RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM2-211	ENST00000475835	LOC105371267	A0A1B0GV96	52 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	ARHGAP10	A1A4S6	786 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	CCDC151	A5D8V7	595 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	SRRM3	A6NNA2	597 aa	Predicted RBP	4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	FADS2P1	A8MWK0	482 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	ERVV-2	B6SEH9	535 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835		C9IYK1	514 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	GOLGA8M	H3BSY2	632 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	GOLGA8R	I6L899	631 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	TNFRSF10B	O14763	440 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	ZBTB43	O43298	467 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	STX6	O43752	255 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	RNGTT	O60942	597 aa	Known RBP	4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	USP2	O75604	605 aa	Predicted RBP	4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	SLITRK3	O94933	977 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	EPN2	O95208	641 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	FKBP9	O95302	570 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	TBC1D8	O95759	1140 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	KRT6A	P02538	564 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	KRT6B	P04259	564 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	LINGO3	P0C6S8	592 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	MTHFD1	P11586	935 aa	Known RBP	4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	PRKAR2A	P13861	404 aa	Known RBP	4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	EIF2S2	P20042	333 aa	Known RBP	4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	ATP4A	P20648	1035 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	RASA1	P20936	1047 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	PRKACB	P22694	351 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	CFL1	P23528	166 aa	Known RBP	4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	HMOX2	P30519	316 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	TXLNA	P40222	546 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	EVC	P57679	992 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	FOXK1	P85037	733 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	ZBTB16	Q05516	673 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	GALNT1	Q10472	559 aa	Predicted RBP	4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	DNAJC3	Q13217	504 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	MTX1	Q13505	466 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	RIPK1	Q13546	671 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	PDE3A	Q14432	1141 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	OASL	Q15646	514 aa	Known RBP	4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	NFE2	Q16621	373 aa	Predicted RBP	4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	GEN1	Q17RS7	908 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	SUPT20HL1	Q3ZLR7	823 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	ESCO1	Q5FWF5	840 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	FAM26D	Q5JW98	314 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	ZMYM1	Q5SVZ6	1142 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	DEPDC1	Q5TB30	811 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	ANO1	Q5XXA6	986 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	TRIM68	Q6AZZ1	485 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	SIGIRR	Q6IA17	410 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	ERAP2	Q6P179	960 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	FAM173B	Q6P4H8	233 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	KLC3	Q6P597	504 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	CCDC84	Q86UT8	332 aa	Predicted RBP	4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	USP48	Q86UV5	1035 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	EXOC3L1	Q86VI1	746 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	CADM3	Q8N126	398 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	LSMEM1	Q8N8F7	131 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	ABTB2	Q8N961	1025 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	STKLD1	Q8NE28	680 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	NPLOC4	Q8TAT6	608 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	CERK	Q8TCT0	537 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	HNRNPLL	Q8WVV9	542 aa	Known RBP	4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	FATE1	Q969F0	183 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	C7orf25	Q9BPX7	421 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	GPATCH1	Q9BRR8	931 aa	Known RBP	4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	RIOK1	Q9BRS2	568 aa	Known RBP	4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	HERPUD2	Q9BSE4	406 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	HGH1	Q9BTY7	390 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	FUT8	Q9BYC5	575 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	B3GNT4	Q9C0J1	378 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	MIS12	Q9H081	205 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	TPK1	Q9H3S4	243 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	HAUS4	Q9H6D7	363 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	UCK1	Q9HA47	277 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	PREB	Q9HCU5	417 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	ATP13A1	Q9HD20	1204 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	PTPRH	Q9HD43	1115 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	PRM3	Q9NNZ6	103 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	ARFGAP3	Q9NP61	516 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	UBN1	Q9NPG3	1134 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	ZNF277	Q9NRM2	450 aa	Predicted RBP	4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	HOMER2	Q9NSB8	354 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	ZBTB40	Q9NUA8	1239 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	ANO10	Q9NW15	660 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	EURL	Q9NYK6	297 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	DDX19B	Q9UMR2	479 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	ZBTB1	Q9Y2K1	713 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	NR2E3	Q9Y5X4	410 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	CAPN7	Q9Y6W3	813 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	SETBP1	Q9Y6X0	1596 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	UBN2	Q6ZU65	1347 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	MROH5	Q6ZUA9	1318 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	ERVK-7	P63135	1459 aa		4.17	□□□□□ -1.74
LSM2-211	ENST00000475835	PPRC1	Q5VV67	1664 aa	Known RBP	4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	EFCAB6	Q5THR3	1501 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	ARAP3	Q8WWN8	1544 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	PLEKHG1	Q9ULL1	1385 aa		4.16	□□□□□ -1.74

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