RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 GRK7Q8WTQ7 553 aa8.9□□□□□ -0.99
PRKAB1-207ENST00000542698 FAM20AQ96MK3 541 aa8.9□□□□□ -0.99
PRKAB1-207ENST00000542698 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.9□□□□□ -0.99
PRKAB1-207ENST00000542698 AMACRQ9UHK6 382 aa8.9□□□□□ -0.99
PRKAB1-207ENST00000542698 HOXA13P31271 388 aaPredicted RBP8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 PCK1P35558 622 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 MFAP3P55082 362 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 MAGOHP61326 146 aaKnown RBP8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 CTTNQ14247 550 aaKnown RBP8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 FYB2Q5VWT5 728 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 RHOT2Q8IXI1 618 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 SMC6Q96SB8 1091 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 MAP2K7O14733 419 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 PRLRP16471 622 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 KLRC1P26715 233 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 PMS1P54277 932 aaKnown RBP8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 E2F5Q15329 346 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 C6orf118Q5T5N4 469 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 PPP1R18Q6NYC8 613 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 DPH6Q7L8W6 267 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 ZNF653Q96CK0 615 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 VPS37BQ9H9H4 285 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 MTMR4Q9NYA4 1195 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 CAPN6Q9Y6Q1 641 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 H0YIN7 160 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 GDF11O95390 407 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 RASSF2P50749 326 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 USP11P51784 963 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 HERVK_113P62684 666 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 DLGAP5Q15398 846 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 AOC3Q16853 763 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 CENPPQ6IPU0 288 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 OTUD6AQ7L8S5 288 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 NLRX1Q86UT6 975 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 NLRP14Q86W24 1093 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 CCDC13Q8IYE1 715 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 TBC1D31Q96DN5 1066 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 NT5C1BQ96P26 610 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 FERMT1Q9BQL6 677 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 COA1Q9GZY4 146 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 C1orf112Q9NSG2 853 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 USP21Q9UK80 565 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 DIS3Q9Y2L1 958 aaKnown RBP8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 CD2APQ9Y5K6 639 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 PODXLO00592 558 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 CHUKO15111 745 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 MEFVO15553 781 aaPredicted RBP8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 DAPK3O43293 454 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 ECEL1O95672 775 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 AKR1B1P15121 316 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 ATF2P15336 505 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 PTK2Q05397 1052 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 QRICH1Q2TAL8 776 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 SGO2Q562F6 1265 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 SYDE2Q5VT97 1194 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 LRRC31Q6UY01 552 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 SMIM5Q71RC9 77 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 FRMD5Q7Z6J6 570 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 PPFIBP2Q8ND30 876 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 ZIM3Q96PE6 472 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 TACO1Q9BSH4 297 aaKnown RBP8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 MAK16Q9BXY0 300 aaKnown RBP8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 TMEM206Q9H813 350 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 MAD2L2Q9UI95 211 aa8.89□□□□□ -0.99
PRKAB1-207ENST00000542698 PEAK1Q9H792 1746 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 HIP1RO75146 1068 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 ALAS1P13196 640 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 MXI1P50539 228 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 CORO7P57737 925 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 SNAP25P60880 206 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 PPP2R2AP63151 447 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 CDK17Q00537 523 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 SNX1Q13596 522 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 GLYCTKQ8IVS8 523 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 DAGLBQ8NCG7 672 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 ANKS1AQ92625 1134 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 ARHGEF1Q92888 912 aaKnown RBP8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 PSMD1Q99460 953 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 DNAI2Q9GZS0 605 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 SLITRK6Q9H5Y7 841 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 FBXL5Q9UKA1 691 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 ODF2LQ9ULJ1 636 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 ZNF148Q9UQR1 794 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 FAM205AQ6ZU69 1335 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 A0A0U1RQJ8 604 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 PALM3A6NDB9 673 aaPredicted RBP8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 MIF4GDA9UHW6 222 aaKnown RBP8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 PPEF1O14829 653 aaPredicted RBP8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 UCHL3P15374 230 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 MAPK4P31152 587 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 STAT3P40763 770 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 MDH1P40925 334 aaKnown RBP8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 NSFP46459 744 aaKnown RBP8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 ZNF131P52739 623 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 ITPK1Q13572 414 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 DRAP1Q14919 205 aaPredicted RBP8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 TTBK2Q6IQ55 1244 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms