RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 ZNF577Q9BSK1 485 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 WNT8AQ9H1J5 351 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 EPN3Q9H201 632 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 UBE2TQ9NPD8 197 aaPredicted RBP10.28□□□□□ -0.76
SNX1-202ENST00000380285 STRIP2Q9ULQ0 834 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 PRPSAP2O60256 369 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 PALMO75781 387 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 BASP1P80723 227 aaKnown RBP10.28□□□□□ -0.76
SNX1-202ENST00000380285 SLC7A5Q01650 507 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 PDXDC1Q6P996 788 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 ICA1LQ8NDH6 482 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 PI4K2BQ8TCG2 481 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 SLC7A3Q8WY07 619 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 TRPA1O75762 1119 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 LDHAP00338 332 aaKnown RBP10.28□□□□□ -0.76
SNX1-202ENST00000380285 PMS2P54278 862 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 BEND6Q5SZJ8 279 aaPredicted RBP10.28□□□□□ -0.76
SNX1-202ENST00000380285 VPS39Q96JC1 886 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 KMT5AQ9NQR1 393 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 WDR70Q9NW82 654 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 AP3B2Q13367 1082 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 SRLQ86TD4 932 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 DNAJC10Q8IXB1 793 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 C3orf20Q8ND61 904 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 FBXL13Q8NEE6 735 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 CALB1P05937 261 aa10.27□□□□□ -0.76
SNX1-202ENST00000380285 C16orf87Q6PH81 154 aa10.27□□□□□ -0.76
SNX1-202ENST00000380285 GPIHBP1Q8IV16 184 aa10.27□□□□□ -0.76
SNX1-202ENST00000380285 SLC12A6Q9UHW9 1150 aa10.27□□□□□ -0.76
SNX1-202ENST00000380285 LRRIQ4A6NIV6 560 aa10.27□□□□□ -0.77
SNX1-202ENST00000380285 MEFVO15553 781 aaPredicted RBP10.27□□□□□ -0.77
SNX1-202ENST00000380285 GPC5P78333 572 aa10.27□□□□□ -0.77
SNX1-202ENST00000380285 RARS2Q5T160 578 aaKnown RBP10.27□□□□□ -0.77
SNX1-202ENST00000380285 MIS18BP1Q6P0N0 1132 aa10.27□□□□□ -0.77
SNX1-202ENST00000380285 DNAAF3Q8N9W5 541 aa10.27□□□□□ -0.77
SNX1-202ENST00000380285 KANSL2Q9H9L4 492 aa10.27□□□□□ -0.77
SNX1-202ENST00000380285 SPC25Q9HBM1 224 aa10.27□□□□□ -0.77
SNX1-202ENST00000380285 TBK1Q9UHD2 729 aa10.27□□□□□ -0.77
SNX1-202ENST00000380285 ARHGAP26Q9UNA1 814 aa10.27□□□□□ -0.77
SNX1-202ENST00000380285 TYW5A2RUC4 315 aaKnown RBP10.27□□□□□ -0.77
SNX1-202ENST00000380285 NCF2P19878 526 aaPredicted RBP10.27□□□□□ -0.77
SNX1-202ENST00000380285 KCNA4P22459 653 aa10.27□□□□□ -0.77
SNX1-202ENST00000380285 BTG4Q9NY30 223 aa10.27□□□□□ -0.77
SNX1-202ENST00000380285 ADGRG1Q9Y653 693 aa10.27□□□□□ -0.77
SNX1-202ENST00000380285 ITIH6Q6UXX5 1313 aa10.27□□□□□ -0.77
SNX1-202ENST00000380285 CYP2C19P33261 490 aa10.27□□□□□ -0.77
SNX1-202ENST00000380285 MAGOHP61326 146 aaKnown RBP10.27□□□□□ -0.77
SNX1-202ENST00000380285 CHRNDQ07001 517 aa10.27□□□□□ -0.77
SNX1-202ENST00000380285 IQGAP3Q86VI3 1631 aa10.27□□□□□ -0.77
SNX1-202ENST00000380285 XDHP47989 1333 aa10.27□□□□□ -0.77
SNX1-202ENST00000380285 HAUS5O94927 633 aa10.27□□□□□ -0.77
SNX1-202ENST00000380285 SERPINB2P05120 415 aa10.27□□□□□ -0.77
SNX1-202ENST00000380285 BTDP43251 543 aa10.27□□□□□ -0.77
SNX1-202ENST00000380285 SEL1LQ9UBV2 794 aa10.27□□□□□ -0.77
SNX1-202ENST00000380285 STXBP3O00186 592 aa10.27□□□□□ -0.77
SNX1-202ENST00000380285 SLCO1A2P46721 670 aa10.27□□□□□ -0.77
SNX1-202ENST00000380285 STAT2P52630 851 aa10.27□□□□□ -0.77
SNX1-202ENST00000380285 MYO1EQ12965 1108 aa10.27□□□□□ -0.77
SNX1-202ENST00000380285 TRIM72Q6ZMU5 477 aa10.27□□□□□ -0.77
SNX1-202ENST00000380285 DGKHQ86XP1 1220 aa10.27□□□□□ -0.77
SNX1-202ENST00000380285 FOXP3Q9BZS1 431 aa10.27□□□□□ -0.77
SNX1-202ENST00000380285 ZC4H2Q9NQZ6 224 aa10.27□□□□□ -0.77
SNX1-202ENST00000380285 ZBED1O96006 694 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 BCAMP50895 628 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 TMPRSS15P98073 1019 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 ITKQ08881 620 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 BYSLQ13895 437 aaKnown RBP10.26□□□□□ -0.77
SNX1-202ENST00000380285 ABCB5Q2M3G0 1257 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 METTL13Q8N6R0 699 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 MOV10L1Q9BXT6 1211 aaKnown RBP10.26□□□□□ -0.77
SNX1-202ENST00000380285 SLC38A10Q9HBR0 1119 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 SUN2Q9UH99 717 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 LRRN2O75325 713 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 ACSL3O95573 720 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 ATP1A3P13637 1013 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 SERPINB10P48595 397 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 PCYT1AP49585 367 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 TFDP2Q14188 446 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 MAPRE2Q15555 327 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 ENOSF1Q7L5Y1 443 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 TTC39CQ8N584 583 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 FGD4Q96M96 766 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 MTRQ99707 1265 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 ZNF804BA4D1E1 1349 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 GOLGA8FQ08AF8 430 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 GOLGA8DPQ0D2H9 430 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 ARL13BQ3SXY8 428 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 TSGA10IPQ3SY00 556 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 LRRC24Q50LG9 513 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 FLAD1Q8NFF5 587 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 DHX36Q9H2U1 1008 aaKnown RBP10.26□□□□□ -0.77
SNX1-202ENST00000380285 PNMA6FA0A0J9YX94 578 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 SMARCA1P28370 1054 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 PTPROQ16827 1216 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 RNF207Q6ZRF8 634 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 ANKRD7Q92527 254 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 SCHIP1Q9P0W5 487 aaPredicted RBP10.26□□□□□ -0.77
SNX1-202ENST00000380285 ANKARQ7Z5J8 1434 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 HSPA4LO95757 839 aa10.26□□□□□ -0.77
SNX1-202ENST00000380285 IL6STP40189 918 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms