RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 WRAP73Q9P2S5 460 aaPredicted RBP16.21■□□□□ 0.19
USP11-212ENST00000497179 TRPC6Q9Y210 931 aa16.21■□□□□ 0.19
USP11-212ENST00000497179 ATP11BQ9Y2G3 1177 aa16.21■□□□□ 0.19
USP11-212ENST00000497179 SRPRBQ9Y5M8 271 aaKnown RBP16.21■□□□□ 0.19
USP11-212ENST00000497179 NRCAMQ92823 1304 aa16.2■□□□□ 0.18
USP11-212ENST00000497179 PP2D1A8MPX8 630 aa16.2■□□□□ 0.18
USP11-212ENST00000497179 HBP1O60381 514 aa16.2■□□□□ 0.18
USP11-212ENST00000497179 PQBP1O60828 265 aaKnown RBP16.2■□□□□ 0.18
USP11-212ENST00000497179 PPP6R2O75170 966 aa16.2■□□□□ 0.18
USP11-212ENST00000497179 MED24O75448 989 aa16.2■□□□□ 0.18
USP11-212ENST00000497179 STBD1O95210 358 aa16.2■□□□□ 0.18
USP11-212ENST00000497179 LYPLA2O95372 231 aa16.2■□□□□ 0.18
USP11-212ENST00000497179 RPA1P27694 616 aa16.2■□□□□ 0.18
USP11-212ENST00000497179 TLE2Q04725 743 aa16.2■□□□□ 0.18
USP11-212ENST00000497179 GRIN1Q05586 938 aa16.2■□□□□ 0.18
USP11-212ENST00000497179 PPFIA1Q13136 1202 aa16.2■□□□□ 0.18
USP11-212ENST00000497179 CTTNQ14247 550 aaKnown RBP16.2■□□□□ 0.18
USP11-212ENST00000497179 XKR3Q5GH77 459 aa16.2■□□□□ 0.18
USP11-212ENST00000497179 GDF6Q6KF10 455 aaPredicted RBP16.2■□□□□ 0.18
USP11-212ENST00000497179 C4orf19Q8IY42 314 aa16.2■□□□□ 0.18
USP11-212ENST00000497179 CKAP2LQ8IYA6 745 aa16.2■□□□□ 0.18
USP11-212ENST00000497179 KRI1Q8N9T8 703 aaKnown RBP16.2■□□□□ 0.18
USP11-212ENST00000497179 KCNG4Q8TDN1 519 aa16.2■□□□□ 0.18
USP11-212ENST00000497179 LMBR1Q8WVP7 490 aa16.2■□□□□ 0.18
USP11-212ENST00000497179 RCOR1Q9UKL0 485 aa16.2■□□□□ 0.18
USP11-212ENST00000497179 COL1A2P08123 1366 aa16.2■□□□□ 0.18
USP11-212ENST00000497179 C17orf102A2RUQ5 167 aa16.19■□□□□ 0.18
USP11-212ENST00000497179 TLR3O15455 904 aaKnown RBP16.19■□□□□ 0.18
USP11-212ENST00000497179 CD4P01730 458 aa16.19■□□□□ 0.18
USP11-212ENST00000497179 SPATA31C1P0DKV0 1188 aa16.19■□□□□ 0.18
USP11-212ENST00000497179 GNAT1P11488 350 aa16.19■□□□□ 0.18
USP11-212ENST00000497179 INSRRP14616 1297 aa16.19■□□□□ 0.18
USP11-212ENST00000497179 MUTP22033 750 aa16.19■□□□□ 0.18
USP11-212ENST00000497179 ADAM17P78536 824 aa16.19■□□□□ 0.18
USP11-212ENST00000497179 HIC1Q14526 733 aa16.19■□□□□ 0.18
USP11-212ENST00000497179 GRIK4Q16099 956 aa16.19■□□□□ 0.18
USP11-212ENST00000497179 ZNF484Q5JVG2 852 aa16.19■□□□□ 0.18
USP11-212ENST00000497179 CATSPER3Q86XQ3 398 aa16.19■□□□□ 0.18
USP11-212ENST00000497179 SNX29Q8TEQ0 813 aa16.19■□□□□ 0.18
USP11-212ENST00000497179 CHAMP1Q96JM3 812 aa16.19■□□□□ 0.18
USP11-212ENST00000497179 MMTAG2Q9BU76 263 aaKnown RBP16.19■□□□□ 0.18
USP11-212ENST00000497179 TRPV6Q9H1D0 765 aa16.19■□□□□ 0.18
USP11-212ENST00000497179 NRBP2Q9NSY0 501 aa16.19■□□□□ 0.18
USP11-212ENST00000497179 TRMT13Q9NUP7 481 aaKnown RBP16.19■□□□□ 0.18
USP11-212ENST00000497179 SETD4Q9NVD3 440 aa16.19■□□□□ 0.18
USP11-212ENST00000497179 MYH9P35579 1960 aaKnown RBP16.18■□□□□ 0.18
USP11-212ENST00000497179 RRN3P2A6NIE6 340 aa16.18■□□□□ 0.18
USP11-212ENST00000497179 DCDC2CA8MYV0 355 aa16.18■□□□□ 0.18
USP11-212ENST00000497179 ZBTB42B2RXF5 422 aa16.18■□□□□ 0.18
USP11-212ENST00000497179 SLC26A4O43511 780 aa16.18■□□□□ 0.18
USP11-212ENST00000497179 B4GALT4O60513 344 aa16.18■□□□□ 0.18
USP11-212ENST00000497179 NCLP19338 710 aaKnown RBP16.18■□□□□ 0.18
USP11-212ENST00000497179 CCT6AP40227 531 aaKnown RBP16.18■□□□□ 0.18
USP11-212ENST00000497179 KRT79Q5XKE5 535 aa16.18■□□□□ 0.18
USP11-212ENST00000497179 ANO5Q75V66 913 aa16.18■□□□□ 0.18
USP11-212ENST00000497179 TPH2Q8IWU9 490 aa16.18■□□□□ 0.18
USP11-212ENST00000497179 LEO1Q8WVC0 666 aaPredicted RBP16.18■□□□□ 0.18
USP11-212ENST00000497179 CTAGE1Q96RT6 745 aa16.18■□□□□ 0.18
USP11-212ENST00000497179 NIFKQ9BYG3 293 aaKnown RBP16.18■□□□□ 0.18
USP11-212ENST00000497179 CSRNP2Q9H175 543 aa16.18■□□□□ 0.18
USP11-212ENST00000497179 SEPT9Q9UHD8 586 aaPredicted RBP16.18■□□□□ 0.18
USP11-212ENST00000497179 KDM3AQ9Y4C1 1321 aa16.18■□□□□ 0.18
USP11-212ENST00000497179 MBLAC1A4D2B0 266 aaPredicted RBP16.17■□□□□ 0.18
USP11-212ENST00000497179 CDC25AP30304 524 aa16.17■□□□□ 0.18
USP11-212ENST00000497179 YWHABP31946 246 aaKnown RBP16.17■□□□□ 0.18
USP11-212ENST00000497179 FAAP100Q0VG06 881 aa16.17■□□□□ 0.18
USP11-212ENST00000497179 TARBP2Q15633 366 aaKnown RBP16.17■□□□□ 0.18
USP11-212ENST00000497179 PTGISQ16647 500 aa16.17■□□□□ 0.18
USP11-212ENST00000497179 HYIQ5T013 277 aa16.17■□□□□ 0.18
USP11-212ENST00000497179 MARCH8Q5T0T0 291 aa16.17■□□□□ 0.18
USP11-212ENST00000497179 POTEGQ6S5H5 508 aa16.17■□□□□ 0.18
USP11-212ENST00000497179 CABP7Q86V35 215 aa16.17■□□□□ 0.18
USP11-212ENST00000497179 CLIC6Q96NY7 704 aa16.17■□□□□ 0.18
USP11-212ENST00000497179 SCAND2PQ9GZW5 306 aaPredicted RBP16.17■□□□□ 0.18
USP11-212ENST00000497179 TUBE1Q9UJT0 475 aa16.17■□□□□ 0.18
USP11-212ENST00000497179 TMEM150BA6NC51 233 aa16.16■□□□□ 0.18
USP11-212ENST00000497179 DDX11L8A8MPP1 907 aa16.16■□□□□ 0.18
USP11-212ENST00000497179 TREHO43280 583 aa16.16■□□□□ 0.18
USP11-212ENST00000497179 CUTAO60888 179 aa16.16■□□□□ 0.18
USP11-212ENST00000497179 CLTBP09497 229 aa16.16■□□□□ 0.18
USP11-212ENST00000497179 UBA7P41226 1012 aa16.16■□□□□ 0.18
USP11-212ENST00000497179 IGBP1P78318 339 aa16.16■□□□□ 0.18
USP11-212ENST00000497179 ZNF200P98182 395 aaPredicted RBP16.16■□□□□ 0.18
USP11-212ENST00000497179 ECM1Q16610 540 aa16.16■□□□□ 0.18
USP11-212ENST00000497179 AXDND1Q5T1B0 1012 aaPredicted RBP16.16■□□□□ 0.18
USP11-212ENST00000497179 PLA2G4FQ68DD2 849 aa16.16■□□□□ 0.18
USP11-212ENST00000497179 TRMT1LQ7Z2T5 733 aaKnown RBP16.16■□□□□ 0.18
USP11-212ENST00000497179 SERINC5Q86VE9 423 aa16.16■□□□□ 0.18
USP11-212ENST00000497179 C7orf61Q8IZ16 206 aa16.16■□□□□ 0.18
USP11-212ENST00000497179 ZNF579Q8NAF0 562 aaKnown RBP16.16■□□□□ 0.18
USP11-212ENST00000497179 TRAPPC12Q8WVT3 735 aa16.16■□□□□ 0.18
USP11-212ENST00000497179 SPATA32Q96LK8 384 aa16.16■□□□□ 0.18
USP11-212ENST00000497179 NACC1Q96RE7 527 aa16.16■□□□□ 0.18
USP11-212ENST00000497179 CEP89Q96ST8 783 aa16.16■□□□□ 0.18
USP11-212ENST00000497179 PDLIM7Q9NR12 457 aa16.16■□□□□ 0.18
USP11-212ENST00000497179 ANKEF1Q9NU02 776 aa16.16■□□□□ 0.18
USP11-212ENST00000497179 TBX21Q9UL17 535 aa16.16■□□□□ 0.18
USP11-212ENST00000497179 NOD1Q9Y239 953 aa16.16■□□□□ 0.18
USP11-212ENST00000497179 PPME1Q9Y570 386 aa16.16■□□□□ 0.18
USP11-212ENST00000497179 ARID2Q68CP9 1835 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms