RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 NOP53Q9NZM5 478 aaKnown RBP17.66■□□□□ 0.42
CCDC8-201ENST00000307522 ZMYND8Q9ULU4 1186 aaPredicted RBP17.66■□□□□ 0.42
CCDC8-201ENST00000307522 BCORQ6W2J9 1755 aa17.66■□□□□ 0.42
CCDC8-201ENST00000307522 NPR1P16066 1061 aa17.66■□□□□ 0.42
CCDC8-201ENST00000307522 PECAM1P16284 738 aaPredicted RBP17.66■□□□□ 0.42
CCDC8-201ENST00000307522 RWDD2BP57060 319 aa17.66■□□□□ 0.42
CCDC8-201ENST00000307522 TAF11Q15544 211 aa17.66■□□□□ 0.42
CCDC8-201ENST00000307522 PFKFB3Q16875 520 aaPredicted RBP17.66■□□□□ 0.42
CCDC8-201ENST00000307522 BLIDQ8IZY5 108 aa17.66■□□□□ 0.42
CCDC8-201ENST00000307522 PRMT1Q99873 361 aaKnown RBP17.66■□□□□ 0.42
CCDC8-201ENST00000307522 TSGA10Q9BZW7 698 aa17.66■□□□□ 0.42
CCDC8-201ENST00000307522 PSMA7O14818 248 aa17.66■□□□□ 0.42
CCDC8-201ENST00000307522 ECE2O60344 883 aa17.66■□□□□ 0.42
CCDC8-201ENST00000307522 STK4Q13043 487 aa17.66■□□□□ 0.42
CCDC8-201ENST00000307522 SBK1Q52WX2 424 aa17.66■□□□□ 0.42
CCDC8-201ENST00000307522 MIGA2Q7L4E1 593 aa17.66■□□□□ 0.42
CCDC8-201ENST00000307522 CRAMP1Q96RY5 1269 aa17.66■□□□□ 0.42
CCDC8-201ENST00000307522 H0Y3Z8 333 aa17.65■□□□□ 0.42
CCDC8-201ENST00000307522 H0YGN5 161 aa17.65■□□□□ 0.42
CCDC8-201ENST00000307522 DDAH1O94760 285 aa17.65■□□□□ 0.42
CCDC8-201ENST00000307522 LRRC15Q8TF66 581 aa17.65■□□□□ 0.42
CCDC8-201ENST00000307522 NDST4Q9H3R1 872 aa17.65■□□□□ 0.42
CCDC8-201ENST00000307522 NFS1Q9Y697 457 aa17.65■□□□□ 0.42
CCDC8-201ENST00000307522 SMCO2A6NFE2 343 aa17.65■□□□□ 0.42
CCDC8-201ENST00000307522 CCNT1O60563 726 aaKnown RBP17.65■□□□□ 0.42
CCDC8-201ENST00000307522 DNAJC8O75937 253 aaPredicted RBP17.65■□□□□ 0.42
CCDC8-201ENST00000307522 ECHS1P30084 290 aa17.65■□□□□ 0.42
CCDC8-201ENST00000307522 CRKP46108 304 aa17.65■□□□□ 0.42
CCDC8-201ENST00000307522 ANKRD20A2Q5SQ80 823 aa17.65■□□□□ 0.42
CCDC8-201ENST00000307522 ANKRD20A1Q5TYW2 823 aa17.65■□□□□ 0.42
CCDC8-201ENST00000307522 ANKRD20A3Q5VUR7 823 aa17.65■□□□□ 0.42
CCDC8-201ENST00000307522 TRMT1LQ7Z2T5 733 aaKnown RBP17.65■□□□□ 0.42
CCDC8-201ENST00000307522 CACNA2D4Q7Z3S7 1137 aa17.65■□□□□ 0.42
CCDC8-201ENST00000307522 XPO6Q96QU8 1125 aaKnown RBP17.65■□□□□ 0.42
CCDC8-201ENST00000307522 ECM29Q5VYK3 1845 aa17.65■□□□□ 0.42
CCDC8-201ENST00000307522 HOXA10P31260 410 aaPredicted RBP17.64■□□□□ 0.42
CCDC8-201ENST00000307522 MIIPQ5JXC2 388 aa17.64■□□□□ 0.42
CCDC8-201ENST00000307522 TTI2Q6NXR4 508 aa17.64■□□□□ 0.42
CCDC8-201ENST00000307522 MASTLQ96GX5 879 aa17.64■□□□□ 0.42
CCDC8-201ENST00000307522 L3MBTL3Q96JM7 780 aaPredicted RBP17.64■□□□□ 0.42
CCDC8-201ENST00000307522 TRIM51Q9BSJ1 452 aa17.64■□□□□ 0.42
CCDC8-201ENST00000307522 SLC5A4Q9NY91 659 aa17.64■□□□□ 0.42
CCDC8-201ENST00000307522 CHD4Q14839 1912 aa17.64■□□□□ 0.42
CCDC8-201ENST00000307522 A0A1W2PQC6 194 aa17.64■□□□□ 0.41
CCDC8-201ENST00000307522 IFI35P80217 286 aaPredicted RBP17.64■□□□□ 0.41
CCDC8-201ENST00000307522 APOBEC3HQ6NTF7 200 aaKnown RBP17.64■□□□□ 0.41
CCDC8-201ENST00000307522 SLC30A9Q6PML9 568 aa17.64■□□□□ 0.41
CCDC8-201ENST00000307522 OTUD6AQ7L8S5 288 aa17.64■□□□□ 0.41
CCDC8-201ENST00000307522 SPIRE2Q8WWL2 714 aa17.64■□□□□ 0.41
CCDC8-201ENST00000307522 ECT2Q9H8V3 914 aa17.64■□□□□ 0.41
CCDC8-201ENST00000307522 DUOX1Q9NRD9 1551 aa17.64■□□□□ 0.41
CCDC8-201ENST00000307522 CALM1P0DP23 149 aa17.64■□□□□ 0.41
CCDC8-201ENST00000307522 CALM2P0DP24 149 aa17.64■□□□□ 0.41
CCDC8-201ENST00000307522 CALM3P0DP25 149 aa17.64■□□□□ 0.41
CCDC8-201ENST00000307522 ATP4AP20648 1035 aa17.64■□□□□ 0.41
CCDC8-201ENST00000307522 HSPA9P38646 679 aaKnown RBP17.64■□□□□ 0.41
CCDC8-201ENST00000307522 TNNI2P48788 182 aa17.64■□□□□ 0.41
CCDC8-201ENST00000307522 TEKT1Q969V4 418 aa17.64■□□□□ 0.41
CCDC8-201ENST00000307522 TSC22D3Q99576 134 aa17.64■□□□□ 0.41
CCDC8-201ENST00000307522 THSD7AQ9UPZ6 1657 aa17.63■□□□□ 0.41
CCDC8-201ENST00000307522 FGRP09769 529 aa17.63■□□□□ 0.41
CCDC8-201ENST00000307522 USH1GQ495M9 461 aa17.63■□□□□ 0.41
CCDC8-201ENST00000307522 LONP2Q86WA8 852 aa17.63■□□□□ 0.41
CCDC8-201ENST00000307522 MAGEC3Q8TD91 643 aa17.63■□□□□ 0.41
CCDC8-201ENST00000307522 WHAMMQ8TF30 809 aa17.63■□□□□ 0.41
CCDC8-201ENST00000307522 PLCB1Q9NQ66 1216 aa17.63■□□□□ 0.41
CCDC8-201ENST00000307522 RGS17Q9UGC6 210 aaPredicted RBP17.63■□□□□ 0.41
CCDC8-201ENST00000307522 SERPINB13Q9UIV8 391 aa17.63■□□□□ 0.41
CCDC8-201ENST00000307522 SCN7AQ01118 1682 aa17.63■□□□□ 0.41
CCDC8-201ENST00000307522 TTI1O43156 1089 aa17.63■□□□□ 0.41
CCDC8-201ENST00000307522 EEF1GP26641 437 aaKnown RBP17.63■□□□□ 0.41
CCDC8-201ENST00000307522 TECP42680 631 aa17.63■□□□□ 0.41
CCDC8-201ENST00000307522 TXKP42681 527 aa17.63■□□□□ 0.41
CCDC8-201ENST00000307522 PDE4DQ08499 809 aa17.63■□□□□ 0.41
CCDC8-201ENST00000307522 LACTB2Q53H82 288 aaPredicted RBP17.63■□□□□ 0.41
CCDC8-201ENST00000307522 RETREG2Q8NC44 543 aa17.63■□□□□ 0.41
CCDC8-201ENST00000307522 PAPOLBQ9NRJ5 636 aaKnown RBP17.63■□□□□ 0.41
CCDC8-201ENST00000307522 MYH7BA7E2Y1 1941 aa17.63■□□□□ 0.41
CCDC8-201ENST00000307522 POLE2P56282 527 aa17.62■□□□□ 0.41
CCDC8-201ENST00000307522 PPP4CP60510 307 aa17.62■□□□□ 0.41
CCDC8-201ENST00000307522 MXRA7P84157 204 aa17.62■□□□□ 0.41
CCDC8-201ENST00000307522 ANKS4BQ8N8V4 417 aa17.62■□□□□ 0.41
CCDC8-201ENST00000307522 PSMD1Q99460 953 aa17.62■□□□□ 0.41
CCDC8-201ENST00000307522 COA1Q9GZY4 146 aa17.62■□□□□ 0.41
CCDC8-201ENST00000307522 BRWD3Q6RI45 1802 aa17.62■□□□□ 0.41
CCDC8-201ENST00000307522 DOCK2Q92608 1830 aa17.62■□□□□ 0.41
CCDC8-201ENST00000307522 USP17L10C9JJH3 530 aa17.62■□□□□ 0.41
CCDC8-201ENST00000307522 ALDH1B1P30837 517 aa17.62■□□□□ 0.41
CCDC8-201ENST00000307522 C16orf86Q6ZW13 317 aa17.62■□□□□ 0.41
CCDC8-201ENST00000307522 TRPM8Q7Z2W7 1104 aa17.62■□□□□ 0.41
CCDC8-201ENST00000307522 CD302Q8IX05 232 aa17.62■□□□□ 0.41
CCDC8-201ENST00000307522 FERMT2Q96AC1 680 aa17.62■□□□□ 0.41
CCDC8-201ENST00000307522 KLHL29Q96CT2 875 aa17.62■□□□□ 0.41
CCDC8-201ENST00000307522 PRMT6Q96LA8 375 aaPredicted RBP17.62■□□□□ 0.41
CCDC8-201ENST00000307522 KDM4CQ9H3R0 1056 aa17.62■□□□□ 0.41
CCDC8-201ENST00000307522 ADAMTS1Q9UHI8 967 aa17.62■□□□□ 0.41
CCDC8-201ENST00000307522 PCDHA6Q9UN73 950 aa17.62■□□□□ 0.41
CCDC8-201ENST00000307522 PCDHA8Q9Y5H6 950 aa17.62■□□□□ 0.41
CCDC8-201ENST00000307522 NHSQ6T4R5 1651 aa17.62■□□□□ 0.41
CCDC8-201ENST00000307522 ASIC1P78348 528 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms