RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 TTC38Q5R3I4 469 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 OLFML2BQ68BL8 750 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 C14orf80Q86SX3 495 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 TP53INP2Q8IXH6 220 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 C7orf31Q8N865 590 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 ABHD4Q8TB40 342 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 SHISA4Q96DD7 197 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 HSPBAP1Q96EW2 488 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 TSPAN17Q96FV3 270 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 ZNF496Q96IT1 587 aaPredicted RBP3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 AIFM3Q96NN9 605 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 GBP4Q96PP9 640 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 PSMD1Q99460 953 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 RTFDC1Q9BY42 306 aaPredicted RBP3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 RHOBTB2Q9BYZ6 727 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 C19orf44Q9H6X5 657 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 PCDH18Q9HCL0 1135 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 PRDM11Q9NQV5 511 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 SLC52A1Q9NWF4 448 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 MSRAQ9UJ68 235 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 INVSQ9Y283 1065 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 UBA6A0AVT1 1052 aaPredicted RBP3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 ZC3H12DA2A288 527 aaKnown RBP3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 PRAMEF25A6NGN4 478 aa3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 FZD9O00144 591 aa3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 MED26O95402 600 aa3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 MAP4K4O95819 1239 aaPredicted RBP3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 MT-CO1P00395 513 aa3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 ENO2P09104 434 aaPredicted RBP3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 MAPKAPK2P49137 400 aa3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 SLC5A3P53794 718 aa3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 MRPS9P82933 396 aaKnown RBP3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 ROM1Q03395 351 aa3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 OS9Q13438 667 aaPredicted RBP3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 MOGSQ13724 837 aa3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 PDCD1Q15116 288 aa3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 SEC23AQ15436 765 aa3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 CLUL1Q15846 466 aa3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 UGT8Q16880 541 aa3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 CATSPEREQ5SY80 951 aa3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 ZNF574Q6ZN55 896 aaPredicted RBP3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 CMTR2Q8IYT2 770 aaKnown RBP3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 HIPK4Q8NE63 616 aa3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 CALML6Q8TD86 181 aa3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 RTF1Q92541 710 aaKnown RBP3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 TOE1Q96GM8 510 aaKnown RBP3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 TUBGCP5Q96RT8 1024 aa3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 TNFRSF12AQ9NP84 129 aa3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 GABBR1Q9UBS5 961 aa3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 FBLN5Q9UBX5 448 aa3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 CTNND2Q9UQB3 1225 aa3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 YBX2Q9Y2T7 364 aaKnown RBP3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 NUMBLQ9Y6R0 609 aa3.83□□□□□ -1.8
TRAJ40-201ENST00000390497 ACOT7O00154 380 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 HRKO00198 91 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 XPOTO43592 962 aaKnown RBP3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 PCDHGA12O60330 932 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 IL33O95760 270 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 RNASE1P07998 156 aaKnown RBP3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 PF4V1P10720 104 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 HSPA6P17066 643 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 SSTR4P31391 388 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 BCAR1P56945 870 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 PRR5P85299 388 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 DBPQ10586 325 aaPredicted RBP3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 KIR3DS1Q14943 382 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 ACAP2Q15057 778 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 ANO4Q32M45 955 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 ESRP1Q6NXG1 681 aaKnown RBP3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 DGKHQ86XP1 1220 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 WFDC3Q8IUB2 231 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 RBM12BQ8IXT5 1001 aaKnown RBP3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 MIER2Q8N344 545 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 ARRDC4Q8NCT1 418 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 WDR48Q8TAF3 677 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 ASB15Q8WXK1 588 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 RPGRQ92834 1020 aaKnown RBP3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 FOXRED1Q96CU9 486 aaPredicted RBP3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 CLIP3Q96DZ5 547 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 DDX11Q96FC9 970 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 FOXB1Q99853 325 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 ZNF700Q9H0M5 742 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 CSRNP2Q9H175 543 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 SLC6A17Q9H1V8 727 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 PRDM7Q9NQW5 492 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 ZNF277Q9NRM2 450 aaPredicted RBP3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 MBNL3Q9NUK0 354 aaKnown RBP3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 C19orf73Q9NVV2 129 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 DNAJC28Q9NX36 388 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 ARHGAP28Q9P2N2 729 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 NOB1Q9ULX3 412 aaKnown RBP3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 TELO2Q9Y4R8 837 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 PCDHGA9Q9Y5G4 932 aaKnown RBP3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 PCDHGA8Q9Y5G5 932 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 PCDHGA7Q9Y5G6 932 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 PCDHGA6Q9Y5G7 932 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 PCDHGA3Q9Y5H0 932 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 PCDHGA2Q9Y5H1 932 aa3.82□□□□□ -1.8
TRAJ40-201ENST00000390497 GPR45Q9Y5Y3 372 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms