RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 DPP9Q86TI2 863 aa25.74■■□□□ 1.71
SDF4-202ENST00000360001 ATP6V0A1Q93050 837 aa25.74■■□□□ 1.71
SDF4-202ENST00000360001 DIS3Q9Y2L1 958 aaKnown RBP25.74■■□□□ 1.71
SDF4-202ENST00000360001 GGPS1O95749 300 aa25.73■■□□□ 1.71
SDF4-202ENST00000360001 GRM1Q13255 1194 aa25.73■■□□□ 1.71
SDF4-202ENST00000360001 CRHR2Q13324 411 aa25.73■■□□□ 1.71
SDF4-202ENST00000360001 CCDC62Q6P9F0 684 aa25.73■■□□□ 1.71
SDF4-202ENST00000360001 PAXIP1Q6ZW49 1069 aaPredicted RBP25.73■■□□□ 1.71
SDF4-202ENST00000360001 GUF1Q8N442 669 aaKnown RBP25.73■■□□□ 1.71
SDF4-202ENST00000360001 ZHX3Q9H4I2 956 aa25.73■■□□□ 1.71
SDF4-202ENST00000360001 TRIM49BA6NDI0 452 aa25.73■■□□□ 1.71
SDF4-202ENST00000360001 FANCCQ00597 558 aa25.73■■□□□ 1.71
SDF4-202ENST00000360001 HSP90AA4PQ58FG1 418 aa25.73■■□□□ 1.71
SDF4-202ENST00000360001 METTL7BQ6UX53 244 aa25.73■■□□□ 1.71
SDF4-202ENST00000360001 MAMDC4Q6UXC1 1216 aa25.73■■□□□ 1.71
SDF4-202ENST00000360001 FGFBP2Q9BYJ0 223 aa25.73■■□□□ 1.71
SDF4-202ENST00000360001 ANKEF1Q9NU02 776 aa25.73■■□□□ 1.71
SDF4-202ENST00000360001 TMEM150BA6NC51 233 aa25.72■■□□□ 1.71
SDF4-202ENST00000360001 STBD1O95210 358 aa25.72■■□□□ 1.71
SDF4-202ENST00000360001 CCNE1P24864 410 aa25.72■■□□□ 1.71
SDF4-202ENST00000360001 GUCY2CP25092 1073 aa25.72■■□□□ 1.71
SDF4-202ENST00000360001 CDKAL1Q5VV42 579 aa25.72■■□□□ 1.71
SDF4-202ENST00000360001 TTI2Q6NXR4 508 aa25.72■■□□□ 1.71
SDF4-202ENST00000360001 PADI6Q6TGC4 694 aa25.72■■□□□ 1.71
SDF4-202ENST00000360001 P2RX5Q93086 422 aa25.72■■□□□ 1.71
SDF4-202ENST00000360001 MAML3Q96JK9 1138 aa25.72■■□□□ 1.71
SDF4-202ENST00000360001 POLD4Q9HCU8 107 aa25.72■■□□□ 1.71
SDF4-202ENST00000360001 PDGFCQ9NRA1 345 aa25.72■■□□□ 1.71
SDF4-202ENST00000360001 TBC1D7Q9P0N9 293 aa25.72■■□□□ 1.71
SDF4-202ENST00000360001 IGSF9BQ9UPX0 1349 aa25.72■■□□□ 1.71
SDF4-202ENST00000360001 DOCK3Q8IZD9 2030 aa25.72■■□□□ 1.71
SDF4-202ENST00000360001 DKC1O60832 514 aaKnown RBP eCLIP25.71■■□□□ 1.712e-6■■■■□ 26.5
SDF4-202ENST00000360001 TBCAO75347 108 aaKnown RBP25.71■■□□□ 1.71
SDF4-202ENST00000360001 LRRC41Q15345 812 aa25.71■■□□□ 1.71
SDF4-202ENST00000360001 MORN1Q5T089 497 aa25.71■■□□□ 1.71
SDF4-202ENST00000360001 UTP14CQ5TAP6 766 aaKnown RBP25.71■■□□□ 1.71
SDF4-202ENST00000360001 ANO5Q75V66 913 aa25.71■■□□□ 1.71
SDF4-202ENST00000360001 SFR1Q86XK3 245 aa25.71■■□□□ 1.71
SDF4-202ENST00000360001 MRFAP1L1Q96HT8 127 aa25.71■■□□□ 1.71
SDF4-202ENST00000360001 COL4A3BPQ9Y5P4 624 aa25.71■■□□□ 1.71
SDF4-202ENST00000360001 IGKV6D-21A0A0A0MT36 114 aa25.71■■□□□ 1.71
SDF4-202ENST00000360001 GSTTP1A0A1W2PQM5 241 aa25.71■■□□□ 1.71
SDF4-202ENST00000360001 CELF3Q5SZQ8 465 aaKnown RBP25.71■■□□□ 1.71
SDF4-202ENST00000360001 CENPPQ6IPU0 288 aa25.71■■□□□ 1.71
SDF4-202ENST00000360001 NPLOC4Q8TAT6 608 aa25.71■■□□□ 1.71
SDF4-202ENST00000360001 SEMA6BQ9H3T3 888 aa25.71■■□□□ 1.71
SDF4-202ENST00000360001 VTA1Q9NP79 307 aa25.71■■□□□ 1.71
SDF4-202ENST00000360001 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.71■■□□□ 1.71
SDF4-202ENST00000360001 IFNKQ9P0W0 207 aa25.71■■□□□ 1.71
SDF4-202ENST00000360001 MYH9P35579 1960 aaKnown RBP25.7■■□□□ 1.7
SDF4-202ENST00000360001 BACH1O14867 736 aa25.7■■□□□ 1.7
SDF4-202ENST00000360001 TPD52L1Q16890 204 aaPredicted RBP25.7■■□□□ 1.7
SDF4-202ENST00000360001 PLA2G4FQ68DD2 849 aa25.7■■□□□ 1.7
SDF4-202ENST00000360001 TAPT1Q6NXT6 567 aa25.7■■□□□ 1.7
SDF4-202ENST00000360001 SCFD2Q8WU76 684 aa25.7■■□□□ 1.7
SDF4-202ENST00000360001 KATNBL1Q9H079 304 aa25.7■■□□□ 1.7
SDF4-202ENST00000360001 ODF2LQ9ULJ1 636 aa25.7■■□□□ 1.7
SDF4-202ENST00000360001 GAP43P17677 238 aa25.69■■□□□ 1.7
SDF4-202ENST00000360001 ZNF131P52739 623 aa25.69■■□□□ 1.7
SDF4-202ENST00000360001 TMEM63BQ5T3F8 832 aa25.69■■□□□ 1.7
SDF4-202ENST00000360001 ANKRD40Q6AI12 368 aa25.69■■□□□ 1.7
SDF4-202ENST00000360001 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.69■■□□□ 1.7
SDF4-202ENST00000360001 MYOCDQ8IZQ8 938 aa25.69■■□□□ 1.7
SDF4-202ENST00000360001 DUSP9Q99956 384 aaKnown RBP25.69■■□□□ 1.7
SDF4-202ENST00000360001 SH2D3AQ9BRG2 576 aa25.69■■□□□ 1.7
SDF4-202ENST00000360001 XPO4Q9C0E2 1151 aaKnown RBP25.69■■□□□ 1.7
SDF4-202ENST00000360001 MLXIPQ9HAP2 919 aa25.69■■□□□ 1.7
SDF4-202ENST00000360001 MAFBQ9Y5Q3 323 aaPredicted RBP25.69■■□□□ 1.7
SDF4-202ENST00000360001 BICDL2A1A5D9 508 aa25.69■■□□□ 1.7
SDF4-202ENST00000360001 CA12O43570 354 aa25.69■■□□□ 1.7
SDF4-202ENST00000360001 ECM2O94769 699 aaPredicted RBP25.69■■□□□ 1.7
SDF4-202ENST00000360001 FAM13AO94988 1023 aa25.69■■□□□ 1.7
SDF4-202ENST00000360001 SNAI1O95863 264 aaPredicted RBP25.69■■□□□ 1.7
SDF4-202ENST00000360001 TXNP10599 105 aaKnown RBP25.69■■□□□ 1.7
SDF4-202ENST00000360001 CDC25BP30305 580 aa25.69■■□□□ 1.7
SDF4-202ENST00000360001 NPEPPSP55786 919 aa25.69■■□□□ 1.7
SDF4-202ENST00000360001 PRKCEQ02156 737 aa25.69■■□□□ 1.7
SDF4-202ENST00000360001 TTLL4Q14679 1199 aa25.69■■□□□ 1.7
SDF4-202ENST00000360001 TRMT1LQ7Z2T5 733 aaKnown RBP25.69■■□□□ 1.7
SDF4-202ENST00000360001 ZNF302Q9NR11 478 aa25.69■■□□□ 1.7
SDF4-202ENST00000360001 SFI1A8K8P3 1242 aa25.68■■□□□ 1.7
SDF4-202ENST00000360001 MAPK7Q13164 816 aa25.68■■□□□ 1.7
SDF4-202ENST00000360001 XKR9Q5GH70 373 aa25.68■■□□□ 1.7
SDF4-202ENST00000360001 DAW1Q8N136 415 aa25.68■■□□□ 1.7
SDF4-202ENST00000360001 OLFML3Q9NRN5 406 aa25.68■■□□□ 1.7
SDF4-202ENST00000360001 ARID2Q68CP9 1835 aa25.68■■□□□ 1.7
SDF4-202ENST00000360001 RBM47A0AV96 593 aaKnown RBP25.67■■□□□ 1.7
SDF4-202ENST00000360001 HIP1RO75146 1068 aa25.67■■□□□ 1.7
SDF4-202ENST00000360001 SERPINC1P01008 464 aa25.67■■□□□ 1.7
SDF4-202ENST00000360001 ATP4AP20648 1035 aa25.67■■□□□ 1.7
SDF4-202ENST00000360001 CDK11BP21127 795 aaKnown RBP25.67■■□□□ 1.7
SDF4-202ENST00000360001 CASP5P51878 434 aa25.67■■□□□ 1.7
SDF4-202ENST00000360001 MAP2K5Q13163 448 aa25.67■■□□□ 1.7
SDF4-202ENST00000360001 NOGQ13253 232 aa25.67■■□□□ 1.7
SDF4-202ENST00000360001 OTUD6AQ7L8S5 288 aa25.67■■□□□ 1.7
SDF4-202ENST00000360001 SCFD1Q8WVM8 642 aa25.67■■□□□ 1.7
SDF4-202ENST00000360001 SEPT1Q8WYJ6 367 aa25.67■■□□□ 1.7
SDF4-202ENST00000360001 COPS5Q92905 334 aa25.67■■□□□ 1.7
SDF4-202ENST00000360001 TRIM47Q96LD4 638 aa25.67■■□□□ 1.7
SDF4-202ENST00000360001 CCDC43Q96MW1 224 aaKnown RBP25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms