RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 CCDC174Q6PII3 467 aa20.16■□□□□ 0.82
SDC2-202ENST00000518385 KIAA1328Q86T90 577 aa20.16■□□□□ 0.82
SDC2-202ENST00000518385 MMGT1Q8N4V1 131 aa20.16■□□□□ 0.82
SDC2-202ENST00000518385 IPO4Q8TEX9 1081 aaKnown RBP20.16■□□□□ 0.82
SDC2-202ENST00000518385 NUDT12Q9BQG2 462 aa20.16■□□□□ 0.82
SDC2-202ENST00000518385 FAM204AQ9H8W3 233 aa20.16■□□□□ 0.82
SDC2-202ENST00000518385 FGFR1OPO95684 399 aaKnown RBP20.15■□□□□ 0.82
SDC2-202ENST00000518385 CFBP00751 764 aa20.15■□□□□ 0.82
SDC2-202ENST00000518385 FKBP1BP68106 108 aa20.15■□□□□ 0.82
SDC2-202ENST00000518385 SPIRE1Q08AE8 756 aa20.15■□□□□ 0.82
SDC2-202ENST00000518385 DNAJC21Q5F1R6 531 aaKnown RBP20.15■□□□□ 0.82
SDC2-202ENST00000518385 CCDC122Q5T0U0 273 aa20.15■□□□□ 0.82
SDC2-202ENST00000518385 SAMD1Q6SPF0 538 aaPredicted RBP20.15■□□□□ 0.82
SDC2-202ENST00000518385 CATSPERGQ6ZRH7 1159 aa20.15■□□□□ 0.82
SDC2-202ENST00000518385 GUF1Q8N442 669 aaKnown RBP20.15■□□□□ 0.82
SDC2-202ENST00000518385 NOA1Q8NC60 698 aaKnown RBP20.15■□□□□ 0.82
SDC2-202ENST00000518385 JAKMIP2Q96AA8 810 aa20.15■□□□□ 0.82
SDC2-202ENST00000518385 SLC38A10Q9HBR0 1119 aa20.15■□□□□ 0.82
SDC2-202ENST00000518385 REXO2Q9Y3B8 237 aaKnown RBP20.15■□□□□ 0.82
SDC2-202ENST00000518385 LRRIQ3A6PVS8 624 aaPredicted RBP20.14■□□□□ 0.81
SDC2-202ENST00000518385 GOLGA8KD6RF30 607 aa20.14■□□□□ 0.81
SDC2-202ENST00000518385 FAM86B1E9PN63 330 aa20.14■□□□□ 0.81
SDC2-202ENST00000518385 IRF6O14896 467 aa20.14■□□□□ 0.81
SDC2-202ENST00000518385 OPA1O60313 960 aa20.14■□□□□ 0.81
SDC2-202ENST00000518385 USO1O60763 962 aaKnown RBP20.14■□□□□ 0.81
SDC2-202ENST00000518385 FAM86B2P0C5J1 330 aa20.14■□□□□ 0.81
SDC2-202ENST00000518385 MUTP22033 750 aa20.14■□□□□ 0.81
SDC2-202ENST00000518385 RPA1P27694 616 aa20.14■□□□□ 0.81
SDC2-202ENST00000518385 TNFRSF8P28908 595 aa20.14■□□□□ 0.81
SDC2-202ENST00000518385 HOXA13P31271 388 aaPredicted RBP20.14■□□□□ 0.81
SDC2-202ENST00000518385 EHHADHQ08426 723 aa20.14■□□□□ 0.81
SDC2-202ENST00000518385 PPIL2Q13356 520 aa20.14■□□□□ 0.81
SDC2-202ENST00000518385 TRIM58Q8NG06 486 aa20.14■□□□□ 0.81
SDC2-202ENST00000518385 ZNF526Q8TF50 670 aaPredicted RBP20.14■□□□□ 0.81
SDC2-202ENST00000518385 DDX12PQ92771 950 aa20.14■□□□□ 0.81
SDC2-202ENST00000518385 OTUD5Q96G74 571 aa20.14■□□□□ 0.81
SDC2-202ENST00000518385 TRIM47Q96LD4 638 aa20.14■□□□□ 0.81
SDC2-202ENST00000518385 POLR3CQ9BUI4 534 aaPredicted RBP20.14■□□□□ 0.81
SDC2-202ENST00000518385 ZNF408Q9H9D4 720 aa20.14■□□□□ 0.81
SDC2-202ENST00000518385 FAM184BQ9ULE4 1060 aa20.14■□□□□ 0.81
SDC2-202ENST00000518385 GUCA1BQ9UMX6 200 aa20.14■□□□□ 0.81
SDC2-202ENST00000518385 KCNH4Q9UQ05 1017 aa20.14■□□□□ 0.81
SDC2-202ENST00000518385 ZNF536O15090 1300 aa20.14■□□□□ 0.81
SDC2-202ENST00000518385 TTC26A0AVF1 554 aa20.13■□□□□ 0.81
SDC2-202ENST00000518385 MSH4O15457 936 aa20.13■□□□□ 0.81
SDC2-202ENST00000518385 HNRNPH3P31942 346 aaKnown RBP20.13■□□□□ 0.81
SDC2-202ENST00000518385 DSG3P32926 999 aa20.13■□□□□ 0.81
SDC2-202ENST00000518385 HSD17B4P51659 736 aa20.13■□□□□ 0.81
SDC2-202ENST00000518385 SETQ01105 290 aaPredicted RBP20.13■□□□□ 0.81
SDC2-202ENST00000518385 APBA1Q02410 837 aa20.13■□□□□ 0.81
SDC2-202ENST00000518385 STK4Q13043 487 aa20.13■□□□□ 0.81
SDC2-202ENST00000518385 NNTQ13423 1086 aa20.13■□□□□ 0.81
SDC2-202ENST00000518385 COG2Q14746 738 aa20.13■□□□□ 0.81
SDC2-202ENST00000518385 CENPPQ6IPU0 288 aa20.13■□□□□ 0.81
SDC2-202ENST00000518385 LRRC31Q6UY01 552 aa20.13■□□□□ 0.81
SDC2-202ENST00000518385 C10orf67Q8IYJ2 551 aa20.13■□□□□ 0.81
SDC2-202ENST00000518385 RNF14Q9UBS8 474 aa20.13■□□□□ 0.81
SDC2-202ENST00000518385 ADAMTS5Q9UNA0 930 aa20.13■□□□□ 0.81
SDC2-202ENST00000518385 KIAA1024Q9UPX6 916 aa20.13■□□□□ 0.81
SDC2-202ENST00000518385 ATXN2Q99700 1313 aaKnown RBP20.13■□□□□ 0.81
SDC2-202ENST00000518385 IGLV3-22A0A075B6J6 115 aa20.12■□□□□ 0.81
SDC2-202ENST00000518385 A0A0G2JLL6 359 aaPredicted RBP20.12■□□□□ 0.81
SDC2-202ENST00000518385 ZBED4O75132 1171 aa20.12■□□□□ 0.81
SDC2-202ENST00000518385 SYF2O95926 243 aaKnown RBP20.12■□□□□ 0.81
SDC2-202ENST00000518385 TTC31Q49AM3 519 aaPredicted RBP20.12■□□□□ 0.81
SDC2-202ENST00000518385 CCNI2Q6ZMN8 369 aaPredicted RBP20.12■□□□□ 0.81
SDC2-202ENST00000518385 PRRT2Q7Z6L0 340 aaPredicted RBP20.12■□□□□ 0.81
SDC2-202ENST00000518385 SPATS2Q86XZ4 545 aaKnown RBP20.12■□□□□ 0.81
SDC2-202ENST00000518385 CCDC65Q8IXS2 484 aa20.12■□□□□ 0.81
SDC2-202ENST00000518385 FAM76AQ8TAV0 307 aa20.12■□□□□ 0.81
SDC2-202ENST00000518385 SLC10A4Q96EP9 437 aa20.12■□□□□ 0.81
SDC2-202ENST00000518385 ERGIC2Q96RQ1 377 aa20.12■□□□□ 0.81
SDC2-202ENST00000518385 EDEM3Q9BZQ6 932 aa20.12■□□□□ 0.81
SDC2-202ENST00000518385 MAF1Q9H063 256 aa20.12■□□□□ 0.81
SDC2-202ENST00000518385 RSPH14Q9UHP6 348 aa20.12■□□□□ 0.81
SDC2-202ENST00000518385 TSKSQ9UJT2 592 aa20.12■□□□□ 0.81
SDC2-202ENST00000518385 CCPG1Q9ULG6 757 aa20.12■□□□□ 0.81
SDC2-202ENST00000518385 MAPK8IP1Q9UQF2 711 aa20.12■□□□□ 0.81
SDC2-202ENST00000518385 JRKLQ9Y4A0 524 aa20.12■□□□□ 0.81
SDC2-202ENST00000518385 SMCHD1A6NHR9 2005 aa20.12■□□□□ 0.81
SDC2-202ENST00000518385 PTPRFP10586 1907 aa20.12■□□□□ 0.81
SDC2-202ENST00000518385 A0A087WUV0 522 aaPredicted RBP20.12■□□□□ 0.81
SDC2-202ENST00000518385 VWA5AO00534 786 aa20.12■□□□□ 0.81
SDC2-202ENST00000518385 PLA2G4BP0C869 781 aa20.12■□□□□ 0.81
SDC2-202ENST00000518385 VAV2P52735 878 aa20.12■□□□□ 0.81
SDC2-202ENST00000518385 GYS2P54840 703 aa20.12■□□□□ 0.81
SDC2-202ENST00000518385 HERVK_113P62684 666 aa20.12■□□□□ 0.81
SDC2-202ENST00000518385 LRRC63Q05C16 580 aa20.12■□□□□ 0.81
SDC2-202ENST00000518385 KIF5AQ12840 1032 aa20.12■□□□□ 0.81
SDC2-202ENST00000518385 ECM1Q16610 540 aa20.12■□□□□ 0.81
SDC2-202ENST00000518385 GLE1Q53GS7 698 aaKnown RBP20.12■□□□□ 0.81
SDC2-202ENST00000518385 ALS2CLQ60I27 953 aa20.12■□□□□ 0.81
SDC2-202ENST00000518385 NIPA1Q7RTP0 329 aa20.12■□□□□ 0.81
SDC2-202ENST00000518385 KCNK18Q7Z418 384 aa20.12■□□□□ 0.81
SDC2-202ENST00000518385 CSGALNACT2Q8N6G5 542 aa20.12■□□□□ 0.81
SDC2-202ENST00000518385 PROCA1Q8NCQ7 364 aaPredicted RBP20.12■□□□□ 0.81
SDC2-202ENST00000518385 OPTNQ96CV9 577 aa20.12■□□□□ 0.81
SDC2-202ENST00000518385 DNAJC19Q96DA6 116 aa20.12■□□□□ 0.81
SDC2-202ENST00000518385 AGBL1Q96MI9 1066 aa20.12■□□□□ 0.81
SDC2-202ENST00000518385 TTYH3Q9C0H2 523 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms