RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 CCDC196A0A1B0GTZ2 297 aa8.58□□□□□ -1.04
GNE-205ENST00000539815 SEC24BO95487 1268 aa8.58□□□□□ -1.04
GNE-205ENST00000539815 SSBP05455 408 aaKnown RBP eCLIP8.58□□□□□ -1.04
GNE-205ENST00000539815 XBP1P17861 261 aa8.58□□□□□ -1.04
GNE-205ENST00000539815 CD52P31358 61 aa8.58□□□□□ -1.04
GNE-205ENST00000539815 PPFIBP1Q86W92 1011 aa8.58□□□□□ -1.04
GNE-205ENST00000539815 CALR3Q96L12 384 aaKnown RBP8.58□□□□□ -1.04
GNE-205ENST00000539815 TCF25Q9BQ70 676 aa8.58□□□□□ -1.04
GNE-205ENST00000539815 SLITRK6Q9H5Y7 841 aa8.58□□□□□ -1.04
GNE-205ENST00000539815 PXMP2Q9NR77 195 aa8.58□□□□□ -1.04
GNE-205ENST00000539815 CDV3Q9UKY7 258 aaKnown RBP8.58□□□□□ -1.04
GNE-205ENST00000539815 TCF7P36402 384 aaPredicted RBP8.58□□□□□ -1.04
GNE-205ENST00000539815 TBC1D8BQ0IIM8 1120 aa8.58□□□□□ -1.04
GNE-205ENST00000539815 GRIK4Q16099 956 aa8.58□□□□□ -1.04
GNE-205ENST00000539815 DNAJC21Q5F1R6 531 aaKnown RBP8.58□□□□□ -1.04
GNE-205ENST00000539815 XRRA1Q6P2D8 792 aa8.58□□□□□ -1.04
GNE-205ENST00000539815 UBALD2Q8IYN6 164 aa8.58□□□□□ -1.04
GNE-205ENST00000539815 RTP3Q9BQQ7 232 aa8.58□□□□□ -1.04
GNE-205ENST00000539815 BACH2Q9BYV9 841 aa8.58□□□□□ -1.04
GNE-205ENST00000539815 BARX2Q9UMQ3 279 aaPredicted RBP8.58□□□□□ -1.04
GNE-205ENST00000539815 ASXL3Q9C0F0 2248 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 PI4K2BG5E9Z4 385 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 KINO60870 393 aaKnown RBP8.57□□□□□ -1.04
GNE-205ENST00000539815 ZC3H11AO75152 810 aaKnown RBP eCLIP8.57□□□□□ -1.04
GNE-205ENST00000539815 FOSP01100 380 aaPredicted RBP8.57□□□□□ -1.04
GNE-205ENST00000539815 METAP2P50579 478 aaKnown RBP eCLIP8.57□□□□□ -1.04
GNE-205ENST00000539815 EVX2Q03828 476 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 NMIQ13287 307 aaPredicted RBP8.57□□□□□ -1.04
GNE-205ENST00000539815 CBX2Q14781 532 aaPredicted RBP8.57□□□□□ -1.04
GNE-205ENST00000539815 NAALADL2Q58DX5 795 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 KLHL23Q8NBE8 558 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 TTC16Q8NEE8 873 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 EDAQ92838 391 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 TOP1MTQ969P6 601 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 PGBD4Q96DM1 585 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 MRPS17Q9Y2R5 130 aaKnown RBP8.57□□□□□ -1.04
GNE-205ENST00000539815 POTEB3A0JP26 581 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 GRM6O15303 877 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 AVPR2P30518 371 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 RRP1P56182 461 aaKnown RBP8.57□□□□□ -1.04
GNE-205ENST00000539815 MRPS6P82932 125 aaKnown RBP8.57□□□□□ -1.04
GNE-205ENST00000539815 SATB1Q01826 763 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 POTEBQ6S5H4 581 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 HFE2Q6ZVN8 426 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 SIAH1Q8IUQ4 282 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 TRIM22Q8IYM9 498 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 REPS2Q8NFH8 660 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 FAM167AQ96KS9 214 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 PIGSQ96S52 555 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 TMX1Q9H3N1 280 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 SSX2IPQ9Y2D8 614 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 USP15Q9Y4E8 981 aaPredicted RBP8.57□□□□□ -1.04
GNE-205ENST00000539815 CEP83Q9Y592 693 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 PNMA6FA0A0J9YX94 578 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 MBTPS2O43462 519 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 LAMTOR5O43504 91 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 ERLIN2O94905 339 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 SKIP12755 728 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 FOXD4L6Q3SYB3 417 aaPredicted RBP8.57□□□□□ -1.04
GNE-205ENST00000539815 FOXD4L3Q6VB84 417 aaPredicted RBP8.57□□□□□ -1.04
GNE-205ENST00000539815 CEP68Q76N32 757 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 YAF2Q8IY57 180 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 CEP120Q8N960 986 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 KREMEN2Q8NCW0 462 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 SORCS3Q9UPU3 1222 aa8.57□□□□□ -1.04
GNE-205ENST00000539815 TCRBV5S4A2TA0A5A2 114 aa8.56□□□□□ -1.04
GNE-205ENST00000539815 LIG1P18858 919 aa8.56□□□□□ -1.04
GNE-205ENST00000539815 MICU3Q86XE3 530 aa8.56□□□□□ -1.04
GNE-205ENST00000539815 TRIM50Q86XT4 487 aa8.56□□□□□ -1.04
GNE-205ENST00000539815 GCOM2Q9BZD3 368 aaPredicted RBP8.56□□□□□ -1.04
GNE-205ENST00000539815 ANO2Q9NQ90 1003 aa8.56□□□□□ -1.04
GNE-205ENST00000539815 SLC9A2Q9UBY0 812 aa8.56□□□□□ -1.04
GNE-205ENST00000539815 CIZ1Q9ULV3 898 aaPredicted RBP8.56□□□□□ -1.04
GNE-205ENST00000539815 STK24Q9Y6E0 443 aa8.56□□□□□ -1.04
GNE-205ENST00000539815 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.56□□□□□ -1.04
GNE-205ENST00000539815 C2CD2LO14523 706 aa8.56□□□□□ -1.04
GNE-205ENST00000539815 MAFGO15525 162 aa8.56□□□□□ -1.04
GNE-205ENST00000539815 HBP1O60381 514 aa8.56□□□□□ -1.04
GNE-205ENST00000539815 PTGS1P23219 599 aa8.56□□□□□ -1.04
GNE-205ENST00000539815 SMC1AQ14683 1233 aaKnown RBP8.56□□□□□ -1.04
GNE-205ENST00000539815 CCSAPQ6IQ19 270 aaPredicted RBP8.56□□□□□ -1.04
GNE-205ENST00000539815 TSHZ1Q6ZSZ6 1077 aa8.56□□□□□ -1.04
GNE-205ENST00000539815 APBB1IPQ7Z5R6 666 aaPredicted RBP8.56□□□□□ -1.04
GNE-205ENST00000539815 PLA2G4DQ86XP0 818 aa8.56□□□□□ -1.04
GNE-205ENST00000539815 BCO2Q9BYV7 579 aa8.56□□□□□ -1.04
GNE-205ENST00000539815 JPH1Q9HDC5 661 aaPredicted RBP8.56□□□□□ -1.04
GNE-205ENST00000539815 PSME4Q14997 1843 aa8.56□□□□□ -1.04
GNE-205ENST00000539815 TTC36A6NLP5 189 aa8.56□□□□□ -1.04
GNE-205ENST00000539815 F2P00734 622 aa8.56□□□□□ -1.04
GNE-205ENST00000539815 UBA1P22314 1058 aaKnown RBP8.56□□□□□ -1.04
GNE-205ENST00000539815 UBXN2BQ14CS0 331 aa8.56□□□□□ -1.04
GNE-205ENST00000539815 TMEM266Q2M3C6 531 aa8.56□□□□□ -1.04
GNE-205ENST00000539815 RASIP1Q5U651 963 aa8.56□□□□□ -1.04
GNE-205ENST00000539815 MYSM1Q5VVJ2 828 aa8.56□□□□□ -1.04
GNE-205ENST00000539815 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.56□□□□□ -1.04
GNE-205ENST00000539815 DCTPP1Q9H773 170 aa8.56□□□□□ -1.04
GNE-205ENST00000539815 CYP26B1Q9NR63 512 aa8.56□□□□□ -1.04
GNE-205ENST00000539815 ZBTB40Q9NUA8 1239 aa8.56□□□□□ -1.04
GNE-205ENST00000539815 LIMD1Q9UGP4 676 aa8.56□□□□□ -1.04
GNE-205ENST00000539815 MAGEB2O15479 319 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms