RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 PDE6CP51160 858 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 TUBB4BP68371 445 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 COASYQ13057 564 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 E2F5Q15329 346 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 SYCP2LQ5T4T6 812 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 CC2D1AQ6P1N0 951 aaPredicted RBP9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 CCDC89Q8N998 374 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 NLRP4Q96MN2 994 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 BARHL2Q9NY43 387 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 CSADQ9Y600 493 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 GAS8O95995 478 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 TMEM191BP0C7N4 346 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 CD44P16070 742 aaKnown RBP9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 CNGA1P29973 690 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 NSFP46459 744 aaKnown RBP9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 BARGINQ6ZT62 677 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 PTF1AQ7RTS3 328 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 GLYCTKQ8IVS8 523 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 SYCE1Q8N0S2 351 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 DCLK2Q8N568 766 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 LRRN4CLQ8ND94 238 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 SUPT20HQ8NEM7 779 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 ELMO3Q96BJ8 720 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 PANX2Q96RD6 677 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 USP42Q9H9J4 1324 aaKnown RBP9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 PIK3CAP42336 1068 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 MXI1P50539 228 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 SESN3P58005 492 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 LACTBP83111 547 aaPredicted RBP9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 ATP2C1P98194 919 aaPredicted RBP9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 TUBB2AQ13885 445 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 SETDB1Q15047 1291 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 TERF2Q15554 542 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 GEN1Q17RS7 908 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 ARL6IP4Q66PJ3 421 aaKnown RBP9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 PRR5LQ6MZQ0 368 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 FAM149B1Q96BN6 582 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 TUBB2BQ9BVA1 445 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 METTL14Q9HCE5 456 aaKnown RBP9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 SEPT10Q9P0V9 454 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 TTC7AQ9ULT0 858 aaPredicted RBP9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 DAGLAQ9Y4D2 1042 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 MEGF6O75095 1541 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 SPATA31A1Q5TZJ5 1347 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 FOSP01100 380 aaPredicted RBP9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 HMGB2P26583 209 aaKnown RBP9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 TOB1P50616 345 aaPredicted RBP9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 IRX4P78413 519 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 ALX1Q15699 326 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 FOXP4Q8IVH2 680 aaPredicted RBP9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 NOA1Q8NC60 698 aaKnown RBP9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 TRIM9Q9C026 710 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 DNAJC12Q9UKB3 198 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 DAAM1Q9Y4D1 1078 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 MAD1L1Q9Y6D9 718 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 ECE2O60344 883 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 NTSR2O95665 410 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 EN1Q05925 392 aaPredicted RBP9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 DMTNQ08495 405 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 NFIAQ12857 509 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 NNTQ13423 1086 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 SH2D3CQ8N5H7 860 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 TC2NQ8N9U0 490 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 GDAP1Q8TB36 358 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 TSNARE1Q96NA8 513 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 NT5C1BQ96P26 610 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 FAM118BQ9BPY3 351 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 FERMT1Q9BQL6 677 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 TRIM7Q9C029 511 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 NUCKS1Q9H1E3 243 aaKnown RBP9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 STK17AQ9UEE5 414 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 JRKLQ9Y4A0 524 aa9.88□□□□□ -0.83
SMARCA1-202ENST00000371122 EIF4E1BA6NMX2 242 aaKnown RBP9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 TROAPQ12815 778 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 CDO1Q16878 200 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 GNPTABQ3T906 1256 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 PDXDC2PQ6P474 469 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 TBC1D16Q8TBP0 767 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 CALN1Q9BXU9 219 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 COA1Q9GZY4 146 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 FBXO28Q9NVF7 368 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 LIMA1Q9UHB6 759 aaKnown RBP9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 TNS2Q63HR2 1409 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 ITGB4P16144 1822 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 KDM3BQ7LBC6 1761 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 MYMKA6NI61 221 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 MAPK4P31152 587 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 GGCXP38435 758 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 BAG6P46379 1132 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 EPC2Q52LR7 807 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 ZC2HC1CQ53FD0 456 aaPredicted RBP9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 UNC13DQ70J99 1090 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 TCP11Q8WWU5 503 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 SMC6Q96SB8 1091 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 RMDN3Q96TC7 470 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 STMN4Q9H169 189 aaPredicted RBP9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 FNDC3AQ9Y2H6 1198 aaKnown RBP9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 ZHX2Q9Y6X8 837 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 LY75O60449 1722 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms