RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 DDX39AO00148 427 aaKnown RBP17.5■□□□□ 0.39
PDZD4-202ENST00000393758 SHOX2O60902 331 aaPredicted RBP17.5■□□□□ 0.39
PDZD4-202ENST00000393758 CCDC63Q8NA47 563 aa17.5■□□□□ 0.39
PDZD4-202ENST00000393758 SEC16BQ96JE7 1060 aa17.5■□□□□ 0.39
PDZD4-202ENST00000393758 PSMD1Q99460 953 aa17.5■□□□□ 0.39
PDZD4-202ENST00000393758 SPZ1Q9BXG8 430 aa17.5■□□□□ 0.39
PDZD4-202ENST00000393758 EXOC3O60645 756 aa17.5■□□□□ 0.39
PDZD4-202ENST00000393758 PDHBP11177 359 aa17.5■□□□□ 0.39
PDZD4-202ENST00000393758 PDE6BP35913 854 aa17.5■□□□□ 0.39
PDZD4-202ENST00000393758 DR1Q01658 176 aa17.5■□□□□ 0.39
PDZD4-202ENST00000393758 CALCOCO2Q13137 446 aa17.5■□□□□ 0.39
PDZD4-202ENST00000393758 NFIXQ14938 502 aa17.5■□□□□ 0.39
PDZD4-202ENST00000393758 SLC51AQ86UW1 340 aa17.5■□□□□ 0.39
PDZD4-202ENST00000393758 CNBD1Q8NA66 436 aa17.5■□□□□ 0.39
PDZD4-202ENST00000393758 NSRP1Q9H0G5 558 aaKnown RBP17.5■□□□□ 0.39
PDZD4-202ENST00000393758 FLT1P17948 1338 aa17.5■□□□□ 0.39
PDZD4-202ENST00000393758 SCN11AQ9UI33 1791 aa17.5■□□□□ 0.39
PDZD4-202ENST00000393758 PURBQ96QR8 312 aaKnown RBP17.5■□□□□ 0.39
PDZD4-202ENST00000393758 VEZTQ9HBM0 779 aa17.5■□□□□ 0.39
PDZD4-202ENST00000393758 ASIC3Q9UHC3 531 aa17.5■□□□□ 0.39
PDZD4-202ENST00000393758 FRMD4BQ9Y2L6 1034 aa17.5■□□□□ 0.39
PDZD4-202ENST00000393758 COL5A2P05997 1499 aaPredicted RBP17.49■□□□□ 0.39
PDZD4-202ENST00000393758 TLR2O60603 784 aa17.49■□□□□ 0.39
PDZD4-202ENST00000393758 NEFHP12036 1026 aa17.49■□□□□ 0.39
PDZD4-202ENST00000393758 AKR1B1P15121 316 aa17.49■□□□□ 0.39
PDZD4-202ENST00000393758 MEI1Q5TIA1 1274 aa17.49■□□□□ 0.39
PDZD4-202ENST00000393758 ZNF571Q7Z3V5 609 aaPredicted RBP17.49■□□□□ 0.39
PDZD4-202ENST00000393758 THOC1Q96FV9 657 aaKnown RBP17.49■□□□□ 0.39
PDZD4-202ENST00000393758 NID2Q14112 1375 aa17.49■□□□□ 0.39
PDZD4-202ENST00000393758 NEBLO76041 1014 aa17.49■□□□□ 0.39
PDZD4-202ENST00000393758 SKOR1P84550 965 aa17.49■□□□□ 0.39
PDZD4-202ENST00000393758 ZNF746Q6NUN9 644 aaPredicted RBP17.49■□□□□ 0.39
PDZD4-202ENST00000393758 IQCKQ8N0W5 287 aa17.49■□□□□ 0.39
PDZD4-202ENST00000393758 ISCUQ9H1K1 167 aa17.49■□□□□ 0.39
PDZD4-202ENST00000393758 ZNF335Q9H4Z2 1342 aaPredicted RBP17.49■□□□□ 0.39
PDZD4-202ENST00000393758 SPEF2Q9C093 1822 aa17.49■□□□□ 0.39
PDZD4-202ENST00000393758 GRIPAP1Q4V328 841 aa17.49■□□□□ 0.39
PDZD4-202ENST00000393758 PARP9Q8IXQ6 854 aa17.49■□□□□ 0.39
PDZD4-202ENST00000393758 AZI2Q9H6S1 392 aa17.49■□□□□ 0.39
PDZD4-202ENST00000393758 HOXA13P31271 388 aaPredicted RBP17.48■□□□□ 0.39
PDZD4-202ENST00000393758 SNX1Q13596 522 aa17.48■□□□□ 0.39
PDZD4-202ENST00000393758 SLC35G1Q2M3R5 365 aa17.48■□□□□ 0.39
PDZD4-202ENST00000393758 SEL1L2Q5TEA6 688 aa17.48■□□□□ 0.39
PDZD4-202ENST00000393758 LRRC55Q6ZSA7 311 aa17.48■□□□□ 0.39
PDZD4-202ENST00000393758 ADGRF4Q8IZF3 695 aa17.48■□□□□ 0.39
PDZD4-202ENST00000393758 NEDD1Q8NHV4 660 aa17.48■□□□□ 0.39
PDZD4-202ENST00000393758 RAPGEF5Q92565 580 aa17.48■□□□□ 0.39
PDZD4-202ENST00000393758 GDF3Q9NR23 364 aa17.48■□□□□ 0.39
PDZD4-202ENST00000393758 GGA1Q9UJY5 639 aa17.48■□□□□ 0.39
PDZD4-202ENST00000393758 CETN1Q12798 172 aa17.48■□□□□ 0.39
PDZD4-202ENST00000393758 SF3B3Q15393 1217 aaKnown RBP17.48■□□□□ 0.39
PDZD4-202ENST00000393758 SLC30A10Q6XR72 485 aa17.48■□□□□ 0.39
PDZD4-202ENST00000393758 PHLDB2Q86SQ0 1253 aa17.48■□□□□ 0.39
PDZD4-202ENST00000393758 TMBIM4Q9HC24 238 aa17.48■□□□□ 0.39
PDZD4-202ENST00000393758 OSGEPQ9NPF4 335 aa17.48■□□□□ 0.39
PDZD4-202ENST00000393758 FAM114A2Q9NRY5 505 aa17.48■□□□□ 0.39
PDZD4-202ENST00000393758 NAGPAQ9UK23 515 aa17.48■□□□□ 0.39
PDZD4-202ENST00000393758 TRIM49P0CI25 452 aa17.48■□□□□ 0.39
PDZD4-202ENST00000393758 TRIM49CP0CI26 452 aa17.48■□□□□ 0.39
PDZD4-202ENST00000393758 FLT3P36888 993 aa17.48■□□□□ 0.39
PDZD4-202ENST00000393758 GALCP54803 685 aa17.48■□□□□ 0.39
PDZD4-202ENST00000393758 TRIP13Q15645 432 aaPredicted RBP17.48■□□□□ 0.39
PDZD4-202ENST00000393758 FAM186BQ8IYM0 893 aa17.48■□□□□ 0.39
PDZD4-202ENST00000393758 DAGLBQ8NCG7 672 aa17.48■□□□□ 0.39
PDZD4-202ENST00000393758 RSRC1Q96IZ7 334 aaKnown RBP17.48■□□□□ 0.39
PDZD4-202ENST00000393758 CEP63Q96MT8 703 aa17.48■□□□□ 0.39
PDZD4-202ENST00000393758 TBK1Q9UHD2 729 aa17.48■□□□□ 0.39
PDZD4-202ENST00000393758 BZW2Q9Y6E2 419 aaKnown RBP17.48■□□□□ 0.39
PDZD4-202ENST00000393758 NEK9Q8TD19 979 aa17.47■□□□□ 0.39
PDZD4-202ENST00000393758 NAP1L3Q99457 506 aaPredicted RBP17.47■□□□□ 0.39
PDZD4-202ENST00000393758 USP40Q9NVE5 1235 aa17.47■□□□□ 0.39
PDZD4-202ENST00000393758 DDX20Q9UHI6 824 aaKnown RBP17.47■□□□□ 0.39
PDZD4-202ENST00000393758 ZC3H4Q9UPT8 1303 aaKnown RBP17.47■□□□□ 0.39
PDZD4-202ENST00000393758 A0A1W2PRG0 241 aa17.47■□□□□ 0.39
PDZD4-202ENST00000393758 ACSL3O95573 720 aa17.47■□□□□ 0.39
PDZD4-202ENST00000393758 MYBP10242 640 aa17.47■□□□□ 0.39
PDZD4-202ENST00000393758 CASP4P49662 377 aa17.47■□□□□ 0.39
PDZD4-202ENST00000393758 USP11P51784 963 aa17.47■□□□□ 0.39
PDZD4-202ENST00000393758 CACNB3P54284 484 aa17.47■□□□□ 0.39
PDZD4-202ENST00000393758 BIRC3Q13489 604 aa17.47■□□□□ 0.39
PDZD4-202ENST00000393758 ZNF662Q6ZS27 426 aa17.47■□□□□ 0.39
PDZD4-202ENST00000393758 SUGP1Q8IWZ8 645 aaKnown RBP17.47■□□□□ 0.39
PDZD4-202ENST00000393758 GDAP1Q8TB36 358 aa17.47■□□□□ 0.39
PDZD4-202ENST00000393758 EDEM3Q9BZQ6 932 aa17.47■□□□□ 0.39
PDZD4-202ENST00000393758 PCIF1Q9H4Z3 704 aa17.47■□□□□ 0.39
PDZD4-202ENST00000393758 A0A1B0GUA9 196 aa17.47■□□□□ 0.39
PDZD4-202ENST00000393758 CFBP00751 764 aa17.47■□□□□ 0.39
PDZD4-202ENST00000393758 NR3C1P04150 777 aa17.47■□□□□ 0.39
PDZD4-202ENST00000393758 SLURP2P0DP57 97 aa17.47■□□□□ 0.39
PDZD4-202ENST00000393758 FGFR4P22455 802 aa17.47■□□□□ 0.39
PDZD4-202ENST00000393758 ITIH3Q06033 890 aa17.47■□□□□ 0.39
PDZD4-202ENST00000393758 CTTNQ14247 550 aaKnown RBP17.47■□□□□ 0.39
PDZD4-202ENST00000393758 ECM1Q16610 540 aa17.47■□□□□ 0.39
PDZD4-202ENST00000393758 MARF1Q9Y4F3 1742 aaKnown RBP17.46■□□□□ 0.39
PDZD4-202ENST00000393758 CCDC169A6NNP5 214 aa17.46■□□□□ 0.39
PDZD4-202ENST00000393758 ZNF844Q08AG5 666 aa17.46■□□□□ 0.39
PDZD4-202ENST00000393758 NBPF9Q3BBW0 867 aa17.46■□□□□ 0.39
PDZD4-202ENST00000393758 ASPRV1Q53RT3 343 aa17.46■□□□□ 0.39
PDZD4-202ENST00000393758 HGSNATQ68CP4 663 aa17.46■□□□□ 0.39
PDZD4-202ENST00000393758 CCDC50Q8IVM0 306 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms