RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 POTEGQ6S5H5 508 aa16.04■□□□□ 0.16
CCNF-202ENST00000397066 POTEEQ6S8J3 1075 aa16.04■□□□□ 0.16
CCNF-202ENST00000397066 YTHDF3Q7Z739 585 aaKnown RBP16.04■□□□□ 0.16
CCNF-202ENST00000397066 MDM1Q8TC05 714 aa16.04■□□□□ 0.16
CCNF-202ENST00000397066 ZNF76P36508 570 aa16.04■□□□□ 0.16
CCNF-202ENST00000397066 STAT1P42224 750 aa16.04■□□□□ 0.16
CCNF-202ENST00000397066 PLTPP55058 493 aa16.04■□□□□ 0.16
CCNF-202ENST00000397066 TMEM119Q4V9L6 283 aa16.04■□□□□ 0.16
CCNF-202ENST00000397066 MFSD14BQ5SR56 506 aa16.04■□□□□ 0.16
CCNF-202ENST00000397066 RAPGEF5Q92565 580 aa16.04■□□□□ 0.16
CCNF-202ENST00000397066 PNMA6FA0A0J9YX94 578 aa16.04■□□□□ 0.16
CCNF-202ENST00000397066 USP17L15C9J2P7 530 aa16.04■□□□□ 0.16
CCNF-202ENST00000397066 USP17L13C9JLJ4 530 aa16.04■□□□□ 0.16
CCNF-202ENST00000397066 USP17L11C9JVI0 530 aa16.04■□□□□ 0.16
CCNF-202ENST00000397066 USP17L18D6R9N7 530 aa16.04■□□□□ 0.16
CCNF-202ENST00000397066 USP17L22D6RA61 530 aa16.04■□□□□ 0.16
CCNF-202ENST00000397066 USP17L17D6RBQ6 530 aa16.04■□□□□ 0.16
CCNF-202ENST00000397066 USP17L19D6RCP7 530 aa16.04■□□□□ 0.16
CCNF-202ENST00000397066 USP17L20D6RJB6 530 aa16.04■□□□□ 0.16
CCNF-202ENST00000397066 USP17L24Q0WX57 530 aa16.04■□□□□ 0.16
CCNF-202ENST00000397066 NEDD9Q14511 834 aa16.04■□□□□ 0.16
CCNF-202ENST00000397066 PPP1R7Q15435 360 aa16.04■□□□□ 0.16
CCNF-202ENST00000397066 USP17L6PQ6QN14 398 aa16.04■□□□□ 0.16
CCNF-202ENST00000397066 TPCN2Q8NHX9 752 aa16.04■□□□□ 0.16
CCNF-202ENST00000397066 BAIAP2L1Q9UHR4 511 aa16.04■□□□□ 0.16
CCNF-202ENST00000397066 SPDYE3A6NKU9 549 aa16.03■□□□□ 0.16
CCNF-202ENST00000397066 FLT3P36888 993 aa16.03■□□□□ 0.16
CCNF-202ENST00000397066 PARP9Q8IXQ6 854 aa16.03■□□□□ 0.16
CCNF-202ENST00000397066 ACTRT1Q8TDG2 376 aa16.03■□□□□ 0.16
CCNF-202ENST00000397066 ODF2LQ9ULJ1 636 aa16.03■□□□□ 0.16
CCNF-202ENST00000397066 FNTAP49354 379 aa16.03■□□□□ 0.16
CCNF-202ENST00000397066 PRR16Q569H4 304 aa16.03■□□□□ 0.16
CCNF-202ENST00000397066 DENND2CQ68D51 928 aa16.03■□□□□ 0.16
CCNF-202ENST00000397066 SAMD15Q9P1V8 674 aa16.03■□□□□ 0.16
CCNF-202ENST00000397066 ATXN2Q99700 1313 aaKnown RBP16.03■□□□□ 0.16
CCNF-202ENST00000397066 CYP4A11Q02928 519 aa16.03■□□□□ 0.16
CCNF-202ENST00000397066 DRP2Q13474 957 aa16.03■□□□□ 0.16
CCNF-202ENST00000397066 TTBK2Q6IQ55 1244 aa16.03■□□□□ 0.16
CCNF-202ENST00000397066 GJB7Q6PEY0 223 aa16.03■□□□□ 0.16
CCNF-202ENST00000397066 PPP4R3CPQ6ZMV5 832 aa16.03■□□□□ 0.16
CCNF-202ENST00000397066 PNMA8AQ86V59 439 aaPredicted RBP16.03■□□□□ 0.16
CCNF-202ENST00000397066 SFR1Q86XK3 245 aa16.03■□□□□ 0.16
CCNF-202ENST00000397066 CCDC50Q8IVM0 306 aa16.03■□□□□ 0.16
CCNF-202ENST00000397066 ADGRF4Q8IZF3 695 aa16.03■□□□□ 0.16
CCNF-202ENST00000397066 RPGRQ92834 1020 aaKnown RBP16.03■□□□□ 0.16
CCNF-202ENST00000397066 CALR3Q96L12 384 aaKnown RBP16.03■□□□□ 0.16
CCNF-202ENST00000397066 CDCA7Q9BWT1 371 aaPredicted RBP16.03■□□□□ 0.16
CCNF-202ENST00000397066 NEUROG2Q9H2A3 272 aa16.03■□□□□ 0.16
CCNF-202ENST00000397066 RASAL2Q9UJF2 1139 aa16.03■□□□□ 0.16
CCNF-202ENST00000397066 GBP2P32456 591 aaPredicted RBP16.02■□□□□ 0.16
CCNF-202ENST00000397066 MARCH10Q8NA82 808 aaPredicted RBP16.02■□□□□ 0.16
CCNF-202ENST00000397066 DAAM1Q9Y4D1 1078 aa16.02■□□□□ 0.16
CCNF-202ENST00000397066 ZNF335Q9H4Z2 1342 aaPredicted RBP16.02■□□□□ 0.16
CCNF-202ENST00000397066 C6orf229H3BNL8 230 aa16.02■□□□□ 0.16
CCNF-202ENST00000397066 COPB2P35606 906 aa16.02■□□□□ 0.16
CCNF-202ENST00000397066 CCDC25Q86WR0 208 aa16.02■□□□□ 0.16
CCNF-202ENST00000397066 CCDC197Q8NCU1 140 aa16.02■□□□□ 0.16
CCNF-202ENST00000397066 HVCN1Q96D96 273 aa16.02■□□□□ 0.16
CCNF-202ENST00000397066 SLITRK6Q9H5Y7 841 aa16.02■□□□□ 0.16
CCNF-202ENST00000397066 RGS16O15492 202 aaPredicted RBP16.02■□□□□ 0.15
CCNF-202ENST00000397066 TRAPPC3O43617 180 aa16.02■□□□□ 0.15
CCNF-202ENST00000397066 GCFC2P16383 781 aaKnown RBP16.02■□□□□ 0.15
CCNF-202ENST00000397066 PPP4CP60510 307 aa16.02■□□□□ 0.15
CCNF-202ENST00000397066 DR1Q01658 176 aa16.02■□□□□ 0.15
CCNF-202ENST00000397066 ZNF211Q13398 564 aaPredicted RBP16.02■□□□□ 0.15
CCNF-202ENST00000397066 QPCTQ16769 361 aa16.02■□□□□ 0.15
CCNF-202ENST00000397066 ZCWPW2Q504Y3 356 aa16.02■□□□□ 0.15
CCNF-202ENST00000397066 TBC1D31Q96DN5 1066 aa16.02■□□□□ 0.15
CCNF-202ENST00000397066 GANQ9H2C0 597 aa16.02■□□□□ 0.15
CCNF-202ENST00000397066 RIOX1Q9H6W3 641 aa16.02■□□□□ 0.15
CCNF-202ENST00000397066 CACNA1SQ13698 1873 aa16.02■□□□□ 0.15
CCNF-202ENST00000397066 ARAP2Q8WZ64 1704 aa16.02■□□□□ 0.15
CCNF-202ENST00000397066 TNFAIP3P21580 790 aa16.02■□□□□ 0.15
CCNF-202ENST00000397066 UAP1Q16222 522 aaPredicted RBP16.02■□□□□ 0.15
CCNF-202ENST00000397066 ARHGAP44Q17R89 818 aa16.02■□□□□ 0.15
CCNF-202ENST00000397066 AGBL2Q5U5Z8 902 aa16.02■□□□□ 0.15
CCNF-202ENST00000397066 ARMC9Q7Z3E5 817 aa16.02■□□□□ 0.15
CCNF-202ENST00000397066 LINC00116Q8NCU8 138 aa16.02■□□□□ 0.15
CCNF-202ENST00000397066 N4BP2L2Q92802 583 aaPredicted RBP16.02■□□□□ 0.15
CCNF-202ENST00000397066 NAP1L3Q99457 506 aaPredicted RBP16.02■□□□□ 0.15
CCNF-202ENST00000397066 PNMA2Q9UL42 364 aa16.02■□□□□ 0.15
CCNF-202ENST00000397066 ANKRD36CQ5JPF3 1778 aa16.01■□□□□ 0.15
CCNF-202ENST00000397066 USP17L10C9JJH3 530 aa16.01■□□□□ 0.15
CCNF-202ENST00000397066 CLSTN1O94985 981 aa16.01■□□□□ 0.15
CCNF-202ENST00000397066 CYP11B2P19099 503 aa16.01■□□□□ 0.15
CCNF-202ENST00000397066 IFNAR2P48551 515 aa16.01■□□□□ 0.15
CCNF-202ENST00000397066 KNOP1Q1ED39 458 aaKnown RBP16.01■□□□□ 0.15
CCNF-202ENST00000397066 SCFD2Q8WU76 684 aa16.01■□□□□ 0.15
CCNF-202ENST00000397066 NAP1L4Q99733 375 aaKnown RBP16.01■□□□□ 0.15
CCNF-202ENST00000397066 LEMD3Q9Y2U8 911 aa16.01■□□□□ 0.15
CCNF-202ENST00000397066 PON1P27169 355 aa16.01■□□□□ 0.15
CCNF-202ENST00000397066 SMARCA1P28370 1054 aa16.01■□□□□ 0.15
CCNF-202ENST00000397066 PLCB4Q15147 1175 aa16.01■□□□□ 0.15
CCNF-202ENST00000397066 CYB5D1Q6P9G0 228 aa16.01■□□□□ 0.15
CCNF-202ENST00000397066 GLYCTKQ8IVS8 523 aa16.01■□□□□ 0.15
CCNF-202ENST00000397066 HAS1Q92839 578 aa16.01■□□□□ 0.15
CCNF-202ENST00000397066 ZKSCAN4Q969J2 545 aaPredicted RBP16.01■□□□□ 0.15
CCNF-202ENST00000397066 MTMR4Q9NYA4 1195 aa16.01■□□□□ 0.15
CCNF-202ENST00000397066 SNX24Q9Y343 169 aa16.01■□□□□ 0.15
CCNF-202ENST00000397066 FERP16591 822 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms