RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 LSM14BQ9BX40 385 aaKnown RBP6.59□□□□□ -1.35
VCAN-203ENST00000343200 CCDC59Q9P031 241 aaKnown RBP6.59□□□□□ -1.35
VCAN-203ENST00000343200 DNAJC12Q9UKB3 198 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 FAM135BQ49AJ0 1406 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 CLASP2O75122 1294 aaKnown RBP6.59□□□□□ -1.35
VCAN-203ENST00000343200 KRT37O76014 449 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 SAT1P21673 171 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 HOXC8P31273 242 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 YWHABP31946 246 aaKnown RBP6.59□□□□□ -1.35
VCAN-203ENST00000343200 CCT3P49368 545 aaKnown RBP6.59□□□□□ -1.35
VCAN-203ENST00000343200 AARSP49588 968 aaKnown RBP eCLIP6.59□□□□□ -1.35
VCAN-203ENST00000343200 TMPRSS15P98073 1019 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 FAM180AQ6UWF9 173 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 FAM133AQ8N9E0 248 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.59□□□□□ -1.35
VCAN-203ENST00000343200 WDR60Q8WVS4 1066 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 FAM81BQ96LP2 452 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 ZBTB18Q99592 522 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 BBS2Q9BXC9 721 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 ATG2BQ96BY7 2078 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 POTEFA5A3E0 1075 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 HSPD1P10809 573 aaKnown RBP6.59□□□□□ -1.35
VCAN-203ENST00000343200 SLC10A5Q5PT55 438 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 SDE2Q6IQ49 451 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 ANGPTL8Q6UXH0 198 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 PCGF5Q86SE9 256 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 EXOC8Q8IYI6 725 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 PCDHGA3Q9Y5H0 932 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 SOS1Q07889 1333 aaPredicted RBP6.59□□□□□ -1.35
VCAN-203ENST00000343200 THOC2Q8NI27 1593 aaKnown RBP6.59□□□□□ -1.35
VCAN-203ENST00000343200 PODXLO00592 558 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 BAIAP3O94812 1187 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 GCNT3O95395 438 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 VHLP40337 213 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 RUNDC3AQ59EK9 446 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 CREB3L3Q68CJ9 461 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 SULT6B1Q6IMI4 303 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 FGD2Q7Z6J4 655 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 USTQ9Y2C2 406 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 MT-ND3P03897 115 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 JAK1P23458 1154 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 PMS2P54278 862 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 MAGOHP61326 146 aaKnown RBP6.59□□□□□ -1.35
VCAN-203ENST00000343200 PDE4DQ08499 809 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 TAF12Q16514 161 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 UBN2Q6ZU65 1347 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 SH3BP5LQ7L8J4 393 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 KRT77Q7Z794 578 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 MIGA1Q8NAN2 632 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 C19orf18Q8NEA5 215 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 MAGOHBQ96A72 148 aaKnown RBP6.59□□□□□ -1.35
VCAN-203ENST00000343200 CYFIP2Q96F07 1278 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 MNTQ99583 582 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 TRIM51Q9BSJ1 452 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 PIGUQ9H490 435 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 ZBTB21Q9ULJ3 1066 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 CARD8Q9Y2G2 431 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 CDC42BPAQ5VT25 1732 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 PDZK1P1A8MUH7 402 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 ZBTB39O15060 712 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 ZBTB22O15209 634 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 ZMYND10O75800 440 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 PGM1P36871 562 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 DNAL1Q4LDG9 190 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 RHOBTB2Q9BYZ6 727 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 ZFATQ9P243 1243 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 DSEQ9UL01 958 aa6.59□□□□□ -1.35
VCAN-203ENST00000343200 MAGEA13PA6NCF6 341 aa6.59□□□□□ -1.36
VCAN-203ENST00000343200 VWA5AO00534 786 aa6.59□□□□□ -1.36
VCAN-203ENST00000343200 CBFA2T3O75081 653 aa6.59□□□□□ -1.36
VCAN-203ENST00000343200 TSC22D2O75157 780 aa6.59□□□□□ -1.36
VCAN-203ENST00000343200 STARD3NLO95772 234 aa6.59□□□□□ -1.36
VCAN-203ENST00000343200 EFTUD2Q15029 972 aaKnown RBP eCLIP6.59□□□□□ -1.36
VCAN-203ENST00000343200 Q4G0T1 1027 aa6.59□□□□□ -1.36
VCAN-203ENST00000343200 RSRC2Q7L4I2 434 aaKnown RBP6.59□□□□□ -1.36
VCAN-203ENST00000343200 TAGAPQ8N103 731 aa6.59□□□□□ -1.36
VCAN-203ENST00000343200 ELAC2Q9BQ52 826 aaKnown RBP6.59□□□□□ -1.36
VCAN-203ENST00000343200 CABP2Q9NPB3 220 aa6.59□□□□□ -1.36
VCAN-203ENST00000343200 NFU1Q9UMS0 254 aa6.59□□□□□ -1.36
VCAN-203ENST00000343200 FAM200BP0CF97 657 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 TAC1P20366 129 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 ABCB4P21439 1286 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 IGBP1P78318 339 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 ICA1Q05084 483 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 PNOCQ13519 176 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 TSHZ3Q63HK5 1081 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 DHX38Q92620 1227 aaKnown RBP6.58□□□□□ -1.36
VCAN-203ENST00000343200 SKA1Q96BD8 255 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 FBXO28Q9NVF7 368 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 SPATA2Q9UM82 520 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 STON1Q9Y6Q2 735 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 WNK2Q9Y3S1 2297 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 TK2O00142 265 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 GNB5O14775 395 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 DEXIO95424 95 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 FAPQ12884 760 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 FAM45BPQ6NSW5 357 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 CC2D1AQ6P1N0 951 aaPredicted RBP6.58□□□□□ -1.36
VCAN-203ENST00000343200 C3orf20Q8ND61 904 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 ARHGAP45Q92619 1136 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms