RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 ERC2O15083 957 aa6.5□□□□□ -1.37
HMGB1P10-201ENST00000395823 SPINK2P20155 84 aa6.5□□□□□ -1.37
HMGB1P10-201ENST00000395823 AOAHP28039 575 aa6.5□□□□□ -1.37
HMGB1P10-201ENST00000395823 FXR1P51114 621 aaKnown RBP eCLIP6.5□□□□□ -1.37
HMGB1P10-201ENST00000395823 HERVK_113P62684 666 aa6.5□□□□□ -1.37
HMGB1P10-201ENST00000395823 ADCY1Q08828 1119 aa6.5□□□□□ -1.37
HMGB1P10-201ENST00000395823 PAN2Q504Q3 1202 aaKnown RBP6.5□□□□□ -1.37
HMGB1P10-201ENST00000395823 GORABQ5T7V8 394 aa6.5□□□□□ -1.37
HMGB1P10-201ENST00000395823 PPP4R4Q6NUP7 873 aa6.5□□□□□ -1.37
HMGB1P10-201ENST00000395823 SLC23A3Q6PIS1 610 aa6.5□□□□□ -1.37
HMGB1P10-201ENST00000395823 ESPNLQ6ZVH7 1005 aa6.5□□□□□ -1.37
HMGB1P10-201ENST00000395823 MILR1Q7Z6M3 343 aa6.5□□□□□ -1.37
HMGB1P10-201ENST00000395823 VSIG10LQ86VR7 867 aa6.5□□□□□ -1.37
HMGB1P10-201ENST00000395823 NME9Q86XW9 330 aa6.5□□□□□ -1.37
HMGB1P10-201ENST00000395823 TRIM48Q8IWZ4 208 aa6.5□□□□□ -1.37
HMGB1P10-201ENST00000395823 C7orf31Q8N865 590 aa6.5□□□□□ -1.37
HMGB1P10-201ENST00000395823 ERCC4Q92889 916 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P10-201ENST00000395823 MPHOSPH6Q99547 160 aaKnown RBP6.5□□□□□ -1.37
HMGB1P10-201ENST00000395823 MYL10Q9BUA6 226 aa6.5□□□□□ -1.37
HMGB1P10-201ENST00000395823 AP5M1Q9H0R1 490 aa6.5□□□□□ -1.37
HMGB1P10-201ENST00000395823 MYH16Q9H6N6 1097 aa6.5□□□□□ -1.37
HMGB1P10-201ENST00000395823 NMRK2Q9NPI5 230 aa6.5□□□□□ -1.37
HMGB1P10-201ENST00000395823 CCDC39Q9UFE4 941 aa6.5□□□□□ -1.37
HMGB1P10-201ENST00000395823 A0A1W2PQJ5 194 aa6.49□□□□□ -1.37
HMGB1P10-201ENST00000395823 ZC3H12DA2A288 527 aaKnown RBP6.49□□□□□ -1.37
HMGB1P10-201ENST00000395823 A6NNZ2 444 aa6.49□□□□□ -1.37
HMGB1P10-201ENST00000395823 GOLGA6L22H0YM25 854 aa6.49□□□□□ -1.37
HMGB1P10-201ENST00000395823 AP1G1O43747 822 aa6.49□□□□□ -1.37
HMGB1P10-201ENST00000395823 MPIG6BO95866 241 aa6.49□□□□□ -1.37
HMGB1P10-201ENST00000395823 PRLP01236 227 aa6.49□□□□□ -1.37
HMGB1P10-201ENST00000395823 LPLP06858 475 aa6.49□□□□□ -1.37
HMGB1P10-201ENST00000395823 PNLIPP16233 465 aa6.49□□□□□ -1.37
HMGB1P10-201ENST00000395823 VCAM1P19320 739 aa6.49□□□□□ -1.37
HMGB1P10-201ENST00000395823 MC4RP32245 332 aa6.49□□□□□ -1.37
HMGB1P10-201ENST00000395823 GDNFP39905 211 aa6.49□□□□□ -1.37
HMGB1P10-201ENST00000395823 ADKP55263 362 aaKnown RBP6.49□□□□□ -1.37
HMGB1P10-201ENST00000395823 HDAC1Q13547 482 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P10-201ENST00000395823 UGT8Q16880 541 aa6.49□□□□□ -1.37
HMGB1P10-201ENST00000395823 ARHGAP29Q52LW3 1261 aa6.49□□□□□ -1.37
HMGB1P10-201ENST00000395823 IFIT1BQ5T764 474 aaKnown RBP6.49□□□□□ -1.37
HMGB1P10-201ENST00000395823 INTS5Q6P9B9 1019 aaKnown RBP6.49□□□□□ -1.37
HMGB1P10-201ENST00000395823 UNQ6494/PRO21346Q6UXR6 183 aa6.49□□□□□ -1.37
HMGB1P10-201ENST00000395823 CATIPQ7Z7H3 387 aa6.49□□□□□ -1.37
HMGB1P10-201ENST00000395823 DTX1Q86Y01 620 aa6.49□□□□□ -1.37
HMGB1P10-201ENST00000395823 SAMD3Q8N6K7 520 aa6.49□□□□□ -1.37
HMGB1P10-201ENST00000395823 SLC35G2Q8TBE7 412 aa6.49□□□□□ -1.37
HMGB1P10-201ENST00000395823 TSPEARQ8WU66 669 aa6.49□□□□□ -1.37
HMGB1P10-201ENST00000395823 SSH1Q8WYL5 1049 aa6.49□□□□□ -1.37
HMGB1P10-201ENST00000395823 GTPBP4Q9BZE4 634 aaKnown RBP6.49□□□□□ -1.37
HMGB1P10-201ENST00000395823 GPR160Q9UJ42 338 aa6.49□□□□□ -1.37
HMGB1P10-201ENST00000395823 DNM3Q9UQ16 869 aa6.49□□□□□ -1.37
HMGB1P10-201ENST00000395823 HCFC2Q9Y5Z7 792 aa6.49□□□□□ -1.37
HMGB1P10-201ENST00000395823 UBA6A0AVT1 1052 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P10-201ENST00000395823 APAF1O14727 1248 aa6.48□□□□□ -1.37
HMGB1P10-201ENST00000395823 COBLO75128 1261 aa6.48□□□□□ -1.37
HMGB1P10-201ENST00000395823 NDUFS2O75306 463 aa6.48□□□□□ -1.37
HMGB1P10-201ENST00000395823 PRPF6O94906 941 aaKnown RBP6.48□□□□□ -1.37
HMGB1P10-201ENST00000395823 CYBBP04839 570 aa6.48□□□□□ -1.37
HMGB1P10-201ENST00000395823 FAHP16930 419 aa6.48□□□□□ -1.37
HMGB1P10-201ENST00000395823 HSPA6P17066 643 aa6.48□□□□□ -1.37
HMGB1P10-201ENST00000395823 SDHBP21912 280 aa6.48□□□□□ -1.37
HMGB1P10-201ENST00000395823 AKAP5P24588 427 aa6.48□□□□□ -1.37
HMGB1P10-201ENST00000395823 ITGB7P26010 798 aa6.48□□□□□ -1.37
HMGB1P10-201ENST00000395823 MRPS9P82933 396 aaKnown RBP6.48□□□□□ -1.37
HMGB1P10-201ENST00000395823 DBPQ10586 325 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P10-201ENST00000395823 TRIM25Q14258 630 aaKnown RBP6.48□□□□□ -1.37
HMGB1P10-201ENST00000395823 MUM1Q2TAK8 710 aa6.48□□□□□ -1.37
HMGB1P10-201ENST00000395823 LILRA6Q6PI73 481 aa6.48□□□□□ -1.37
HMGB1P10-201ENST00000395823 KANSL1Q7Z3B3 1105 aa6.48□□□□□ -1.37
HMGB1P10-201ENST00000395823 PHYKPLQ8IUZ5 450 aa6.48□□□□□ -1.37
HMGB1P10-201ENST00000395823 SLC41A1Q8IVJ1 513 aa6.48□□□□□ -1.37
HMGB1P10-201ENST00000395823 SMC5Q8IY18 1101 aa6.48□□□□□ -1.37
HMGB1P10-201ENST00000395823 FLCNQ8NFG4 579 aa6.48□□□□□ -1.37
HMGB1P10-201ENST00000395823 PJA1Q8NG27 643 aa6.48□□□□□ -1.37
HMGB1P10-201ENST00000395823 PEX11GQ96HA9 241 aa6.48□□□□□ -1.37
HMGB1P10-201ENST00000395823 KCTD10Q9H3F6 313 aa6.48□□□□□ -1.37
HMGB1P10-201ENST00000395823 MBNL3Q9NUK0 354 aaKnown RBP6.48□□□□□ -1.37
HMGB1P10-201ENST00000395823 SAP30BPQ9UHR5 308 aaKnown RBP6.48□□□□□ -1.37
HMGB1P10-201ENST00000395823 ASB1Q9Y576 335 aa6.48□□□□□ -1.37
HMGB1P10-201ENST00000395823 FRMPD2Q68DX3 1309 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P10-201ENST00000395823 PRAMEF22A3QJZ6 481 aa6.47□□□□□ -1.37
HMGB1P10-201ENST00000395823 MSTNO14793 375 aa6.47□□□□□ -1.37
HMGB1P10-201ENST00000395823 PFKMP08237 780 aa6.47□□□□□ -1.37
HMGB1P10-201ENST00000395823 CELA3BP08861 270 aa6.47□□□□□ -1.37
HMGB1P10-201ENST00000395823 MYBP10242 640 aa6.47□□□□□ -1.37
HMGB1P10-201ENST00000395823 CD97P48960 835 aa6.47□□□□□ -1.37
HMGB1P10-201ENST00000395823 USP14P54578 494 aa6.47□□□□□ -1.37
HMGB1P10-201ENST00000395823 TTC38Q5R3I4 469 aa6.47□□□□□ -1.37
HMGB1P10-201ENST00000395823 ATAT1Q5SQI0 421 aa6.47□□□□□ -1.37
HMGB1P10-201ENST00000395823 PRAMEF18Q5VWM3 479 aa6.47□□□□□ -1.37
HMGB1P10-201ENST00000395823 IL31Q6EBC2 164 aa6.47□□□□□ -1.37
HMGB1P10-201ENST00000395823 PAQR3Q6TCH7 311 aa6.47□□□□□ -1.37
HMGB1P10-201ENST00000395823 HIPK4Q8NE63 616 aa6.47□□□□□ -1.37
HMGB1P10-201ENST00000395823 FBXO41Q8TF61 875 aa6.47□□□□□ -1.37
HMGB1P10-201ENST00000395823 HPS3Q969F9 1004 aa6.47□□□□□ -1.37
HMGB1P10-201ENST00000395823 MAML3Q96JK9 1138 aa6.47□□□□□ -1.37
HMGB1P10-201ENST00000395823 CSRNP2Q9H175 543 aa6.47□□□□□ -1.37
HMGB1P10-201ENST00000395823 WNT8AQ9H1J5 351 aa6.47□□□□□ -1.37
HMGB1P10-201ENST00000395823 DDX21Q9NR30 783 aaKnown RBP eCLIP6.47□□□□□ -1.37
HMGB1P10-201ENST00000395823 RCAN3Q9UKA8 241 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms