RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 PPFIBP2Q8ND30 876 aa4.99□□□□□ -1.61
VPS13C-201ENST00000249837 ZNF473Q8WTR7 871 aaKnown RBP4.99□□□□□ -1.61
VPS13C-201ENST00000249837 NACC1Q96RE7 527 aa4.99□□□□□ -1.61
VPS13C-201ENST00000249837 CNOT8Q9UFF9 292 aaKnown RBP4.99□□□□□ -1.61
VPS13C-201ENST00000249837 GGT7Q9UJ14 662 aa4.99□□□□□ -1.61
VPS13C-201ENST00000249837 PRRC2BQ5JSZ5 2229 aaKnown RBP4.99□□□□□ -1.61
VPS13C-201ENST00000249837 MYO1FO00160 1098 aa4.99□□□□□ -1.61
VPS13C-201ENST00000249837 ZBED4O75132 1171 aa4.99□□□□□ -1.61
VPS13C-201ENST00000249837 SGO2Q562F6 1265 aa4.99□□□□□ -1.61
VPS13C-201ENST00000249837 ADGRA1Q86SQ6 560 aa4.99□□□□□ -1.61
VPS13C-201ENST00000249837 LARGE2Q8N3Y3 721 aa4.99□□□□□ -1.61
VPS13C-201ENST00000249837 CD209Q9NNX6 404 aa4.99□□□□□ -1.61
VPS13C-201ENST00000249837 H0YIN7 160 aa4.99□□□□□ -1.61
VPS13C-201ENST00000249837 DRAP1Q14919 205 aaPredicted RBP4.99□□□□□ -1.61
VPS13C-201ENST00000249837 NAALADL2Q58DX5 795 aa4.99□□□□□ -1.61
VPS13C-201ENST00000249837 LMNTD2Q8IXW0 634 aa4.99□□□□□ -1.61
VPS13C-201ENST00000249837 CCDC110Q8TBZ0 833 aa4.99□□□□□ -1.61
VPS13C-201ENST00000249837 NT5C1BQ96P26 610 aa4.99□□□□□ -1.61
VPS13C-201ENST00000249837 ANO3Q9BYT9 981 aa4.99□□□□□ -1.61
VPS13C-201ENST00000249837 TMOD4Q9NZQ9 345 aa4.99□□□□□ -1.61
VPS13C-201ENST00000249837 KLHL14Q9P2G3 628 aa4.99□□□□□ -1.61
VPS13C-201ENST00000249837 ANAPC4Q9UJX5 808 aa4.99□□□□□ -1.61
VPS13C-201ENST00000249837 TXNDC9O14530 226 aa4.99□□□□□ -1.61
VPS13C-201ENST00000249837 PPIP5K2O43314 1243 aa4.99□□□□□ -1.61
VPS13C-201ENST00000249837 EIF2AK2P19525 551 aaKnown RBP4.99□□□□□ -1.61
VPS13C-201ENST00000249837 PDE6CP51160 858 aa4.99□□□□□ -1.61
VPS13C-201ENST00000249837 GJB7Q6PEY0 223 aa4.99□□□□□ -1.61
VPS13C-201ENST00000249837 DHX36Q9H2U1 1008 aaKnown RBP4.99□□□□□ -1.61
VPS13C-201ENST00000249837 CAPN6Q9Y6Q1 641 aa4.99□□□□□ -1.61
VPS13C-201ENST00000249837 PSMD1Q99460 953 aa4.99□□□□□ -1.61
VPS13C-201ENST00000249837 C1orf112Q9NSG2 853 aa4.99□□□□□ -1.61
VPS13C-201ENST00000249837 RAB21Q9UL25 225 aa4.99□□□□□ -1.61
VPS13C-201ENST00000249837 SART1O43290 800 aaKnown RBP4.99□□□□□ -1.61
VPS13C-201ENST00000249837 SARSP49591 514 aaKnown RBP4.99□□□□□ -1.61
VPS13C-201ENST00000249837 ARHGAP4P98171 946 aa4.99□□□□□ -1.61
VPS13C-201ENST00000249837 HOOK2Q96ED9 719 aa4.99□□□□□ -1.61
VPS13C-201ENST00000249837 SAAL1Q96ER3 474 aa4.99□□□□□ -1.61
VPS13C-201ENST00000249837 IWS1Q96ST2 819 aa4.99□□□□□ -1.61
VPS13C-201ENST00000249837 CCDC188H7C350 402 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 MYCNP04198 464 aaPredicted RBP4.98□□□□□ -1.61
VPS13C-201ENST00000249837 TAL1P17542 331 aaPredicted RBP4.98□□□□□ -1.61
VPS13C-201ENST00000249837 GRAPQ13588 217 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 PRKG1Q13976 671 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 SBK1Q52WX2 424 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 ADGRF4Q8IZF3 695 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 NKX2-3Q8TAU0 364 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 GRAPLQ8TC17 118 aaPredicted RBP4.98□□□□□ -1.61
VPS13C-201ENST00000249837 RNPC3Q96LT9 517 aaKnown RBP4.98□□□□□ -1.61
VPS13C-201ENST00000249837 PACSIN1Q9BY11 444 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 SAYSD1Q9NPB0 183 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.98□□□□□ -1.61
VPS13C-201ENST00000249837 PHF20L1A8MW92 1017 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 SLC8A1P32418 973 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 MXI1P50539 228 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 INTS5Q6P9B9 1019 aaKnown RBP4.98□□□□□ -1.61
VPS13C-201ENST00000249837 MAIP1Q8WWC4 291 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 MCUR1Q96AQ8 359 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 HAUS2Q9NVX0 235 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 TCP11X1B4DZS4 312 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 WNT7AO00755 349 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 PPP1R37O75864 691 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 PPP1R21Q6ZMI0 780 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 NLRX1Q86UT6 975 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 SMC6Q96SB8 1091 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 VIPAS39Q9H9C1 493 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 LARSQ9P2J5 1176 aaKnown RBP4.98□□□□□ -1.61
VPS13C-201ENST00000249837 GRID2IPA4D2P6 1211 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 COPB2P35606 906 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 NEDD9Q14511 834 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 KNOP1Q1ED39 458 aaKnown RBP4.98□□□□□ -1.61
VPS13C-201ENST00000249837 C6orf118Q5T5N4 469 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 CASC4Q6P4E1 433 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 APBB1IPQ7Z5R6 666 aaPredicted RBP4.98□□□□□ -1.61
VPS13C-201ENST00000249837 MDM1Q8TC05 714 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 RSAD2Q8WXG1 361 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 RUNDC3BQ96NL0 473 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 TPX2Q9ULW0 747 aaKnown RBP4.98□□□□□ -1.61
VPS13C-201ENST00000249837 PPEF1O14829 653 aaPredicted RBP4.98□□□□□ -1.61
VPS13C-201ENST00000249837 ECEL1O95672 775 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 SERPINB2P05120 415 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 PLS3P13797 630 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 GPC5P78333 572 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 CLEC4GQ6UXB4 293 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 C3orf67Q6ZVT6 689 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 PALM2Q8IXS6 379 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 RPUSD2Q8IZ73 545 aaKnown RBP4.98□□□□□ -1.61
VPS13C-201ENST00000249837 HEMGNQ9BXL5 484 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 ANKFY1Q9P2R3 1169 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 DBR1Q9UK59 544 aaKnown RBP4.98□□□□□ -1.61
VPS13C-201ENST00000249837 SLC37A4O43826 429 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 CCDC17Q96LX7 622 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 ZNF577Q9BSK1 485 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 INTUQ9ULD6 942 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 GINS2Q9Y248 185 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 MDM2Q00987 491 aaPredicted RBP4.98□□□□□ -1.61
VPS13C-201ENST00000249837 LRRC14Q15048 493 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 SLC18A3Q16572 532 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 WDR93Q6P2C0 686 aa4.98□□□□□ -1.61
VPS13C-201ENST00000249837 ACTR5Q9H9F9 607 aaPredicted RBP4.98□□□□□ -1.61
VPS13C-201ENST00000249837 PICK1Q9NRD5 415 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms