RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 C8orf48Q96LL4 319 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 HAUS7Q99871 368 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 AARSD1Q9BTE6 412 aaKnown RBP4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 ZCCHC17Q9NP64 241 aaKnown RBP4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 SLC39A2Q9NP94 309 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 GABBR1Q9UBS5 961 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 DDX20Q9UHI6 824 aaKnown RBP4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 DDX25Q9UHL0 483 aaKnown RBP4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 DNAI1Q9UI46 699 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 MYO6Q9UM54 1294 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 ASB3Q9Y575 518 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 FAM169AQ9Y6X4 670 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 DNMT1P26358 1616 aaKnown RBP4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 ARHGEF5Q12774 1597 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 ADGRL1O94910 1474 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 BCL9O00512 1426 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 FAM135BQ49AJ0 1406 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 SCO2A0A1W2PP80 73 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 C9IYK1 514 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 TMPRSS2O15393 492 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 DDX3YO15523 660 aaKnown RBP4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 CBFA2T2O43439 604 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 ADAM11O75078 769 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 ALDH1L1O75891 902 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 EYA4O95677 639 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 CAVIN2O95810 425 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 TP53P04637 393 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 ITGAVP06756 1048 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 FGFR1P11362 822 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 ELNP15502 786 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 ATP5JP18859 108 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 MAGEA10P43363 369 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 PAPOLAP51003 745 aaKnown RBP4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 CLNS1AP54105 237 aaKnown RBP4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 TBX4P57082 545 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 SESN3P58005 492 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 NLRP12P59046 1061 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 SUMO1P63165 101 aaKnown RBP4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 TUBB4BP68371 445 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 ID3Q02535 119 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 LRMPQ12912 555 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 MPP3Q13368 585 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 PRPF4BQ13523 1007 aaKnown RBP4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 ADGRE1Q14246 886 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 MBTPS1Q14703 1052 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 KCNB1Q14721 858 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 KIAA0753Q2KHM9 967 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 LONRF3Q496Y0 759 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 CCDC38Q502W7 563 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 TRIM61Q5EBN2 209 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 RRP12Q5JTH9 1297 aaKnown RBP4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 PRSS36Q5K4E3 855 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 BEND6Q5SZJ8 279 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 MFSD4BQ5TF39 518 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 EMC10Q5UCC4 262 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 TDRD10Q5VZ19 366 aaKnown RBP4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 HEATR6Q6AI08 1181 aaKnown RBP4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 CNNM4Q6P4Q7 775 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 C16orf87Q6PH81 154 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 CRELD2Q6UXH1 353 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 APBB1IPQ7Z5R6 666 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 STRA8Q7Z7C7 330 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 LRRTM3Q86VH5 581 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 LRRC8AQ8IWT6 810 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 LRRN4CLQ8ND94 238 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 ZNF507Q8TCN5 953 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 DDX1Q92499 740 aaKnown RBP4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 CUL5Q93034 780 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 OSBP2Q969R2 916 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 FAM81BQ96LP2 452 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 CCDC74BQ96LY2 380 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 CFAP53Q96M91 514 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 ANKRD27Q96NW4 1050 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 GORASP1Q9BQQ3 440 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 KLHL25Q9H0H3 589 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 OSBPL5Q9H0X9 879 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 VCPKMTQ9H867 229 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 FBRSQ9HAH7 460 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 ARFGAP3Q9NP61 516 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 INCENPQ9NQS7 918 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 CRIM1Q9NZV1 1036 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 TBC1D7Q9P0N9 293 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 MAGEC2Q9UBF1 373 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 APEX2Q9UBZ4 518 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 PPP1R9AQ9ULJ8 1098 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 L1RE1Q9UN81 338 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 SLC30A1Q9Y6M5 507 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 URB2Q14146 1524 aaKnown RBP4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 ADGRL3Q9HAR2 1447 aa4.04□□□□□ -1.76
HMGB3P8-201ENST00000449709 MYH15Q9Y2K3 1946 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 TARBP1Q13395 1621 aaKnown RBP4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 ABCA6Q8N139 1617 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 GRIN2DO15399 1336 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 SHTN1A0MZ66 631 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 USP27XA6NNY8 438 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 A6NNZ2 444 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 C9orf172C9J069 976 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 ATP6V1G1O75348 118 aa4.03□□□□□ -1.76
HMGB3P8-201ENST00000449709 CLEC3AO75596 197 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms