RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 MYH1P12882 1939 aa18.39■□□□□ 0.54
DKC1-201ENST00000369550 BHMG1C9JSJ3 638 aaPredicted RBP18.39■□□□□ 0.54
DKC1-201ENST00000369550 PPFIA2O75334 1257 aa18.39■□□□□ 0.54
DKC1-201ENST00000369550 CDC25CP30307 473 aa18.39■□□□□ 0.54
DKC1-201ENST00000369550 IFNAR2P48551 515 aa18.39■□□□□ 0.54
DKC1-201ENST00000369550 TMEM266Q2M3C6 531 aa18.39■□□□□ 0.54
DKC1-201ENST00000369550 SLC35G1Q2M3R5 365 aa18.39■□□□□ 0.54
DKC1-201ENST00000369550 DENND2CQ68D51 928 aa18.39■□□□□ 0.54
DKC1-201ENST00000369550 ALKBH5Q6P6C2 394 aaKnown RBP18.39■□□□□ 0.54
DKC1-201ENST00000369550 ZNF571Q7Z3V5 609 aaPredicted RBP18.39■□□□□ 0.54
DKC1-201ENST00000369550 TPCN2Q8NHX9 752 aa18.39■□□□□ 0.54
DKC1-201ENST00000369550 MICAL1Q8TDZ2 1067 aa18.39■□□□□ 0.54
DKC1-201ENST00000369550 RAD54LQ92698 747 aa18.39■□□□□ 0.54
DKC1-201ENST00000369550 PNMA5Q96PV4 448 aa18.39■□□□□ 0.54
DKC1-201ENST00000369550 NSRP1Q9H0G5 558 aaKnown RBP18.39■□□□□ 0.54
DKC1-201ENST00000369550 CPVLQ9H3G5 476 aa18.39■□□□□ 0.54
DKC1-201ENST00000369550 IL17RBQ9NRM6 502 aa18.39■□□□□ 0.54
DKC1-201ENST00000369550 STX8Q9UNK0 236 aa18.39■□□□□ 0.54
DKC1-201ENST00000369550 WTIPA6NIX2 430 aaPredicted RBP18.39■□□□□ 0.53
DKC1-201ENST00000369550 RGS16O15492 202 aaPredicted RBP18.39■□□□□ 0.53
DKC1-201ENST00000369550 DIAPH2O60879 1101 aa18.39■□□□□ 0.53
DKC1-201ENST00000369550 CALCRLQ16602 461 aa18.39■□□□□ 0.53
DKC1-201ENST00000369550 SOGA3Q5TF21 947 aa18.39■□□□□ 0.53
DKC1-201ENST00000369550 SNX29Q8TEQ0 813 aa18.39■□□□□ 0.53
DKC1-201ENST00000369550 ATXN2LQ8WWM7 1075 aaKnown RBP18.39■□□□□ 0.53
DKC1-201ENST00000369550 ZMYND12Q9H0C1 365 aa18.39■□□□□ 0.53
DKC1-201ENST00000369550 CCDC113Q9H0I3 377 aa18.39■□□□□ 0.53
DKC1-201ENST00000369550 RAB17Q9H0T7 212 aa18.39■□□□□ 0.53
DKC1-201ENST00000369550 KIF9Q9HAQ2 790 aa18.39■□□□□ 0.53
DKC1-201ENST00000369550 ABCF3Q9NUQ8 709 aa18.39■□□□□ 0.53
DKC1-201ENST00000369550 GGT7Q9UJ14 662 aa18.39■□□□□ 0.53
DKC1-201ENST00000369550 CD2APQ9Y5K6 639 aa18.39■□□□□ 0.53
DKC1-201ENST00000369550 POTEMA6NI47 508 aa18.38■□□□□ 0.53
DKC1-201ENST00000369550 CCDC169A6NNP5 214 aa18.38■□□□□ 0.53
DKC1-201ENST00000369550 FGGP02679 453 aa18.38■□□□□ 0.53
DKC1-201ENST00000369550 GNA11P29992 359 aa18.38■□□□□ 0.53
DKC1-201ENST00000369550 MMP13P45452 471 aa18.38■□□□□ 0.53
DKC1-201ENST00000369550 KCNJ2P63252 427 aa18.38■□□□□ 0.53
DKC1-201ENST00000369550 PRPF4BQ13523 1007 aaKnown RBP18.38■□□□□ 0.53
DKC1-201ENST00000369550 SLMAPQ14BN4 828 aa18.38■□□□□ 0.53
DKC1-201ENST00000369550 NEK9Q8TD19 979 aa18.38■□□□□ 0.53
DKC1-201ENST00000369550 LRRC27Q9C0I9 530 aa18.38■□□□□ 0.53
DKC1-201ENST00000369550 SPATS2LQ9NUQ6 558 aaKnown RBP18.38■□□□□ 0.53
DKC1-201ENST00000369550 NAGPAQ9UK23 515 aa18.38■□□□□ 0.53
DKC1-201ENST00000369550 AGAP1Q9UPQ3 857 aa18.38■□□□□ 0.53
DKC1-201ENST00000369550 ZNF804BA4D1E1 1349 aa18.38■□□□□ 0.53
DKC1-201ENST00000369550 SPDYE3A6NKU9 549 aa18.38■□□□□ 0.53
DKC1-201ENST00000369550 GNA14O95837 355 aa18.38■□□□□ 0.53
DKC1-201ENST00000369550 GRIK3Q13003 919 aa18.38■□□□□ 0.53
DKC1-201ENST00000369550 ZNF268Q14587 947 aaPredicted RBP18.38■□□□□ 0.53
DKC1-201ENST00000369550 KRT79Q5XKE5 535 aa18.38■□□□□ 0.53
DKC1-201ENST00000369550 CAPRIN2Q6IMN6 1127 aaKnown RBP18.38■□□□□ 0.53
DKC1-201ENST00000369550 TRIM59Q8IWR1 403 aa18.38■□□□□ 0.53
DKC1-201ENST00000369550 AZI2Q9H6S1 392 aa18.38■□□□□ 0.53
DKC1-201ENST00000369550 ATP8A2Q9NTI2 1148 aa18.38■□□□□ 0.53
DKC1-201ENST00000369550 BIN2Q9UBW5 565 aaPredicted RBP18.38■□□□□ 0.53
DKC1-201ENST00000369550 AFF2P51816 1311 aa18.38■□□□□ 0.53
DKC1-201ENST00000369550 USP17L3A6NCW0 530 aa18.37■□□□□ 0.53
DKC1-201ENST00000369550 USP17L4A6NCW7 530 aa18.37■□□□□ 0.53
DKC1-201ENST00000369550 FLOT1O75955 427 aa18.37■□□□□ 0.53
DKC1-201ENST00000369550 ACTN1P12814 892 aa18.37■□□□□ 0.53
DKC1-201ENST00000369550 COASYQ13057 564 aa18.37■□□□□ 0.53
DKC1-201ENST00000369550 ZCWPW2Q504Y3 356 aa18.37■□□□□ 0.53
DKC1-201ENST00000369550 USP17L1Q7RTZ2 530 aa18.37■□□□□ 0.53
DKC1-201ENST00000369550 CEP120Q8N960 986 aa18.37■□□□□ 0.53
DKC1-201ENST00000369550 SEC14L1Q92503 715 aa18.37■□□□□ 0.53
DKC1-201ENST00000369550 RAB34Q9BZG1 259 aa18.37■□□□□ 0.53
DKC1-201ENST00000369550 COL1A1P02452 1464 aaPredicted RBP18.37■□□□□ 0.53
DKC1-201ENST00000369550 NQO1P15559 274 aaKnown RBP18.37■□□□□ 0.53
DKC1-201ENST00000369550 PMS2P54278 862 aa18.37■□□□□ 0.53
DKC1-201ENST00000369550 MECOMQ03112 1051 aa18.37■□□□□ 0.53
DKC1-201ENST00000369550 FAM26FQ5R3K3 315 aa18.37■□□□□ 0.53
DKC1-201ENST00000369550 ADAT2Q7Z6V5 191 aaKnown RBP18.37■□□□□ 0.53
DKC1-201ENST00000369550 ZNF483Q8TF39 744 aaPredicted RBP18.37■□□□□ 0.53
DKC1-201ENST00000369550 PGM2Q96G03 612 aa18.37■□□□□ 0.53
DKC1-201ENST00000369550 L3MBTL3Q96JM7 780 aaPredicted RBP18.37■□□□□ 0.53
DKC1-201ENST00000369550 CEP63Q96MT8 703 aa18.37■□□□□ 0.53
DKC1-201ENST00000369550 MTFR1LQ9H019 292 aa18.37■□□□□ 0.53
DKC1-201ENST00000369550 GANQ9H2C0 597 aa18.37■□□□□ 0.53
DKC1-201ENST00000369550 MKNK2Q9HBH9 465 aa18.37■□□□□ 0.53
DKC1-201ENST00000369550 KLRF2D3W0D1 207 aa18.37■□□□□ 0.53
DKC1-201ENST00000369550 UBOX5O94941 541 aa18.37■□□□□ 0.53
DKC1-201ENST00000369550 USP17L8P0C7I0 530 aa18.37■□□□□ 0.53
DKC1-201ENST00000369550 IFI35P80217 286 aaPredicted RBP18.37■□□□□ 0.53
DKC1-201ENST00000369550 DR1Q01658 176 aa18.37■□□□□ 0.53
DKC1-201ENST00000369550 BIRC2Q13490 618 aa18.37■□□□□ 0.53
DKC1-201ENST00000369550 SYCE1Q8N0S2 351 aa18.37■□□□□ 0.53
DKC1-201ENST00000369550 RASGEF1CQ8N431 466 aa18.37■□□□□ 0.53
DKC1-201ENST00000369550 NSUN4Q96CB9 384 aaKnown RBP18.37■□□□□ 0.53
DKC1-201ENST00000369550 ZNF570Q96NI8 536 aa18.37■□□□□ 0.53
DKC1-201ENST00000369550 PABPC3Q9H361 631 aaKnown RBP18.37■□□□□ 0.53
DKC1-201ENST00000369550 SUCLA2Q9P2R7 463 aaPredicted RBP18.37■□□□□ 0.53
DKC1-201ENST00000369550 BZW2Q9Y6E2 419 aaKnown RBP18.37■□□□□ 0.53
DKC1-201ENST00000369550 SPATA31A5Q5VU36 1347 aa18.36■□□□□ 0.53
DKC1-201ENST00000369550 SPATA31A7Q8IWB4 1347 aa18.36■□□□□ 0.53
DKC1-201ENST00000369550 GOLGA6L10A0A0M3HER8 536 aa18.36■□□□□ 0.53
DKC1-201ENST00000369550 TSPY3P0CV98 308 aa18.36■□□□□ 0.53
DKC1-201ENST00000369550 TSPY8P0CW00 308 aa18.36■□□□□ 0.53
DKC1-201ENST00000369550 ALDH5A1P51649 535 aaPredicted RBP18.36■□□□□ 0.53
DKC1-201ENST00000369550 PLTPP55058 493 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms