00000400555 TMEM150BA6NC51 233 aa13.78□□□□□ -0.2
PPP4R1-202ENST00000400555 K7ENM7 598 aa13.78□□□□□ -0.2
PPP4R1-202ENST00000400555 EIF3HO15372 352 aaKnown RBP eCLIP13.78□□□□□ -0.2
PPP4R1-202ENST00000400555 GABPAQ06546 454 aa13.78□□□□□ -0.2
PPP4R1-202ENST00000400555 PPM1KQ8N3J5 372 aa13.78□□□□□ -0.2
PPP4R1-202ENST00000400555 FAM84AQ96KN4 292 aa13.78□□□□□ -0.2
PPP4R1-202ENST00000400555 IFNAR2P48551 515 aa13.78□□□□□ -0.2
PPP4R1-202ENST00000400555 MEI1Q5TIA1 1274 aa13.78□□□□□ -0.2
PPP4R1-202ENST00000400555 MGARPQ8TDB4 240 aa13.78□□□□□ -0.2
PPP4R1-202ENST00000400555 ZNF577Q9BSK1 485 aa13.78□□□□□ -0.2
PPP4R1-202ENST00000400555 KCTD10Q9H3F6 313 aa13.78□□□□□ -0.2
PPP4R1-202ENST00000400555 CASZ1Q86V15 1759 aa13.77□□□□□ -0.2
PPP4R1-202ENST00000400555 PSMC2P35998 433 aaKnown RBP13.77□□□□□ -0.2
PPP4R1-202ENST00000400555 FLT3P36888 993 aa13.77□□□□□ -0.2
PPP4R1-202ENST00000400555 USP11P51784 963 aa13.77□□□□□ -0.2
PPP4R1-202ENST00000400555 SLC12A3P55017 1021 aa13.77□□□□□ -0.2
PPP4R1-202ENST00000400555 CCDC26Q8TAB7 109 aa13.77□□□□□ -0.2
PPP4R1-202ENST00000400555 IPO4Q8TEX9 1081 aaKnown RBP13.77□□□□□ -0.2
PPP4R1-202ENST00000400555 DNAJC18Q9H819 358 aa13.77□□□□□ -0.2
PPP4R1-202ENST00000400555 SSTR3P32745 418 aaPredicted RBP13.77□□□□□ -0.21
PPP4R1-202ENST00000400555 NBPF9Q3BBW0 867 aa13.77□□□□□ -0.21
PPP4R1-202ENST00000400555 ZCWPW2Q504Y3 356 aa13.77□□□□□ -0.21
PPP4R1-202ENST00000400555 SP8Q8IXZ3 490 aa13.77□□□□□ -0.21
PPP4R1-202ENST00000400555 SLC35G2Q8TBE7 412 aa13.77□□□□□ -0.21
PPP4R1-202ENST00000400555 MDM1Q8TC05 714 aa13.77□□□□□ -0.21
PPP4R1-202ENST00000400555 TAF1DQ9H5J8 278 aaPredicted RBP13.77□□□□□ -0.21
PPP4R1-202ENST00000400555 PARVGQ9HBI0 331 aa13.77□□□□□ -0.21
PPP4R1-202ENST00000400555 GAKO14976 1311 aa13.77□□□□□ -0.21
PPP4R1-202ENST00000400555 SPOPO43791 374 aa13.77□□□□□ -0.21
PPP4R1-202ENST00000400555 SMARCA1P28370 1054 aa13.77□□□□□ -0.21
PPP4R1-202ENST00000400555 TADA2BQ86TJ2 420 aa13.77□□□□□ -0.21
PPP4R1-202ENST00000400555 GJD4Q96KN9 370 aaPredicted RBP13.77□□□□□ -0.21
PPP4R1-202ENST00000400555 ABCB11O95342 1321 aa13.77□□□□□ -0.21
PPP4R1-202ENST00000400555 ROBO3Q96MS0 1386 aa13.77□□□□□ -0.21
PPP4R1-202ENST00000400555 ANKRD36CQ5JPF3 1778 aa13.76□□□□□ -0.21
PPP4R1-202ENST00000400555 SPATA31C1P0DKV0 1188 aa13.76□□□□□ -0.21
PPP4R1-202ENST00000400555 RPA1P27694 616 aa13.76□□□□□ -0.21
PPP4R1-202ENST00000400555 SNX1Q13596 522 aa13.76□□□□□ -0.21
PPP4R1-202ENST00000400555 ASTE1Q2TB18 679 aaPredicted RBP13.76□□□□□ -0.21
PPP4R1-202ENST00000400555 RINT1Q6NUQ1 792 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms