RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 GRIN2DO15399 1336 aa19.33■□□□□ 0.68
GYPC-202ENST00000356887 RSPH10B2B2RC85 870 aa19.32■□□□□ 0.68
GYPC-202ENST00000356887 EIF3HO15372 352 aaKnown RBP eCLIP19.32■□□□□ 0.68
GYPC-202ENST00000356887 SLC16A3O15427 465 aaKnown RBP19.32■□□□□ 0.68
GYPC-202ENST00000356887 NR3C1P04150 777 aa19.32■□□□□ 0.68
GYPC-202ENST00000356887 RSPH10BP0C881 870 aa19.32■□□□□ 0.68
GYPC-202ENST00000356887 TNNC1P63316 161 aa19.32■□□□□ 0.68
GYPC-202ENST00000356887 CFAP58Q5T655 872 aa19.32■□□□□ 0.68
GYPC-202ENST00000356887 PIK3R5Q8WYR1 880 aa19.32■□□□□ 0.68
GYPC-202ENST00000356887 POLR3CQ9BUI4 534 aaPredicted RBP19.32■□□□□ 0.68
GYPC-202ENST00000356887 ATP8B3O60423 1300 aa19.32■□□□□ 0.68
GYPC-202ENST00000356887 SPDYE3A6NKU9 549 aa19.32■□□□□ 0.68
GYPC-202ENST00000356887 G3V3G9 751 aa19.32■□□□□ 0.68
GYPC-202ENST00000356887 RAD51CO43502 376 aa19.32■□□□□ 0.68
GYPC-202ENST00000356887 NPR1P16066 1061 aa19.32■□□□□ 0.68
GYPC-202ENST00000356887 RPL13P26373 211 aaKnown RBP19.32■□□□□ 0.68
GYPC-202ENST00000356887 MAGEA9P43362 315 aa19.32■□□□□ 0.68
GYPC-202ENST00000356887 JAM2P57087 298 aa19.32■□□□□ 0.68
GYPC-202ENST00000356887 GNGT1P63211 74 aa19.32■□□□□ 0.68
GYPC-202ENST00000356887 ICA1Q05084 483 aa19.32■□□□□ 0.68
GYPC-202ENST00000356887 IFI16Q16666 785 aaKnown RBP19.32■□□□□ 0.68
GYPC-202ENST00000356887 DCAF8Q5TAQ9 597 aa19.32■□□□□ 0.68
GYPC-202ENST00000356887 ALKBH5Q6P6C2 394 aaKnown RBP19.32■□□□□ 0.68
GYPC-202ENST00000356887 CD302Q8IX05 232 aa19.32■□□□□ 0.68
GYPC-202ENST00000356887 GMCL1P1Q8NEA9 526 aa19.32■□□□□ 0.68
GYPC-202ENST00000356887 WHAMMQ8TF30 809 aa19.32■□□□□ 0.68
GYPC-202ENST00000356887 SCFD2Q8WU76 684 aa19.32■□□□□ 0.68
GYPC-202ENST00000356887 GMCL1Q96IK5 515 aa19.32■□□□□ 0.68
GYPC-202ENST00000356887 IDI2Q9BXS1 227 aa19.32■□□□□ 0.68
GYPC-202ENST00000356887 ZNF233A6NK53 670 aa19.31■□□□□ 0.68
GYPC-202ENST00000356887 KCNK3O14649 394 aa19.31■□□□□ 0.68
GYPC-202ENST00000356887 EYA4O95677 639 aa19.31■□□□□ 0.68
GYPC-202ENST00000356887 ZBTB48P10074 688 aaPredicted RBP19.31■□□□□ 0.68
GYPC-202ENST00000356887 CASP4P49662 377 aa19.31■□□□□ 0.68
GYPC-202ENST00000356887 TRADDQ15628 312 aa19.31■□□□□ 0.68
GYPC-202ENST00000356887 USH1GQ495M9 461 aa19.31■□□□□ 0.68
GYPC-202ENST00000356887 SYDE2Q5VT97 1194 aa19.31■□□□□ 0.68
GYPC-202ENST00000356887 TMEM179Q6ZVK1 233 aa19.31■□□□□ 0.68
GYPC-202ENST00000356887 SLC35C1Q96A29 364 aa19.31■□□□□ 0.68
GYPC-202ENST00000356887 RUSC1Q9BVN2 902 aa19.31■□□□□ 0.68
GYPC-202ENST00000356887 BHMT2Q9H2M3 363 aa19.31■□□□□ 0.68
GYPC-202ENST00000356887 BCAS3Q9H6U6 928 aa19.31■□□□□ 0.68
GYPC-202ENST00000356887 KCNQ5Q9NR82 932 aa19.31■□□□□ 0.68
GYPC-202ENST00000356887 AJAP1Q9UKB5 411 aaPredicted RBP19.31■□□□□ 0.68
GYPC-202ENST00000356887 NDUFB10O96000 172 aa19.31■□□□□ 0.68
GYPC-202ENST00000356887 CYP3A4P08684 503 aa19.31■□□□□ 0.68
GYPC-202ENST00000356887 DCAF17Q5H9S7 520 aaPredicted RBP19.31■□□□□ 0.68
GYPC-202ENST00000356887 ACTRT1Q8TDG2 376 aa19.31■□□□□ 0.68
GYPC-202ENST00000356887 EIF2AK1Q9BQI3 630 aaKnown RBP19.31■□□□□ 0.68
GYPC-202ENST00000356887 PDGFDQ9GZP0 370 aaPredicted RBP19.31■□□□□ 0.68
GYPC-202ENST00000356887 A6NNZ2 444 aa19.3■□□□□ 0.68
GYPC-202ENST00000356887 EML1O00423 815 aa19.3■□□□□ 0.68
GYPC-202ENST00000356887 OPLAHO14841 1288 aa19.3■□□□□ 0.68
GYPC-202ENST00000356887 FLOT1O75955 427 aa19.3■□□□□ 0.68
GYPC-202ENST00000356887 NOP2P46087 812 aaKnown RBP19.3■□□□□ 0.68
GYPC-202ENST00000356887 GUCY2FP51841 1108 aa19.3■□□□□ 0.68
GYPC-202ENST00000356887 CYP4A11Q02928 519 aa19.3■□□□□ 0.68
GYPC-202ENST00000356887 TUBB8Q3ZCM7 444 aa19.3■□□□□ 0.68
GYPC-202ENST00000356887 CCDC125Q86Z20 511 aa19.3■□□□□ 0.68
GYPC-202ENST00000356887 KLHL7Q8IXQ5 586 aa19.3■□□□□ 0.68
GYPC-202ENST00000356887 KCTD17Q8N5Z5 321 aa19.3■□□□□ 0.68
GYPC-202ENST00000356887 EIF1ADQ8N9N8 165 aaKnown RBP19.3■□□□□ 0.68
GYPC-202ENST00000356887 TPCN2Q8NHX9 752 aa19.3■□□□□ 0.68
GYPC-202ENST00000356887 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.3■□□□□ 0.685e-8■■■■■ 65.3
GYPC-202ENST00000356887 BORCS6Q96GS4 357 aa19.3■□□□□ 0.68
GYPC-202ENST00000356887 GTPBP10A4D1E9 387 aaKnown RBP19.29■□□□□ 0.68
GYPC-202ENST00000356887 TBCAO75347 108 aaKnown RBP19.29■□□□□ 0.68
GYPC-202ENST00000356887 GCNT3O95395 438 aa19.29■□□□□ 0.68
GYPC-202ENST00000356887 TCERG1LQ5VWI1 586 aa19.29■□□□□ 0.68
GYPC-202ENST00000356887 PODNQ7Z5L7 613 aa19.29■□□□□ 0.68
GYPC-202ENST00000356887 DNAAF5Q86Y56 855 aa19.29■□□□□ 0.68
GYPC-202ENST00000356887 CYP2W1Q8TAV3 490 aa19.29■□□□□ 0.68
GYPC-202ENST00000356887 CNKSR2Q8WXI2 1034 aa19.29■□□□□ 0.68
GYPC-202ENST00000356887 ISCUQ9H1K1 167 aa19.29■□□□□ 0.68
GYPC-202ENST00000356887 POLD4Q9HCU8 107 aa19.29■□□□□ 0.68
GYPC-202ENST00000356887 OLFML3Q9NRN5 406 aa19.29■□□□□ 0.68
GYPC-202ENST00000356887 RABGAP1Q9Y3P9 1069 aa19.29■□□□□ 0.68
GYPC-202ENST00000356887 COL11A2P13942 1736 aaPredicted RBP19.29■□□□□ 0.68
GYPC-202ENST00000356887 A0A0A6YYK5 440 aaPredicted RBP19.29■□□□□ 0.68
GYPC-202ENST00000356887 BHMG1C9JSJ3 638 aaPredicted RBP19.29■□□□□ 0.68
GYPC-202ENST00000356887 CLIC2O15247 247 aa19.29■□□□□ 0.68
GYPC-202ENST00000356887 TGFB1I1O43294 461 aa19.29■□□□□ 0.68
GYPC-202ENST00000356887 NPM3O75607 178 aaKnown RBP19.29■□□□□ 0.68
GYPC-202ENST00000356887 KRT14P02533 472 aa19.29■□□□□ 0.68
GYPC-202ENST00000356887 GAP43P17677 238 aa19.29■□□□□ 0.68
GYPC-202ENST00000356887 ALDH1B1P30837 517 aa19.29■□□□□ 0.68
GYPC-202ENST00000356887 HSPA9P38646 679 aaKnown RBP19.29■□□□□ 0.68
GYPC-202ENST00000356887 CCT5P48643 541 aa19.29■□□□□ 0.68
GYPC-202ENST00000356887 KCNA1Q09470 495 aa19.29■□□□□ 0.68
GYPC-202ENST00000356887 ABCB5Q2M3G0 1257 aa19.29■□□□□ 0.68
GYPC-202ENST00000356887 EMC10Q5UCC4 262 aa19.29■□□□□ 0.68
GYPC-202ENST00000356887 RINT1Q6NUQ1 792 aa19.29■□□□□ 0.68
GYPC-202ENST00000356887 BTNL9Q6UXG8 535 aa19.29■□□□□ 0.68
GYPC-202ENST00000356887 SLFN11Q7Z7L1 901 aa19.29■□□□□ 0.68
GYPC-202ENST00000356887 KIAA0825Q8IV33 1275 aa19.29■□□□□ 0.68
GYPC-202ENST00000356887 C1orf131Q8NDD1 294 aaKnown RBP19.29■□□□□ 0.68
GYPC-202ENST00000356887 GOLPH3Q9H4A6 298 aa19.29■□□□□ 0.68
GYPC-202ENST00000356887 TAF1DQ9H5J8 278 aaPredicted RBP19.29■□□□□ 0.68
GYPC-202ENST00000356887 RGL1Q9NZL6 768 aa19.29■□□□□ 0.68
GYPC-202ENST00000356887 INTUQ9ULD6 942 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms