RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 SWSAP1Q6NVH7 229 aa19.27■□□□□ 0.68
CLDN4-201ENST00000340958 ARMCX2Q7L311 632 aa19.27■□□□□ 0.68
CLDN4-201ENST00000340958 HPS3Q969F9 1004 aa19.27■□□□□ 0.68
CLDN4-201ENST00000340958 DNAJC19Q96DA6 116 aa19.27■□□□□ 0.68
CLDN4-201ENST00000340958 MCOLN1Q9GZU1 580 aa19.27■□□□□ 0.68
CLDN4-201ENST00000340958 YWHABP31946 246 aaKnown RBP19.26■□□□□ 0.67
CLDN4-201ENST00000340958 STK4Q13043 487 aa19.26■□□□□ 0.67
CLDN4-201ENST00000340958 GRB14Q14449 540 aa19.26■□□□□ 0.67
CLDN4-201ENST00000340958 NCAPHQ15003 741 aa19.26■□□□□ 0.67
CLDN4-201ENST00000340958 ARSHQ5FYA8 562 aa19.26■□□□□ 0.67
CLDN4-201ENST00000340958 RINT1Q6NUQ1 792 aa19.26■□□□□ 0.67
CLDN4-201ENST00000340958 BCAS3Q9H6U6 928 aa19.26■□□□□ 0.67
CLDN4-201ENST00000340958 FANCLQ9NW38 375 aa19.26■□□□□ 0.67
CLDN4-201ENST00000340958 RWDD2AQ9UIY3 292 aa19.26■□□□□ 0.67
CLDN4-201ENST00000340958 SLC15A5A6NIM6 579 aa19.25■□□□□ 0.67
CLDN4-201ENST00000340958 GGPS1O95749 300 aa19.25■□□□□ 0.67
CLDN4-201ENST00000340958 CTGFP29279 349 aa19.25■□□□□ 0.67
CLDN4-201ENST00000340958 GIT2Q14161 759 aa19.25■□□□□ 0.67
CLDN4-201ENST00000340958 LY6KQ17RY6 165 aa19.25■□□□□ 0.67
CLDN4-201ENST00000340958 ADSSL1Q8N142 457 aa19.25■□□□□ 0.67
CLDN4-201ENST00000340958 REEP2Q9BRK0 252 aa19.25■□□□□ 0.67
CLDN4-201ENST00000340958 RUSC1Q9BVN2 902 aa19.25■□□□□ 0.67
CLDN4-201ENST00000340958 TBC1D7Q9P0N9 293 aa19.25■□□□□ 0.67
CLDN4-201ENST00000340958 TRIM17Q9Y577 477 aa19.25■□□□□ 0.67
CLDN4-201ENST00000340958 SERPINC1P01008 464 aa19.25■□□□□ 0.67
CLDN4-201ENST00000340958 TTLL4Q14679 1199 aa19.25■□□□□ 0.67
CLDN4-201ENST00000340958 UGCGQ16739 394 aa19.25■□□□□ 0.67
CLDN4-201ENST00000340958 SPATA1Q5VX52 437 aa19.25■□□□□ 0.67
CLDN4-201ENST00000340958 OTUD6AQ7L8S5 288 aa19.25■□□□□ 0.67
CLDN4-201ENST00000340958 C4orf19Q8IY42 314 aa19.25■□□□□ 0.67
CLDN4-201ENST00000340958 DRC7Q8IY82 874 aa19.25■□□□□ 0.67
CLDN4-201ENST00000340958 TRIM44Q96DX7 344 aaPredicted RBP19.25■□□□□ 0.67
CLDN4-201ENST00000340958 NOP56O00567 594 aaKnown RBP19.24■□□□□ 0.67
CLDN4-201ENST00000340958 AP5Z1O43299 807 aa19.24■□□□□ 0.67
CLDN4-201ENST00000340958 FAM13AO94988 1023 aa19.24■□□□□ 0.67
CLDN4-201ENST00000340958 LYPLA2O95372 231 aa19.24■□□□□ 0.67
CLDN4-201ENST00000340958 PTMAP06454 111 aaKnown RBP19.24■□□□□ 0.67
CLDN4-201ENST00000340958 TXNP10599 105 aaKnown RBP19.24■□□□□ 0.67
CLDN4-201ENST00000340958 HSP90AA4PQ58FG1 418 aa19.24■□□□□ 0.67
CLDN4-201ENST00000340958 FAM26FQ5R3K3 315 aa19.24■□□□□ 0.67
CLDN4-201ENST00000340958 KIAA1217Q5T5P2 1943 aa19.24■□□□□ 0.67
CLDN4-201ENST00000340958 UTP14CQ5TAP6 766 aaKnown RBP19.24■□□□□ 0.67
CLDN4-201ENST00000340958 DOCK3Q8IZD9 2030 aa19.24■□□□□ 0.67
CLDN4-201ENST00000340958 MORC4Q8TE76 937 aa19.24■□□□□ 0.67
CLDN4-201ENST00000340958 DHTKD1Q96HY7 919 aaPredicted RBP19.24■□□□□ 0.67
CLDN4-201ENST00000340958 KCND2Q9NZV8 630 aa19.24■□□□□ 0.67
CLDN4-201ENST00000340958 COL4A3BPQ9Y5P4 624 aa19.24■□□□□ 0.67
CLDN4-201ENST00000340958 PLXNB2O15031 1838 aa19.24■□□□□ 0.67
CLDN4-201ENST00000340958 BICDL2A1A5D9 508 aa19.23■□□□□ 0.67
CLDN4-201ENST00000340958 SUPT20HL2P0C7V6 817 aa19.23■□□□□ 0.67
CLDN4-201ENST00000340958 XKR9Q5GH70 373 aa19.23■□□□□ 0.67
CLDN4-201ENST00000340958 PADI6Q6TGC4 694 aa19.23■□□□□ 0.67
CLDN4-201ENST00000340958 ABHD15Q6UXT9 468 aa19.23■□□□□ 0.67
CLDN4-201ENST00000340958 ZNF467Q7Z7K2 595 aaPredicted RBP19.23■□□□□ 0.67
CLDN4-201ENST00000340958 DHX37Q8IY37 1157 aaKnown RBP19.23■□□□□ 0.67
CLDN4-201ENST00000340958 SCFD2Q8WU76 684 aa19.23■□□□□ 0.67
CLDN4-201ENST00000340958 ZNF302Q9NR11 478 aa19.23■□□□□ 0.67
CLDN4-201ENST00000340958 DDX41Q9UJV9 622 aaKnown RBP19.23■□□□□ 0.67
CLDN4-201ENST00000340958 DBR1Q9UK59 544 aaKnown RBP19.23■□□□□ 0.67
CLDN4-201ENST00000340958 FARP2O94887 1054 aaPredicted RBP19.23■□□□□ 0.67
CLDN4-201ENST00000340958 KIF20AO95235 890 aa19.23■□□□□ 0.67
CLDN4-201ENST00000340958 KIF22Q14807 665 aa19.23■□□□□ 0.67
CLDN4-201ENST00000340958 METTL7BQ6UX53 244 aa19.23■□□□□ 0.67
CLDN4-201ENST00000340958 C1orf186Q6ZWK4 172 aa19.23■□□□□ 0.67
CLDN4-201ENST00000340958 CREBRFQ8IUR6 639 aa19.23■□□□□ 0.67
CLDN4-201ENST00000340958 MYCT1Q8N699 235 aa19.23■□□□□ 0.67
CLDN4-201ENST00000340958 KIAA0895Q8NCT3 520 aa19.23■□□□□ 0.67
CLDN4-201ENST00000340958 TRIM47Q96LD4 638 aa19.23■□□□□ 0.67
CLDN4-201ENST00000340958 PPP1R9BQ96SB3 815 aa19.23■□□□□ 0.67
CLDN4-201ENST00000340958 DIS3Q9Y2L1 958 aaKnown RBP19.23■□□□□ 0.67
CLDN4-201ENST00000340958 ZNFX1Q9P2E3 1918 aaKnown RBP19.22■□□□□ 0.67
CLDN4-201ENST00000340958 PSMC4P43686 418 aa19.22■□□□□ 0.67
CLDN4-201ENST00000340958 ZNF75DP51815 510 aa19.22■□□□□ 0.67
CLDN4-201ENST00000340958 LRRC41Q15345 812 aa19.22■□□□□ 0.67
CLDN4-201ENST00000340958 SARM1Q6SZW1 724 aa19.22■□□□□ 0.67
CLDN4-201ENST00000340958 MAML3Q96JK9 1138 aa19.22■□□□□ 0.67
CLDN4-201ENST00000340958 VTA1Q9NP79 307 aa19.22■□□□□ 0.67
CLDN4-201ENST00000340958 ANKEF1Q9NU02 776 aa19.22■□□□□ 0.67
CLDN4-201ENST00000340958 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.22■□□□□ 0.67
CLDN4-201ENST00000340958 TNPO2O14787 897 aaKnown RBP19.21■□□□□ 0.67
CLDN4-201ENST00000340958 USO1O60763 962 aaKnown RBP19.21■□□□□ 0.67
CLDN4-201ENST00000340958 ARIH2O95376 493 aa19.21■□□□□ 0.67
CLDN4-201ENST00000340958 GAP43P17677 238 aa19.21■□□□□ 0.67
CLDN4-201ENST00000340958 RARRES1P49788 294 aa19.21■□□□□ 0.67
CLDN4-201ENST00000340958 FAM160B1Q5W0V3 765 aa19.21■□□□□ 0.67
CLDN4-201ENST00000340958 PLA2G4FQ68DD2 849 aa19.21■□□□□ 0.67
CLDN4-201ENST00000340958 MAEAQ7L5Y9 396 aa19.21■□□□□ 0.67
CLDN4-201ENST00000340958 CCDC60Q8IWA6 550 aaPredicted RBP19.21■□□□□ 0.67
CLDN4-201ENST00000340958 MYOCDQ8IZQ8 938 aa19.21■□□□□ 0.67
CLDN4-201ENST00000340958 SEPT1Q8WYJ6 367 aa19.21■□□□□ 0.67
CLDN4-201ENST00000340958 P2RX5Q93086 422 aa19.21■□□□□ 0.67
CLDN4-201ENST00000340958 CEP170P1Q96L14 293 aa19.21■□□□□ 0.67
CLDN4-201ENST00000340958 SPATA33Q96N06 139 aa19.21■□□□□ 0.67
CLDN4-201ENST00000340958 SH2D3AQ9BRG2 576 aa19.21■□□□□ 0.67
CLDN4-201ENST00000340958 AZI2Q9H6S1 392 aa19.21■□□□□ 0.67
CLDN4-201ENST00000340958 MRPL44Q9H9J2 332 aaKnown RBP19.21■□□□□ 0.67
CLDN4-201ENST00000340958 POLD4Q9HCU8 107 aa19.21■□□□□ 0.67
CLDN4-201ENST00000340958 PDGFCQ9NRA1 345 aa19.21■□□□□ 0.67
CLDN4-201ENST00000340958 SAMSN1Q9NSI8 373 aaKnown RBP19.21■□□□□ 0.67
CLDN4-201ENST00000340958 SEPT9Q9UHD8 586 aaPredicted RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms