RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 CCDC148Q8NFR7 591 aa11.68□□□□□ -0.54
COL5A1-202ENST00000371820 PPP1R13LQ8WUF5 828 aa11.68□□□□□ -0.54
COL5A1-202ENST00000371820 ATXN2LQ8WWM7 1075 aaKnown RBP11.68□□□□□ -0.54
COL5A1-202ENST00000371820 KAT2BQ92831 832 aa11.68□□□□□ -0.54
COL5A1-202ENST00000371820 TUT1Q9H6E5 874 aaKnown RBP11.68□□□□□ -0.54
COL5A1-202ENST00000371820 CBX8Q9HC52 389 aa11.68□□□□□ -0.54
COL5A1-202ENST00000371820 IMPACTQ9P2X3 320 aa11.68□□□□□ -0.54
COL5A1-202ENST00000371820 TFIP11Q9UBB9 837 aaKnown RBP11.68□□□□□ -0.54
COL5A1-202ENST00000371820 HDAC6Q9UBN7 1215 aa11.68□□□□□ -0.54
COL5A1-202ENST00000371820 ESYT2A0FGR8 921 aa11.67□□□□□ -0.54
COL5A1-202ENST00000371820 STXBP3O00186 592 aa11.67□□□□□ -0.54
COL5A1-202ENST00000371820 CCP110O43303 1012 aa11.67□□□□□ -0.54
COL5A1-202ENST00000371820 LGALS2P05162 132 aa11.67□□□□□ -0.54
COL5A1-202ENST00000371820 IQCF3P0C7M6 154 aa11.67□□□□□ -0.54
COL5A1-202ENST00000371820 LIG1P18858 919 aa11.67□□□□□ -0.54
COL5A1-202ENST00000371820 IGFBP4P22692 258 aa11.67□□□□□ -0.54
COL5A1-202ENST00000371820 GNA11P29992 359 aa11.67□□□□□ -0.54
COL5A1-202ENST00000371820 ZNF75DP51815 510 aa11.67□□□□□ -0.54
COL5A1-202ENST00000371820 FAM160A1Q05DH4 1040 aa11.67□□□□□ -0.54
COL5A1-202ENST00000371820 RBL2Q08999 1139 aa11.67□□□□□ -0.54
COL5A1-202ENST00000371820 SCRN1Q12765 414 aa11.67□□□□□ -0.54
COL5A1-202ENST00000371820 STK3Q13188 491 aa11.67□□□□□ -0.54
COL5A1-202ENST00000371820 PTK7Q13308 1070 aa11.67□□□□□ -0.54
COL5A1-202ENST00000371820 ANO6Q4KMQ2 910 aa11.67□□□□□ -0.54
COL5A1-202ENST00000371820 GDF6Q6KF10 455 aaPredicted RBP11.67□□□□□ -0.54
COL5A1-202ENST00000371820 FERMT3Q86UX7 667 aa11.67□□□□□ -0.54
COL5A1-202ENST00000371820 PLA2G4DQ86XP0 818 aa11.67□□□□□ -0.54
COL5A1-202ENST00000371820 TRIM22Q8IYM9 498 aa11.67□□□□□ -0.54
COL5A1-202ENST00000371820 ZFP91Q96JP5 570 aaPredicted RBP11.67□□□□□ -0.54
COL5A1-202ENST00000371820 SLC9A7Q96T83 725 aa11.67□□□□□ -0.54
COL5A1-202ENST00000371820 BPIFA3Q9BQP9 254 aa11.67□□□□□ -0.54
COL5A1-202ENST00000371820 RNF26Q9BY78 433 aaPredicted RBP11.67□□□□□ -0.54
COL5A1-202ENST00000371820 ANO3Q9BYT9 981 aa11.67□□□□□ -0.54
COL5A1-202ENST00000371820 C6orf50Q9HD87 102 aa11.67□□□□□ -0.54
COL5A1-202ENST00000371820 JADE2Q9NQC1 790 aa11.67□□□□□ -0.54
COL5A1-202ENST00000371820 FAM217BQ9NTX9 383 aaPredicted RBP11.67□□□□□ -0.54
COL5A1-202ENST00000371820 UBIAD1Q9Y5Z9 338 aa11.67□□□□□ -0.54
COL5A1-202ENST00000371820 TNFRSF10AO00220 468 aa11.66□□□□□ -0.54
COL5A1-202ENST00000371820 PRPF3O43395 683 aaKnown RBP11.66□□□□□ -0.54
COL5A1-202ENST00000371820 SORBS3O60504 671 aa11.66□□□□□ -0.54
COL5A1-202ENST00000371820 CA3P07451 260 aa11.66□□□□□ -0.54
COL5A1-202ENST00000371820 SELPP16109 830 aa11.66□□□□□ -0.54
COL5A1-202ENST00000371820 PDIA3P30101 505 aaKnown RBP11.66□□□□□ -0.54
COL5A1-202ENST00000371820 ADD1P35611 737 aaKnown RBP11.66□□□□□ -0.54
COL5A1-202ENST00000371820 SEMA3FQ13275 785 aa11.66□□□□□ -0.54
COL5A1-202ENST00000371820 SF3A1Q15459 793 aaKnown RBP11.66□□□□□ -0.54
COL5A1-202ENST00000371820 CCDC85BQ15834 202 aaPredicted RBP11.66□□□□□ -0.54
COL5A1-202ENST00000371820 LRRC8DQ7L1W4 858 aa11.66□□□□□ -0.54
COL5A1-202ENST00000371820 CEP57L1Q8IYX8 460 aa11.66□□□□□ -0.54
COL5A1-202ENST00000371820 PHOSPHO2Q8TCD6 241 aa11.66□□□□□ -0.54
COL5A1-202ENST00000371820 TIGD1Q96MW7 591 aa11.66□□□□□ -0.54
COL5A1-202ENST00000371820 ASB2Q96Q27 587 aa11.66□□□□□ -0.54
COL5A1-202ENST00000371820 CTAGE1Q96RT6 745 aa11.66□□□□□ -0.54
COL5A1-202ENST00000371820 GPR20Q99678 358 aa11.66□□□□□ -0.54
COL5A1-202ENST00000371820 MXRA8Q9BRK3 442 aa11.66□□□□□ -0.54
COL5A1-202ENST00000371820 C16orf70Q9BSU1 422 aa11.66□□□□□ -0.54
COL5A1-202ENST00000371820 HOOK1Q9UJC3 728 aaKnown RBP11.66□□□□□ -0.54
COL5A1-202ENST00000371820 TET1Q8NFU7 2136 aa11.65□□□□□ -0.54
COL5A1-202ENST00000371820 PTPRSQ13332 1948 aa11.65□□□□□ -0.54
COL5A1-202ENST00000371820 C17orf102A2RUQ5 167 aa11.65□□□□□ -0.54
COL5A1-202ENST00000371820 CPLX1O14810 134 aa11.65□□□□□ -0.54
COL5A1-202ENST00000371820 BAIAP3O94812 1187 aa11.65□□□□□ -0.54
COL5A1-202ENST00000371820 IFNAR1P17181 557 aa11.65□□□□□ -0.54
COL5A1-202ENST00000371820 ITGB5P18084 799 aa11.65□□□□□ -0.54
COL5A1-202ENST00000371820 ZNF76P36508 570 aa11.65□□□□□ -0.54
COL5A1-202ENST00000371820 SREBF1P36956 1147 aa11.65□□□□□ -0.54
COL5A1-202ENST00000371820 MRPS5P82675 430 aaKnown RBP11.65□□□□□ -0.54
COL5A1-202ENST00000371820 TYW1BQ6NUM6 668 aa11.65□□□□□ -0.54
COL5A1-202ENST00000371820 ELOA2Q8IYF1 753 aaPredicted RBP11.65□□□□□ -0.54
COL5A1-202ENST00000371820 REXO1Q8N1G1 1221 aaKnown RBP11.65□□□□□ -0.54
COL5A1-202ENST00000371820 SEPT1Q8WYJ6 367 aa11.65□□□□□ -0.54
COL5A1-202ENST00000371820 MRPS27Q92552 414 aaKnown RBP11.65□□□□□ -0.54
COL5A1-202ENST00000371820 WASF1Q92558 559 aa11.65□□□□□ -0.54
COL5A1-202ENST00000371820 SDF4Q9BRK5 362 aa11.65□□□□□ -0.54
COL5A1-202ENST00000371820 FTOQ9C0B1 505 aaKnown RBP eCLIP11.65□□□□□ -0.54
COL5A1-202ENST00000371820 ZMYND12Q9H0C1 365 aa11.65□□□□□ -0.54
COL5A1-202ENST00000371820 TTC12Q9H892 705 aaPredicted RBP11.65□□□□□ -0.54
COL5A1-202ENST00000371820 KCND1Q9NSA2 647 aa11.65□□□□□ -0.54
COL5A1-202ENST00000371820 FAM13BQ9NYF5 915 aa11.65□□□□□ -0.54
COL5A1-202ENST00000371820 NFASCO94856 1347 aa11.64□□□□□ -0.55
COL5A1-202ENST00000371820 EMSYQ7Z589 1322 aa11.64□□□□□ -0.55
COL5A1-202ENST00000371820 TRANK1O15050 2925 aa11.64□□□□□ -0.55
COL5A1-202ENST00000371820 EFCAB14O75071 495 aa11.64□□□□□ -0.55
COL5A1-202ENST00000371820 CAND2O75155 1236 aa11.64□□□□□ -0.55
COL5A1-202ENST00000371820 CKBP12277 381 aa11.64□□□□□ -0.55
COL5A1-202ENST00000371820 KCNA2P16389 499 aa11.64□□□□□ -0.55
COL5A1-202ENST00000371820 POU3F3P20264 500 aaPredicted RBP11.64□□□□□ -0.55
COL5A1-202ENST00000371820 TCF7P36402 384 aaPredicted RBP11.64□□□□□ -0.55
COL5A1-202ENST00000371820 CLK2P49760 499 aaKnown RBP11.64□□□□□ -0.55
COL5A1-202ENST00000371820 SP4Q02446 784 aa11.64□□□□□ -0.55
COL5A1-202ENST00000371820 CEP55Q53EZ4 464 aa11.64□□□□□ -0.55
COL5A1-202ENST00000371820 UTP14CQ5TAP6 766 aaKnown RBP11.64□□□□□ -0.55
COL5A1-202ENST00000371820 NIPA1Q7RTP0 329 aa11.64□□□□□ -0.55
COL5A1-202ENST00000371820 HERC6Q8IVU3 1022 aa11.64□□□□□ -0.55
COL5A1-202ENST00000371820 FAM177A1Q8N128 213 aaPredicted RBP11.64□□□□□ -0.55
COL5A1-202ENST00000371820 ADAMTS19Q8TE59 1207 aa11.64□□□□□ -0.55
COL5A1-202ENST00000371820 DHX38Q92620 1227 aaKnown RBP11.64□□□□□ -0.55
COL5A1-202ENST00000371820 ATP6V0A1Q93050 837 aa11.64□□□□□ -0.55
COL5A1-202ENST00000371820 CCDC34Q96HJ3 373 aa11.64□□□□□ -0.55
COL5A1-202ENST00000371820 PGBD1Q96JS3 809 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms