RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 LSMEM2Q8N112 164 aa7.87□□□□□ -1.15
NIPBL-208ENST00000514335 LRRC47Q8N1G4 583 aaKnown RBP7.87□□□□□ -1.15
NIPBL-208ENST00000514335 OSBP2Q969R2 916 aa7.87□□□□□ -1.15
NIPBL-208ENST00000514335 PRPF18Q99633 342 aaKnown RBP7.87□□□□□ -1.15
NIPBL-208ENST00000514335 EIF2AQ9BY44 585 aaKnown RBP7.87□□□□□ -1.15
NIPBL-208ENST00000514335 WNT5BQ9H1J7 359 aa7.87□□□□□ -1.15
NIPBL-208ENST00000514335 C12orf49Q9H741 205 aa7.87□□□□□ -1.15
NIPBL-208ENST00000514335 RNF19AQ9NV58 838 aa7.87□□□□□ -1.15
NIPBL-208ENST00000514335 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.87□□□□□ -1.15
NIPBL-208ENST00000514335 ZNF69Q9UC07 566 aa7.87□□□□□ -1.15
NIPBL-208ENST00000514335 FAM184BQ9ULE4 1060 aa7.87□□□□□ -1.15
NIPBL-208ENST00000514335 ZBTB43O43298 467 aa7.87□□□□□ -1.15
NIPBL-208ENST00000514335 TGDSO95455 350 aa7.87□□□□□ -1.15
NIPBL-208ENST00000514335 GSTT2P0CG29 244 aa7.87□□□□□ -1.15
NIPBL-208ENST00000514335 GSTT2BP0CG30 244 aa7.87□□□□□ -1.15
NIPBL-208ENST00000514335 CLDN10P78369 228 aa7.87□□□□□ -1.15
NIPBL-208ENST00000514335 KLC1Q07866 573 aa7.87□□□□□ -1.15
NIPBL-208ENST00000514335 AIMP1Q12904 312 aaKnown RBP7.87□□□□□ -1.15
NIPBL-208ENST00000514335 EGLN2Q96KS0 407 aa7.87□□□□□ -1.15
NIPBL-208ENST00000514335 TESK2Q96S53 571 aa7.87□□□□□ -1.15
NIPBL-208ENST00000514335 FAM107BQ9H098 131 aa7.87□□□□□ -1.15
NIPBL-208ENST00000514335 TPK1Q9H3S4 243 aa7.87□□□□□ -1.15
NIPBL-208ENST00000514335 MALT1Q9UDY8 824 aa7.87□□□□□ -1.15
NIPBL-208ENST00000514335 CORO1CQ9ULV4 474 aaPredicted RBP7.87□□□□□ -1.15
NIPBL-208ENST00000514335 ZBTB1Q9Y2K1 713 aa7.87□□□□□ -1.15
NIPBL-208ENST00000514335 ZNF644Q9H582 1327 aaPredicted RBP7.86□□□□□ -1.15
NIPBL-208ENST00000514335 TRIM75PA6NK02 468 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 IGF2BP3O00425 579 aaKnown RBP eCLIP7.86□□□□□ -1.15
NIPBL-208ENST00000514335 EXTL3O43909 919 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 ADCY5O95622 1261 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 LINGO3P0C6S8 592 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 MYBL1P10243 752 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 PRKAR2AP13861 404 aaKnown RBP7.86□□□□□ -1.15
NIPBL-208ENST00000514335 ZNF3P17036 446 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 NOS2P35228 1153 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 EPS15P42566 896 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 ELF2Q15723 593 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 TUBB8Q3ZCM7 444 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 ARHGAP11AQ6P4F7 1023 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 IFNL2Q8IZJ0 200 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 SPARTQ8N0X7 666 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 IRGQQ8WZA9 623 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 C19orf43Q9BQ61 176 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 HOMER2Q9NSB8 354 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 GGA3Q9NZ52 723 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 DDX19BQ9UMR2 479 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 PCDHB2Q9Y5E7 798 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 HEY1Q9Y5J3 304 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 GOLGA6L9A6NEM1 432 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 VWA5AO00534 786 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 E2F3O00716 465 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 HAT1O14929 419 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 OR5F1O95221 314 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 C6orf222P0C671 652 aaPredicted RBP7.86□□□□□ -1.15
NIPBL-208ENST00000514335 CPA1P15085 419 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 ITGB3BPQ13352 177 aaPredicted RBP7.86□□□□□ -1.15
NIPBL-208ENST00000514335 PPA1Q15181 289 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 BCL2A1Q16548 175 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 CEP128Q6ZU80 1094 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 ZNF565Q8N9K5 539 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 TRPC4APQ8TEL6 797 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 NRBF2Q96F24 287 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 GJD4Q96KN9 370 aaPredicted RBP7.86□□□□□ -1.15
NIPBL-208ENST00000514335 FAM167AQ96KS9 214 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 PUS3Q9BZE2 481 aaKnown RBP7.86□□□□□ -1.15
NIPBL-208ENST00000514335 EHMT1Q9H9B1 1298 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 ZNF624Q9P2J8 865 aaPredicted RBP7.86□□□□□ -1.15
NIPBL-208ENST00000514335 ATXN10Q9UBB4 475 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 RNF112Q9ULX5 631 aa7.86□□□□□ -1.15
NIPBL-208ENST00000514335 ARHGAP10A1A4S6 786 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 ACTN4O43707 911 aaKnown RBP7.85□□□□□ -1.15
NIPBL-208ENST00000514335 PFDN1O60925 122 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 DDHD2O94830 711 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 ZKSCAN1P17029 563 aaPredicted RBP7.85□□□□□ -1.15
NIPBL-208ENST00000514335 VARSP26640 1264 aaKnown RBP7.85□□□□□ -1.15
NIPBL-208ENST00000514335 ZNF76P36508 570 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 MLLT3P42568 568 aaPredicted RBP7.85□□□□□ -1.15
NIPBL-208ENST00000514335 PLCD1P51178 756 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 TPD52P55327 224 aaPredicted RBP7.85□□□□□ -1.15
NIPBL-208ENST00000514335 TAF12Q16514 161 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 BZW1Q7L1Q6 419 aaKnown RBP7.85□□□□□ -1.15
NIPBL-208ENST00000514335 CAND1Q86VP6 1230 aaKnown RBP7.85□□□□□ -1.15
NIPBL-208ENST00000514335 TOR1AIP2Q8NFQ8 470 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 TTC8Q8TAM2 541 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 CCDC127Q96BQ5 260 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 RPGRIP1Q96KN7 1286 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 CGREF1Q99674 301 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 CEP44Q9C0F1 390 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 CYP4F11Q9HBI6 524 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 ALG13Q9NP73 1137 aaKnown RBP7.85□□□□□ -1.15
NIPBL-208ENST00000514335 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.85□□□□□ -1.15
NIPBL-208ENST00000514335 ZSCAN5CA6NGD5 496 aaPredicted RBP7.85□□□□□ -1.15
NIPBL-208ENST00000514335 GREM1O60565 184 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 SMIM24O75264 130 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 APEHP13798 732 aaKnown RBP7.85□□□□□ -1.15
NIPBL-208ENST00000514335 POU2F1P14859 743 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 GRK2P25098 689 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 EXOSC9Q06265 439 aaKnown RBP7.85□□□□□ -1.15
NIPBL-208ENST00000514335 CACNB2Q08289 660 aaPredicted RBP7.85□□□□□ -1.15
NIPBL-208ENST00000514335 TRIM71Q2Q1W2 868 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms