RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 GCNT3O95395 438 aa27.6■■■□□ 2.01
CTSA-203ENST00000372459 FIGNQ5HY92 759 aa27.6■■■□□ 2.01
CTSA-203ENST00000372459 RAD9BQ6WBX8 426 aa27.6■■■□□ 2.01
CTSA-203ENST00000372459 ANKRD13AQ8IZ07 590 aa27.6■■■□□ 2.01
CTSA-203ENST00000372459 MYCT1Q8N699 235 aa27.6■■■□□ 2.01
CTSA-203ENST00000372459 TSC1Q92574 1164 aa27.6■■■□□ 2.01
CTSA-203ENST00000372459 TTYH3Q9C0H2 523 aa27.6■■■□□ 2.01
CTSA-203ENST00000372459 CALUO43852 315 aaPredicted RBP27.59■■■□□ 2.01
CTSA-203ENST00000372459 CCDC175P0C221 793 aa27.59■■■□□ 2.01
CTSA-203ENST00000372459 GUCY2CP25092 1073 aa27.59■■■□□ 2.01
CTSA-203ENST00000372459 QARSP47897 775 aaKnown RBP27.59■■■□□ 2.01
CTSA-203ENST00000372459 JAK3P52333 1124 aa27.59■■■□□ 2.01
CTSA-203ENST00000372459 MARSP56192 900 aaKnown RBP27.59■■■□□ 2.01
CTSA-203ENST00000372459 KRT76Q01546 638 aa27.59■■■□□ 2.01
CTSA-203ENST00000372459 ADAM9Q13443 819 aa27.59■■■□□ 2.01
CTSA-203ENST00000372459 MTF1Q14872 753 aa27.59■■■□□ 2.01
CTSA-203ENST00000372459 TSR1Q2NL82 804 aaKnown RBP27.59■■■□□ 2.01
CTSA-203ENST00000372459 CHST13Q8NET6 341 aa27.59■■■□□ 2.01
CTSA-203ENST00000372459 DNAJC7Q99615 494 aa27.59■■■□□ 2.01
CTSA-203ENST00000372459 ELP3Q9H9T3 547 aa27.59■■■□□ 2.01
CTSA-203ENST00000372459 PDXKO00764 312 aa27.59■■■□□ 2.01
CTSA-203ENST00000372459 CETN3O15182 167 aa27.59■■■□□ 2.01
CTSA-203ENST00000372459 ATP9AO75110 1047 aa27.59■■■□□ 2.01
CTSA-203ENST00000372459 PRPF6O94906 941 aaKnown RBP27.59■■■□□ 2.01
CTSA-203ENST00000372459 SFNP31947 248 aa27.59■■■□□ 2.01
CTSA-203ENST00000372459 ERO1BQ86YB8 467 aa27.59■■■□□ 2.01
CTSA-203ENST00000372459 PROCA1Q8NCQ7 364 aaPredicted RBP27.59■■■□□ 2.01
CTSA-203ENST00000372459 SFI1A8K8P3 1242 aa27.58■■■□□ 2.01
CTSA-203ENST00000372459 EIF3DO15371 548 aaKnown RBP eCLIP27.58■■■□□ 2.01
CTSA-203ENST00000372459 LYPLA2O95372 231 aa27.58■■■□□ 2.01
CTSA-203ENST00000372459 ZNF131P52739 623 aa27.58■■■□□ 2.01
CTSA-203ENST00000372459 LBX2Q6XYB7 198 aa27.58■■■□□ 2.01
CTSA-203ENST00000372459 INPP4AQ96PE3 977 aaPredicted RBP27.58■■■□□ 2.01
CTSA-203ENST00000372459 POLD4Q9HCU8 107 aa27.58■■■□□ 2.01
CTSA-203ENST00000372459 DBR1Q9UK59 544 aaKnown RBP27.58■■■□□ 2.01
CTSA-203ENST00000372459 WDR64B1ANS9 1081 aa27.57■■■□□ 2
CTSA-203ENST00000372459 KLK7P49862 253 aa27.57■■■□□ 2
CTSA-203ENST00000372459 ERVK-24P63145 666 aa27.57■■■□□ 2
CTSA-203ENST00000372459 GADL1Q6ZQY3 521 aa27.57■■■□□ 2
CTSA-203ENST00000372459 ANKRD7Q92527 254 aa27.57■■■□□ 2
CTSA-203ENST00000372459 OTUD5Q96G74 571 aa27.57■■■□□ 2
CTSA-203ENST00000372459 DESI2Q9BSY9 194 aa27.57■■■□□ 2
CTSA-203ENST00000372459 CCDC94Q9BW85 323 aaPredicted RBP27.57■■■□□ 2
CTSA-203ENST00000372459 TYW1Q9NV66 732 aaKnown RBP27.57■■■□□ 2
CTSA-203ENST00000372459 A0A0G2JLL6 359 aaPredicted RBP27.57■■■□□ 2
CTSA-203ENST00000372459 A0A1W2PQJ5 194 aa27.57■■■□□ 2
CTSA-203ENST00000372459 RASSF10A6NK89 507 aa27.57■■■□□ 2
CTSA-203ENST00000372459 IRF6O14896 467 aa27.57■■■□□ 2
CTSA-203ENST00000372459 STAM2O75886 525 aa27.57■■■□□ 2
CTSA-203ENST00000372459 NR2F2P24468 414 aa27.57■■■□□ 2
CTSA-203ENST00000372459 PRRT2Q7Z6L0 340 aaPredicted RBP27.57■■■□□ 2
CTSA-203ENST00000372459 ADGRG1Q9Y653 693 aa27.57■■■□□ 2
CTSA-203ENST00000372459 LOC285556D6RIA3 1793 aa27.56■■■□□ 2
CTSA-203ENST00000372459 HOXD13P35453 343 aa27.56■■■□□ 2
CTSA-203ENST00000372459 ETF1P62495 437 aaKnown RBP27.56■■■□□ 2
CTSA-203ENST00000372459 ZBED6P86452 979 aa27.56■■■□□ 2
CTSA-203ENST00000372459 TTLL12Q14166 644 aaPredicted RBP27.56■■■□□ 2
CTSA-203ENST00000372459 ZNF397Q8NF99 534 aaPredicted RBP27.56■■■□□ 2
CTSA-203ENST00000372459 RDM1Q8NG50 284 aa27.56■■■□□ 2
CTSA-203ENST00000372459 BCAS3Q9H6U6 928 aa27.56■■■□□ 2
CTSA-203ENST00000372459 SIK3Q9Y2K2 1263 aa27.56■■■□□ 2
CTSA-203ENST00000372459 CXCL11O14625 94 aa27.55■■■□□ 2
CTSA-203ENST00000372459 PADI6Q6TGC4 694 aa27.55■■■□□ 2
CTSA-203ENST00000372459 SYT10Q6XYQ8 523 aa27.55■■■□□ 2
CTSA-203ENST00000372459 STXBP4Q6ZWJ1 553 aa27.55■■■□□ 2
CTSA-203ENST00000372459 CDHR1Q96JP9 859 aa27.55■■■□□ 2
CTSA-203ENST00000372459 SPDYE5A6NIY4 337 aa27.55■■■□□ 2
CTSA-203ENST00000372459 PSMC5P62195 406 aa27.55■■■□□ 2
CTSA-203ENST00000372459 ZNF746Q6NUN9 644 aaPredicted RBP27.55■■■□□ 2
CTSA-203ENST00000372459 C4orf19Q8IY42 314 aa27.55■■■□□ 2
CTSA-203ENST00000372459 CLMNQ96JQ2 1002 aa27.55■■■□□ 2
CTSA-203ENST00000372459 AGPAT5Q9NUQ2 364 aa27.55■■■□□ 2
CTSA-203ENST00000372459 FBXO40Q9UH90 709 aa27.55■■■□□ 2
CTSA-203ENST00000372459 UBE4BO95155 1302 aa27.54■■■□□ 2
CTSA-203ENST00000372459 ZC3H4Q9UPT8 1303 aaKnown RBP27.54■■■□□ 2
CTSA-203ENST00000372459 ERCC3P19447 782 aa27.54■■■□□ 2
CTSA-203ENST00000372459 TRIM59Q8IWR1 403 aa27.54■■■□□ 2
CTSA-203ENST00000372459 FAM178BQ8IXR5 827 aa27.54■■■□□ 2
CTSA-203ENST00000372459 SENP7Q9BQF6 1050 aa27.54■■■□□ 2
CTSA-203ENST00000372459 FAM184BQ9ULE4 1060 aa27.54■■■□□ 2
CTSA-203ENST00000372459 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.54■■■□□ 2
CTSA-203ENST00000372459 A0A0G2JMZ2 1700 aa27.54■■■□□ 2
CTSA-203ENST00000372459 HIP1RO75146 1068 aa27.53■■■□□ 2
CTSA-203ENST00000372459 CCNE2O96020 404 aa27.53■■■□□ 2
CTSA-203ENST00000372459 RPL13P26373 211 aaKnown RBP27.53■■■□□ 2
CTSA-203ENST00000372459 NMT1P30419 496 aaKnown RBP27.53■■■□□ 2
CTSA-203ENST00000372459 RARRES1P49788 294 aa27.53■■■□□ 2
CTSA-203ENST00000372459 IRX3P78415 501 aaPredicted RBP27.53■■■□□ 2
CTSA-203ENST00000372459 TRIM65Q6PJ69 517 aa27.53■■■□□ 2
CTSA-203ENST00000372459 IWS1Q96ST2 819 aa27.53■■■□□ 2
CTSA-203ENST00000372459 ZNHIT6Q9NWK9 470 aaKnown RBP27.53■■■□□ 2
CTSA-203ENST00000372459 GLTPD2A6NH11 291 aa27.53■■■□□ 2
CTSA-203ENST00000372459 YWHABP31946 246 aaKnown RBP27.53■■■□□ 2
CTSA-203ENST00000372459 GNPTABQ3T906 1256 aa27.53■■■□□ 2
CTSA-203ENST00000372459 ODR4Q5SWX8 454 aa27.53■■■□□ 2
CTSA-203ENST00000372459 MOB2Q70IA6 237 aa27.53■■■□□ 2
CTSA-203ENST00000372459 ZNF720Q7Z2F6 126 aa27.53■■■□□ 2
CTSA-203ENST00000372459 RIOX2Q8IUF8 465 aa27.53■■■□□ 2
CTSA-203ENST00000372459 ANKRD35Q8N283 1001 aa27.53■■■□□ 2
CTSA-203ENST00000372459 DNERQ8NFT8 737 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms