RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 PLPP6Q8IY26 295 aa9.27□□□□□ -0.93
TDP1-201ENST00000335725 PAF1Q8N7H5 531 aa9.27□□□□□ -0.93
TDP1-201ENST00000335725 ZNF184Q99676 751 aaPredicted RBP9.27□□□□□ -0.93
TDP1-201ENST00000335725 STK33Q9BYT3 514 aa9.27□□□□□ -0.93
TDP1-201ENST00000335725 PLGRKTQ9HBL7 147 aa9.27□□□□□ -0.93
TDP1-201ENST00000335725 RNF14Q9UBS8 474 aa9.27□□□□□ -0.93
TDP1-201ENST00000335725 TSKSQ9UJT2 592 aa9.27□□□□□ -0.93
TDP1-201ENST00000335725 NFE2L3Q9Y4A8 694 aa9.27□□□□□ -0.93
TDP1-201ENST00000335725 A6NJR5 290 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 PIK3CDO00329 1044 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 PDE2AO00408 941 aaPredicted RBP9.26□□□□□ -0.93
TDP1-201ENST00000335725 SNX3O60493 162 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 FARP2O94887 1054 aaPredicted RBP9.26□□□□□ -0.93
TDP1-201ENST00000335725 UNC5CO95185 931 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 KRT75O95678 551 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 ZCCHC18P0CG32 403 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 CHRNB1P11230 501 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 PLCG2P16885 1265 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 ZNF18P17022 549 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 EIF2B2P49770 351 aaKnown RBP9.26□□□□□ -0.93
TDP1-201ENST00000335725 CCR3P51677 355 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 LURAP1LQ8IV03 231 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 SPARTQ8N0X7 666 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 LINC00469Q8N7U9 141 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 CALML6Q8TD86 181 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 INPP5DQ92835 1189 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 DYDC2Q96IM9 177 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 PPP1R10Q96QC0 940 aaKnown RBP9.26□□□□□ -0.93
TDP1-201ENST00000335725 HAUS8Q9BT25 410 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 CCDC134Q9H6E4 229 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 CFDP1Q9UEE9 299 aaPredicted RBP9.26□□□□□ -0.93
TDP1-201ENST00000335725 DSEQ9UL01 958 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 EXOC7Q9UPT5 735 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 ARL2BPQ9Y2Y0 163 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 CD109Q6YHK3 1445 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 CDK12Q9NYV4 1490 aaPredicted RBP9.26□□□□□ -0.93
TDP1-201ENST00000335725 E9PMD0 336 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 S100BP04271 92 aaPredicted RBP9.26□□□□□ -0.93
TDP1-201ENST00000335725 MAGOHP61326 146 aaKnown RBP9.26□□□□□ -0.93
TDP1-201ENST00000335725 AP1B1Q10567 949 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 NONOQ15233 471 aaKnown RBP eCLIP9.26□□□□□ -0.93
TDP1-201ENST00000335725 ANO5Q75V66 913 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 MAGOHBQ96A72 148 aaKnown RBP9.26□□□□□ -0.93
TDP1-201ENST00000335725 SPOCK3Q9BQ16 436 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 LLPHQ9BRT6 129 aaKnown RBP9.26□□□□□ -0.93
TDP1-201ENST00000335725 USP20Q9Y2K6 914 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 KDM5AP29375 1690 aaKnown RBP9.26□□□□□ -0.93
TDP1-201ENST00000335725 CHD2O14647 1828 aaKnown RBP9.26□□□□□ -0.93
TDP1-201ENST00000335725 A0A088AWK7 358 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 ARID3CA6NKF2 412 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 NDUFA10O95299 355 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 COL6A2P12110 1019 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 DDX5P17844 614 aaKnown RBP9.26□□□□□ -0.93
TDP1-201ENST00000335725 CCDC62Q6P9F0 684 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 C1orf228Q6PIY5 440 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 LRRC34Q8IZ02 419 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 ARHGAP24Q8N264 748 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 HSPBAP1Q96EW2 488 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 UNKQ9C0B0 810 aaKnown RBP9.26□□□□□ -0.93
TDP1-201ENST00000335725 LRMDAQ9H2I8 198 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 PSTPIP2Q9H939 334 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 SNX12Q9UMY4 172 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 EID1Q9Y6B2 187 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 SBNO1A3KN83 1393 aa9.26□□□□□ -0.93
TDP1-201ENST00000335725 NESP48681 1621 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 ANKRD34BA5PLL1 514 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 KIF28PB7ZC32 967 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 OPHN1O60890 802 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 CMA1P23946 247 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 EIF3BP55884 814 aaKnown RBP9.25□□□□□ -0.93
TDP1-201ENST00000335725 NAA20P61599 178 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 IRF5Q13568 498 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 BEND3Q5T5X7 828 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 ENAHQ8N8S7 591 aaPredicted RBP9.25□□□□□ -0.93
TDP1-201ENST00000335725 SLC17A8Q8NDX2 589 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 GIPC3Q8TF64 312 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 EME1Q96AY2 570 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 DPH5Q9H2P9 285 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 SQORQ9Y6N5 450 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 RNF17Q9BXT8 1623 aaKnown RBP9.25□□□□□ -0.93
TDP1-201ENST00000335725 H0Y3Z8 333 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 CPLX1O14810 134 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 HAT1O14929 419 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 MTA2O94776 668 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 ATP5DP30049 168 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 FOSBP53539 338 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 SLC34A1Q06495 639 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 NMIQ13287 307 aaPredicted RBP9.25□□□□□ -0.93
TDP1-201ENST00000335725 EZH2Q15910 746 aaKnown RBP9.25□□□□□ -0.93
TDP1-201ENST00000335725 LVRNQ6Q4G3 990 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 LRRC74BQ6ZQY2 392 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 TMTC3Q6ZXV5 915 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 HDGFL2Q7Z4V5 671 aaPredicted RBP9.25□□□□□ -0.93
TDP1-201ENST00000335725 SFR1Q86XK3 245 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 OSCP1Q8WVF1 389 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 ANKRD49Q8WVL7 239 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 LPIN2Q92539 896 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 OTUD5Q96G74 571 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 GIN1Q9NXP7 522 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 CNOT8Q9UFF9 292 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms