RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, human

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-216	ENST00000509784	WDR75	Q8IWA0	830 aa	Known RBP	4.17	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	FAM126B	Q8IXS8	530 aa		4.17	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	C7orf31	Q8N865	590 aa		4.17	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	TGFBRAP1	Q8WUH2	860 aa		4.17	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	DDX11	Q96FC9	970 aa		4.17	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	ZNF496	Q96IT1	587 aa	Predicted RBP	4.17	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	FAXDC2	Q96IV6	333 aa		4.17	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	PDGFD	Q9GZP0	370 aa	Predicted RBP	4.17	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	SEMA4A	Q9H3S1	761 aa		4.17	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	ZFP64	Q9NPA5	681 aa		4.17	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	UCKL1	Q9NWZ5	548 aa		4.17	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	MKS1	Q9NXB0	559 aa		4.17	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	DTL	Q9NZJ0	730 aa		4.17	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	ARHGAP28	Q9P2N2	729 aa		4.17	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	PLA2G2D	Q9UNK4	145 aa		4.17	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	4.17	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	WRN	Q14191	1432 aa	Predicted RBP eCLIP	4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	UBA6	A0AVT1	1052 aa	Predicted RBP	4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	BIN1	O00499	593 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	ABLIM1	O14639	778 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	TSPAN6	O43657	245 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	H2AFY	O75367	372 aa	Known RBP	4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	SNUPN	O95149	360 aa	Known RBP	4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	SCGB1D2	O95969	90 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	CFB	P00751	764 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	LRG1	P02750	347 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	CLEC2L	P0C7M8	214 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	VIPR1	P32241	457 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	MC4R	P32245	332 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	GPR3	P46089	330 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	HERVK_113	P62684	666 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	YBX1	P67809	324 aa	Known RBP	4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	ADCY1	Q08828	1119 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	DBP	Q10586	325 aa	Predicted RBP	4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	PIN1	Q13526	163 aa	Predicted RBP	4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	CD276	Q5ZPR3	534 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	TEPP	Q6URK8	271 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	MPZL3	Q6UWV2	235 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	CD300LD	Q6UXZ3	194 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	ETV3L	Q6ZN32	361 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	CBLL1	Q75N03	491 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	ZNF605	Q86T29	641 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	PNMA8A	Q86V59	439 aa	Predicted RBP	4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	AMIGO3	Q86WK7	504 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	NME9	Q86XW9	330 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	MIB1	Q86YT6	1006 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	IRF2BP1	Q8IU81	584 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	CILP2	Q8IUL8	1156 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	PHYKPL	Q8IUZ5	450 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	AMOTL1	Q8IY63	956 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	CHPF	Q8IZ52	775 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	FAM26E	Q8N5C1	309 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	C1orf162	Q8NEQ5	155 aa	Predicted RBP	4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	LMBR1	Q8WVP7	490 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	FOXRED1	Q96CU9	486 aa	Predicted RBP	4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	TUBGCP5	Q96RT8	1024 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	ANO3	Q9BYT9	981 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	POFUT1	Q9H488	388 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	SLC39A2	Q9NP94	309 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	RBPJL	Q9UBG7	517 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	IP6K2	Q9UHH9	426 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	KCNG1	Q9UIX4	513 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	ZNF180	Q9UJW8	692 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	LUC7L2	Q9Y383	392 aa	Known RBP	4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	ASB1	Q9Y576	335 aa		4.16	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	NACAD	O15069	1562 aa		4.15	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	E2F8	A0AVK6	867 aa		4.15	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	GOLGA6L22	H0YM25	854 aa		4.15	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	FZD9	O00144	591 aa		4.15	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	XPOT	O43592	962 aa	Known RBP	4.15	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	ASGR2	P07307	311 aa		4.15	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	ENO2	P09104	434 aa	Predicted RBP	4.15	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	RBP3	P10745	1247 aa		4.15	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	ZSCAN20	P17040	1043 aa	Predicted RBP	4.15	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	AOAH	P28039	575 aa		4.15	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	SRSF3	P84103	164 aa	Known RBP	4.15	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	SLC6A3	Q01959	620 aa		4.15	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	ACAP2	Q15057	778 aa		4.15	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	CT83	Q5H943	113 aa		4.15	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	TTC38	Q5R3I4	469 aa		4.15	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	CCDC181	Q5TID7	509 aa		4.15	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	PRAMEF9	Q5VWM5	478 aa		4.15	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	OLFML2B	Q68BL8	750 aa		4.15	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	TIGD7	Q6NT04	549 aa	Predicted RBP	4.15	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	TMC5	Q6UXY8	1006 aa		4.15	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	TTLL7	Q6ZT98	887 aa		4.15	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	ESPNL	Q6ZVH7	1005 aa		4.15	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	RTN4RL1	Q86UN2	441 aa	Predicted RBP	4.15	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	CXorf67	Q86X51	503 aa	Predicted RBP	4.15	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	LIN37	Q96GY3	246 aa	Predicted RBP	4.15	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	RTFDC1	Q9BY42	306 aa	Predicted RBP	4.15	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	LUC7L	Q9NQ29	371 aa	Known RBP	4.15	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	BTBD7	Q9P203	1132 aa		4.15	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	USP36	Q9P275	1121 aa	Known RBP	4.15	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	NOB1	Q9ULX3	412 aa	Known RBP	4.15	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	FAN1	Q9Y2M0	1017 aa		4.15	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	MRFAP1	Q9Y605	127 aa		4.15	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	KLHL33	A6NCF5	533 aa		4.14	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	ELL2	O00472	640 aa	Predicted RBP	4.14	□□□□□ -1.75
CALCOCO2-216	ENST00000509784	NFIB	O00712	420 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms