RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 RNF186Q9NXI6 227 aa16.36■□□□□ 0.21
CXCL12-201ENST00000343575 NPHP3-ACAD11A0A0J9YXS1 232 aa16.35■□□□□ 0.21
CXCL12-201ENST00000343575 GSTTP1A0A1W2PQM5 241 aa16.35■□□□□ 0.21
CXCL12-201ENST00000343575 RHOBTB3O94955 611 aa16.35■□□□□ 0.21
CXCL12-201ENST00000343575 GGPS1O95749 300 aa16.35■□□□□ 0.21
CXCL12-201ENST00000343575 LACTBP83111 547 aaPredicted RBP16.35■□□□□ 0.21
CXCL12-201ENST00000343575 AMPD3Q01432 767 aa16.35■□□□□ 0.21
CXCL12-201ENST00000343575 EHHADHQ08426 723 aa16.35■□□□□ 0.21
CXCL12-201ENST00000343575 NEDD9Q14511 834 aa16.35■□□□□ 0.21
CXCL12-201ENST00000343575 KCNB1Q14721 858 aa16.35■□□□□ 0.21
CXCL12-201ENST00000343575 LUZP1Q86V48 1076 aa16.35■□□□□ 0.21
CXCL12-201ENST00000343575 CCDC60Q8IWA6 550 aaPredicted RBP16.35■□□□□ 0.21
CXCL12-201ENST00000343575 NACC1Q96RE7 527 aa16.35■□□□□ 0.21
CXCL12-201ENST00000343575 PCYT2Q99447 389 aa16.35■□□□□ 0.21
CXCL12-201ENST00000343575 VTA1Q9NP79 307 aa16.35■□□□□ 0.21
CXCL12-201ENST00000343575 IGKV6D-21A0A0A0MT36 114 aa16.35■□□□□ 0.21
CXCL12-201ENST00000343575 TMEM150BA6NC51 233 aa16.35■□□□□ 0.21
CXCL12-201ENST00000343575 TNPO2O14787 897 aaKnown RBP16.35■□□□□ 0.21
CXCL12-201ENST00000343575 SSBP05455 408 aaKnown RBP eCLIP16.35■□□□□ 0.21
CXCL12-201ENST00000343575 CELF3Q5SZQ8 465 aaKnown RBP16.35■□□□□ 0.21
CXCL12-201ENST00000343575 GJC2Q5T442 439 aaPredicted RBP16.35■□□□□ 0.21
CXCL12-201ENST00000343575 SWSAP1Q6NVH7 229 aa16.35■□□□□ 0.21
CXCL12-201ENST00000343575 KCNV1Q6PIU1 500 aa16.35■□□□□ 0.21
CXCL12-201ENST00000343575 METTL7BQ6UX53 244 aa16.35■□□□□ 0.21
CXCL12-201ENST00000343575 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.35■□□□□ 0.21
CXCL12-201ENST00000343575 GPBP1Q86WP2 473 aa16.35■□□□□ 0.21
CXCL12-201ENST00000343575 DHX40Q8IX18 779 aaKnown RBP16.35■□□□□ 0.21
CXCL12-201ENST00000343575 C4orf19Q8IY42 314 aa16.35■□□□□ 0.21
CXCL12-201ENST00000343575 ZNF830Q96NB3 372 aaPredicted RBP16.35■□□□□ 0.21
CXCL12-201ENST00000343575 RUSC1Q9BVN2 902 aa16.35■□□□□ 0.21
CXCL12-201ENST00000343575 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.34■□□□□ 0.21
CXCL12-201ENST00000343575 PPP1R3GB7ZBB8 358 aa16.34■□□□□ 0.21
CXCL12-201ENST00000343575 TRPA1O75762 1119 aa16.34■□□□□ 0.21
CXCL12-201ENST00000343575 CAVIN2O95810 425 aa16.34■□□□□ 0.21
CXCL12-201ENST00000343575 TXNP10599 105 aaKnown RBP16.34■□□□□ 0.21
CXCL12-201ENST00000343575 ATP4AP20648 1035 aa16.34■□□□□ 0.21
CXCL12-201ENST00000343575 CYP2B6P20813 491 aa16.34■□□□□ 0.21
CXCL12-201ENST00000343575 PSMC5P62195 406 aa16.34■□□□□ 0.21
CXCL12-201ENST00000343575 ASIC1P78348 528 aa16.34■□□□□ 0.21
CXCL12-201ENST00000343575 HSDL1Q3SXM5 330 aa16.34■□□□□ 0.21
CXCL12-201ENST00000343575 RINT1Q6NUQ1 792 aa16.34■□□□□ 0.21
CXCL12-201ENST00000343575 C1orf186Q6ZWK4 172 aa16.34■□□□□ 0.21
CXCL12-201ENST00000343575 MSL3Q8N5Y2 521 aaKnown RBP16.34■□□□□ 0.21
CXCL12-201ENST00000343575 SCFD2Q8WU76 684 aa16.34■□□□□ 0.21
CXCL12-201ENST00000343575 HPS3Q969F9 1004 aa16.34■□□□□ 0.21
CXCL12-201ENST00000343575 GABBR1Q9UBS5 961 aa16.34■□□□□ 0.21
CXCL12-201ENST00000343575 GDAQ9Y2T3 454 aa16.34■□□□□ 0.21
CXCL12-201ENST00000343575 ADCY6O43306 1168 aa16.33■□□□□ 0.21
CXCL12-201ENST00000343575 SUPT20HL2P0C7V6 817 aa16.33■□□□□ 0.21
CXCL12-201ENST00000343575 ADCYAP1R1P41586 468 aa16.33■□□□□ 0.21
CXCL12-201ENST00000343575 PSMC4P43686 418 aa16.33■□□□□ 0.21
CXCL12-201ENST00000343575 CACNB1Q02641 598 aaPredicted RBP16.33■□□□□ 0.21
CXCL12-201ENST00000343575 RAD51AP2Q09MP3 1159 aa16.33■□□□□ 0.21
CXCL12-201ENST00000343575 GIT2Q14161 759 aa16.33■□□□□ 0.21
CXCL12-201ENST00000343575 PRAMEF19Q5SWL8 479 aa16.33■□□□□ 0.21
CXCL12-201ENST00000343575 GIMAP8Q8ND71 665 aaPredicted RBP16.33■□□□□ 0.21
CXCL12-201ENST00000343575 SH2D3AQ9BRG2 576 aa16.33■□□□□ 0.21
CXCL12-201ENST00000343575 GABRQQ9UN88 632 aa16.33■□□□□ 0.21
CXCL12-201ENST00000343575 THSD7BQ9C0I4 1608 aa16.33■□□□□ 0.2
CXCL12-201ENST00000343575 PVALEFA0A1B0GWK0 134 aa16.33■□□□□ 0.2
CXCL12-201ENST00000343575 FRMD3A2A2Y4 597 aa16.33■□□□□ 0.2
CXCL12-201ENST00000343575 PSAPP07602 524 aa16.33■□□□□ 0.2
CXCL12-201ENST00000343575 RARRES1P49788 294 aa16.33■□□□□ 0.2
CXCL12-201ENST00000343575 STK4Q13043 487 aa16.33■□□□□ 0.2
CXCL12-201ENST00000343575 ACVR2BQ13705 512 aa16.33■□□□□ 0.2
CXCL12-201ENST00000343575 TTLL4Q14679 1199 aa16.33■□□□□ 0.2
CXCL12-201ENST00000343575 NCAPHQ15003 741 aa16.33■□□□□ 0.2
CXCL12-201ENST00000343575 ZNF658Q5TYW1 1059 aaPredicted RBP16.33■□□□□ 0.2
CXCL12-201ENST00000343575 UNC13DQ70J99 1090 aa16.33■□□□□ 0.2
CXCL12-201ENST00000343575 ANO5Q75V66 913 aa16.33■□□□□ 0.2
CXCL12-201ENST00000343575 MLKLQ8NB16 471 aa16.33■□□□□ 0.2
CXCL12-201ENST00000343575 SOCS4Q8WXH5 440 aa16.33■□□□□ 0.2
CXCL12-201ENST00000343575 ABHD16BQ9H3Z7 469 aa16.33■□□□□ 0.2
CXCL12-201ENST00000343575 SLC5A4Q9NY91 659 aa16.33■□□□□ 0.2
CXCL12-201ENST00000343575 MAFBQ9Y5Q3 323 aaPredicted RBP16.33■□□□□ 0.2
CXCL12-201ENST00000343575 IGSF9BQ9UPX0 1349 aa16.33■□□□□ 0.2
CXCL12-201ENST00000343575 YWHABP31946 246 aaKnown RBP16.32■□□□□ 0.2
CXCL12-201ENST00000343575 CYP2C19P33261 490 aa16.32■□□□□ 0.2
CXCL12-201ENST00000343575 RGS2P41220 211 aa16.32■□□□□ 0.2
CXCL12-201ENST00000343575 ARHGAP1Q07960 439 aa16.32■□□□□ 0.2
CXCL12-201ENST00000343575 MIS18BP1Q6P0N0 1132 aa16.32■□□□□ 0.2
CXCL12-201ENST00000343575 GPR20Q99678 358 aa16.32■□□□□ 0.2
CXCL12-201ENST00000343575 APBA2Q99767 749 aa16.32■□□□□ 0.2
CXCL12-201ENST00000343575 BPIFA3Q9BQP9 254 aa16.32■□□□□ 0.2
CXCL12-201ENST00000343575 REEP2Q9BRK0 252 aa16.32■□□□□ 0.2
CXCL12-201ENST00000343575 LRRC27Q9C0I9 530 aa16.32■□□□□ 0.2
CXCL12-201ENST00000343575 HSD3B7Q9H2F3 369 aa16.32■□□□□ 0.2
CXCL12-201ENST00000343575 MLXIPQ9HAP2 919 aa16.32■□□□□ 0.2
CXCL12-201ENST00000343575 POLD4Q9HCU8 107 aa16.32■□□□□ 0.2
CXCL12-201ENST00000343575 TCEAL9Q9UHQ7 104 aa16.32■□□□□ 0.2
CXCL12-201ENST00000343575 DBR1Q9UK59 544 aaKnown RBP16.32■□□□□ 0.2
CXCL12-201ENST00000343575 PAXBP1Q9Y5B6 917 aa16.32■□□□□ 0.2
CXCL12-201ENST00000343575 SMTNL1A8MU46 457 aa16.31■□□□□ 0.2
CXCL12-201ENST00000343575 RIOK3O14730 519 aaKnown RBP16.31■□□□□ 0.2
CXCL12-201ENST00000343575 ZNF865P0CJ78 1059 aaPredicted RBP16.31■□□□□ 0.2
CXCL12-201ENST00000343575 SMPD1P17405 629 aa16.31■□□□□ 0.2
CXCL12-201ENST00000343575 FCGRTP55899 365 aa16.31■□□□□ 0.2
CXCL12-201ENST00000343575 SP3Q02447 781 aa16.31■□□□□ 0.2
CXCL12-201ENST00000343575 OLFML2BQ68BL8 750 aa16.31■□□□□ 0.2
CXCL12-201ENST00000343575 TRMT1LQ7Z2T5 733 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms