RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 DCLK2Q8N568 766 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 P2RX5Q93086 422 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 MMTAG2Q9BU76 263 aaKnown RBP10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 OSBPL3Q9H4L5 887 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 MAP3K20Q9NYL2 800 aaKnown RBP10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 DDX41Q9UJV9 622 aaKnown RBP10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 GDAQ9Y2T3 454 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 HYOU1Q9Y4L1 999 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 CCL15-CCL14A0A0B4J2E2 113 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 TXNP10599 105 aaKnown RBP10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 COG2Q14746 738 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 NAA25Q14CX7 972 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 CCL15Q16663 113 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 STAG1Q8WVM7 1258 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 STRBPQ96SI9 672 aaKnown RBP10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 MTRQ99707 1265 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 SAR1BQ9Y6B6 198 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 GOLGA8IPA6NC78 632 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 GOLGA8JA6NMD2 632 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 C19orf81C9J6K1 198 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 TFRCP02786 760 aaKnown RBP10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 PRELPP51888 382 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 MTMR2Q13614 643 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 SLC39A14Q15043 492 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 TMEM47Q9BQJ4 181 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 KATNAL1Q9BW62 490 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 LSG1Q9H089 658 aaKnown RBP10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 UBE2TQ9NPD8 197 aaPredicted RBP10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 PPP6R2O75170 966 aa10.56□□□□□ -0.72
CLTCL1-211ENST00000621271 KRT3P12035 628 aa10.56□□□□□ -0.72
CLTCL1-211ENST00000621271 ILDR1Q86SU0 546 aaPredicted RBP10.56□□□□□ -0.72
CLTCL1-211ENST00000621271 KCTD6Q8NC69 237 aa10.56□□□□□ -0.72
CLTCL1-211ENST00000621271 AFG1LQ8WV93 481 aa10.56□□□□□ -0.72
CLTCL1-211ENST00000621271 KIAA1586Q9HCI6 787 aa10.56□□□□□ -0.72
CLTCL1-211ENST00000621271 ABCF3Q9NUQ8 709 aa10.56□□□□□ -0.72
CLTCL1-211ENST00000621271 STRIP2Q9ULQ0 834 aa10.56□□□□□ -0.72
CLTCL1-211ENST00000621271 PPP2R2CQ9Y2T4 447 aa10.56□□□□□ -0.72
CLTCL1-211ENST00000621271 SYNMO15061 1565 aa10.56□□□□□ -0.72
CLTCL1-211ENST00000621271 PPFIA4O75335 1185 aa10.56□□□□□ -0.72
CLTCL1-211ENST00000621271 SEPT6Q14141 434 aa10.56□□□□□ -0.72
CLTCL1-211ENST00000621271 SLC15A2Q16348 729 aa10.56□□□□□ -0.72
CLTCL1-211ENST00000621271 JADE1Q6IE81 842 aa10.56□□□□□ -0.72
CLTCL1-211ENST00000621271 TTC30BQ8N4P2 665 aa10.56□□□□□ -0.72
CLTCL1-211ENST00000621271 TRAPPC3O43617 180 aa10.56□□□□□ -0.72
CLTCL1-211ENST00000621271 KRT1P04264 644 aa10.56□□□□□ -0.72
CLTCL1-211ENST00000621271 SWSAP1Q6NVH7 229 aa10.56□□□□□ -0.72
CLTCL1-211ENST00000621271 ADAT2Q7Z6V5 191 aaKnown RBP10.56□□□□□ -0.72
CLTCL1-211ENST00000621271 VCXQ9H320 206 aa10.56□□□□□ -0.72
CLTCL1-211ENST00000621271 SH3GLB2Q9NR46 395 aa10.56□□□□□ -0.72
CLTCL1-211ENST00000621271 GCNT4Q9P109 453 aa10.56□□□□□ -0.72
CLTCL1-211ENST00000621271 BCAP29Q9UHQ4 241 aa10.56□□□□□ -0.72
CLTCL1-211ENST00000621271 PASKQ96RG2 1323 aa10.56□□□□□ -0.72
CLTCL1-211ENST00000621271 RGS16O15492 202 aaPredicted RBP10.56□□□□□ -0.72
CLTCL1-211ENST00000621271 TROVE2P10155 538 aaKnown RBP eCLIP10.56□□□□□ -0.72
CLTCL1-211ENST00000621271 PMLP29590 882 aa10.56□□□□□ -0.72
CLTCL1-211ENST00000621271 SCARF1Q14162 830 aa10.56□□□□□ -0.72
CLTCL1-211ENST00000621271 NRBP1Q9UHY1 535 aa10.56□□□□□ -0.72
CLTCL1-211ENST00000621271 PPME1Q9Y570 386 aa10.56□□□□□ -0.72
CLTCL1-211ENST00000621271 GPC4O75487 556 aa10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 RARBP10826 455 aa10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 DPEP1P16444 411 aa10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 HOXA7P31268 230 aaPredicted RBP10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 STX2P32856 288 aa10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 NR5A1Q13285 461 aa10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 TBC1D16Q8TBP0 767 aa10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 HGSO14964 777 aaPredicted RBP10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 EEF1GP26641 437 aaKnown RBP10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 GMPSP49915 693 aaPredicted RBP10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 MAN2A1Q16706 1144 aa10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 BANK1Q8NDB2 785 aa10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 CEP95Q96GE4 821 aa10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 GABBR1Q9UBS5 961 aa10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 CPDO75976 1380 aa10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 HMGB1P1B2RPK0 211 aaPredicted RBP10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 SNAP23O00161 211 aa10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 DYNC1LI2O43237 492 aaPredicted RBP10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 SOX5P35711 763 aa10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 NDUFA8P51970 172 aa10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 COPB1P53618 953 aaKnown RBP10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 PRR5LQ6MZQ0 368 aa10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 NEK9Q8TD19 979 aa10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 PIGOQ8TEQ8 1089 aa10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 RUNDC3BQ96NL0 473 aa10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 VCX3BQ9H321 246 aa10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 PLEKHA4Q9H4M7 779 aa10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 MED4Q9NPJ6 270 aa10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 IQGAP3Q86VI3 1631 aa10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 SPATA31D1Q6ZQQ2 1576 aa10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 CPP00450 1065 aa10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 RPS12P25398 132 aaKnown RBP10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 PPP1R18Q6NYC8 613 aa10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 PADI6Q6TGC4 694 aa10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 BZW1Q7L1Q6 419 aaKnown RBP10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 ERICH1Q86X53 443 aa10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 CCDC13Q8IYE1 715 aa10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 ANKRD42Q8N9B4 389 aa10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 ARHGEF2Q92974 986 aaKnown RBP10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 TEX13BQ9BXU2 312 aa10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 DYRK4Q9NR20 520 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms