RNA–Protein interactions for RNA: ENST00000338458.8

ARHGEF3-202, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-202ENST00000338458 FAM178BQ8IXR5 827 aa11.14□□□□□ -0.63
ARHGEF3-202ENST00000338458 KIF18AQ8NI77 898 aa11.14□□□□□ -0.63
ARHGEF3-202ENST00000338458 NSUN6Q8TEA1 469 aaKnown RBP11.14□□□□□ -0.63
ARHGEF3-202ENST00000338458 KCTD10Q9H3F6 313 aa11.14□□□□□ -0.63
ARHGEF3-202ENST00000338458 FAM170AA1A519 330 aa11.14□□□□□ -0.63
ARHGEF3-202ENST00000338458 RASSF10A6NK89 507 aa11.14□□□□□ -0.63
ARHGEF3-202ENST00000338458 P4HBP07237 508 aaKnown RBP11.14□□□□□ -0.63
ARHGEF3-202ENST00000338458 KNOP1Q1ED39 458 aaKnown RBP11.14□□□□□ -0.63
ARHGEF3-202ENST00000338458 ZCWPW2Q504Y3 356 aa11.14□□□□□ -0.63
ARHGEF3-202ENST00000338458 VSIG10LQ86VR7 867 aa11.14□□□□□ -0.63
ARHGEF3-202ENST00000338458 MYRIPQ8NFW9 859 aa11.14□□□□□ -0.63
ARHGEF3-202ENST00000338458 PRIMPOLQ96LW4 560 aa11.14□□□□□ -0.63
ARHGEF3-202ENST00000338458 GTPBP4Q9BZE4 634 aaKnown RBP11.14□□□□□ -0.63
ARHGEF3-202ENST00000338458 ZSWIM4Q9H7M6 989 aa11.14□□□□□ -0.63
ARHGEF3-202ENST00000338458 PARVGQ9HBI0 331 aa11.14□□□□□ -0.63
ARHGEF3-202ENST00000338458 ITIH6Q6UXX5 1313 aa11.14□□□□□ -0.63
ARHGEF3-202ENST00000338458 DICER1Q9UPY3 1922 aaKnown RBP11.14□□□□□ -0.63
ARHGEF3-202ENST00000338458 CETN3O15182 167 aa11.14□□□□□ -0.63
ARHGEF3-202ENST00000338458 QARSP47897 775 aaKnown RBP11.14□□□□□ -0.63
ARHGEF3-202ENST00000338458 XKR9Q5GH70 373 aa11.14□□□□□ -0.63
ARHGEF3-202ENST00000338458 NOL9Q5SY16 702 aaKnown RBP11.14□□□□□ -0.63
ARHGEF3-202ENST00000338458 OR8K1Q8NGG5 319 aa11.14□□□□□ -0.63
ARHGEF3-202ENST00000338458 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.14□□□□□ -0.63
ARHGEF3-202ENST00000338458 STK24Q9Y6E0 443 aa11.14□□□□□ -0.63
ARHGEF3-202ENST00000338458 PHIPQ8WWQ0 1821 aa11.13□□□□□ -0.63
ARHGEF3-202ENST00000338458 FRMD3A2A2Y4 597 aa11.13□□□□□ -0.63
ARHGEF3-202ENST00000338458 RGS20O76081 388 aa11.13□□□□□ -0.63
ARHGEF3-202ENST00000338458 PGK2P07205 417 aa11.13□□□□□ -0.63
ARHGEF3-202ENST00000338458 CCDC175P0C221 793 aa11.13□□□□□ -0.63
ARHGEF3-202ENST00000338458 ARID5AQ03989 594 aa11.13□□□□□ -0.63
ARHGEF3-202ENST00000338458 COBLL1Q53SF7 1204 aa11.13□□□□□ -0.63
ARHGEF3-202ENST00000338458 RBM46Q8TBY0 533 aaKnown RBP11.13□□□□□ -0.63
ARHGEF3-202ENST00000338458 OPTNQ96CV9 577 aa11.13□□□□□ -0.63
ARHGEF3-202ENST00000338458 TISP43B9A030 160 aa11.13□□□□□ -0.63
ARHGEF3-202ENST00000338458 KIF20AO95235 890 aa11.13□□□□□ -0.63
ARHGEF3-202ENST00000338458 FDX1P10109 184 aa11.13□□□□□ -0.63
ARHGEF3-202ENST00000338458 YWHABP31946 246 aaKnown RBP11.13□□□□□ -0.63
ARHGEF3-202ENST00000338458 CYP2J2P51589 502 aa11.13□□□□□ -0.63
ARHGEF3-202ENST00000338458 ANKRD13AQ8IZ07 590 aa11.13□□□□□ -0.63
ARHGEF3-202ENST00000338458 SYCP3Q8IZU3 236 aa11.13□□□□□ -0.63
ARHGEF3-202ENST00000338458 GABBR1Q9UBS5 961 aa11.13□□□□□ -0.63
ARHGEF3-202ENST00000338458 ADGRG1Q9Y653 693 aa11.13□□□□□ -0.63
ARHGEF3-202ENST00000338458 BACH1O14867 736 aa11.13□□□□□ -0.63
ARHGEF3-202ENST00000338458 URI1O94763 535 aaPredicted RBP11.13□□□□□ -0.63
ARHGEF3-202ENST00000338458 PLEKP08567 350 aaPredicted RBP11.13□□□□□ -0.63
ARHGEF3-202ENST00000338458 BCRP11274 1271 aa11.13□□□□□ -0.63
ARHGEF3-202ENST00000338458 SWSAP1Q6NVH7 229 aa11.13□□□□□ -0.63
ARHGEF3-202ENST00000338458 B3GNT9Q6UX72 402 aa11.13□□□□□ -0.63
ARHGEF3-202ENST00000338458 WDR24Q96S15 920 aa11.13□□□□□ -0.63
ARHGEF3-202ENST00000338458 TBC1D22BQ9NU19 505 aa11.13□□□□□ -0.63
ARHGEF3-202ENST00000338458 ADAMTS5Q9UNA0 930 aa11.13□□□□□ -0.63
ARHGEF3-202ENST00000338458 A0A1W2PQC6 194 aa11.12□□□□□ -0.63
ARHGEF3-202ENST00000338458 K7ENM7 598 aa11.12□□□□□ -0.63
ARHGEF3-202ENST00000338458 FAM102BQ5T8I3 360 aa11.12□□□□□ -0.63
ARHGEF3-202ENST00000338458 CYP26C1Q6V0L0 522 aa11.12□□□□□ -0.63
ARHGEF3-202ENST00000338458 RRAGAQ7L523 313 aa11.12□□□□□ -0.63
ARHGEF3-202ENST00000338458 CACNA2D4Q7Z3S7 1137 aa11.12□□□□□ -0.63
ARHGEF3-202ENST00000338458 KIFC3Q9BVG8 833 aa11.12□□□□□ -0.63
ARHGEF3-202ENST00000338458 ASCC2Q9H1I8 757 aaPredicted RBP11.12□□□□□ -0.63
ARHGEF3-202ENST00000338458 PCIF1Q9H4Z3 704 aa11.12□□□□□ -0.63
ARHGEF3-202ENST00000338458 TRIM10Q9UDY6 481 aa11.12□□□□□ -0.63
ARHGEF3-202ENST00000338458 FANCGO15287 622 aa11.12□□□□□ -0.63
ARHGEF3-202ENST00000338458 NR3C1P04150 777 aa11.12□□□□□ -0.63
ARHGEF3-202ENST00000338458 RARRES1P49788 294 aa11.12□□□□□ -0.63
ARHGEF3-202ENST00000338458 ETF1P62495 437 aaKnown RBP11.12□□□□□ -0.63
ARHGEF3-202ENST00000338458 CYP27A1Q02318 531 aa11.12□□□□□ -0.63
ARHGEF3-202ENST00000338458 TRIM14Q14142 442 aa11.12□□□□□ -0.63
ARHGEF3-202ENST00000338458 CYFIP1Q7L576 1253 aa11.12□□□□□ -0.63
ARHGEF3-202ENST00000338458 ERO1BQ86YB8 467 aa11.12□□□□□ -0.63
ARHGEF3-202ENST00000338458 CAPN11Q9UMQ6 739 aa11.12□□□□□ -0.63
ARHGEF3-202ENST00000338458 AKAP3O75969 853 aa11.11□□□□□ -0.63
ARHGEF3-202ENST00000338458 ARHGAP29Q52LW3 1261 aa11.11□□□□□ -0.63
ARHGEF3-202ENST00000338458 WDR59Q6PJI9 974 aa11.11□□□□□ -0.63
ARHGEF3-202ENST00000338458 TMTC1Q8IUR5 882 aa11.11□□□□□ -0.63
ARHGEF3-202ENST00000338458 DAW1Q8N136 415 aa11.11□□□□□ -0.63
ARHGEF3-202ENST00000338458 LSM14BQ9BX40 385 aaKnown RBP11.11□□□□□ -0.63
ARHGEF3-202ENST00000338458 TXNRD2Q9NNW7 524 aa11.11□□□□□ -0.63
ARHGEF3-202ENST00000338458 DOCK5Q9H7D0 1870 aa11.11□□□□□ -0.63
ARHGEF3-202ENST00000338458 ASTN1O14525 1302 aa11.11□□□□□ -0.63
ARHGEF3-202ENST00000338458 WDR64B1ANS9 1081 aa11.11□□□□□ -0.63
ARHGEF3-202ENST00000338458 CCP110O43303 1012 aa11.11□□□□□ -0.63
ARHGEF3-202ENST00000338458 CYP2C8P10632 490 aa11.11□□□□□ -0.63
ARHGEF3-202ENST00000338458 ACTN1P12814 892 aa11.11□□□□□ -0.63
ARHGEF3-202ENST00000338458 SP2Q02086 613 aa11.11□□□□□ -0.63
ARHGEF3-202ENST00000338458 Q3C1V9 767 aa11.11□□□□□ -0.63
ARHGEF3-202ENST00000338458 TRIM65Q6PJ69 517 aa11.11□□□□□ -0.63
ARHGEF3-202ENST00000338458 LBX2Q6XYB7 198 aa11.11□□□□□ -0.63
ARHGEF3-202ENST00000338458 TAF1DQ9H5J8 278 aaPredicted RBP11.11□□□□□ -0.63
ARHGEF3-202ENST00000338458 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.11□□□□□ -0.632e-6■■■■■ 149.1
ARHGEF3-202ENST00000338458 ZNHIT6Q9NWK9 470 aaKnown RBP11.11□□□□□ -0.63
ARHGEF3-202ENST00000338458 PAXBP1Q9Y5B6 917 aa11.11□□□□□ -0.63
ARHGEF3-202ENST00000338458 RLFQ13129 1914 aa11.11□□□□□ -0.63
ARHGEF3-202ENST00000338458 FRMPD4Q14CM0 1322 aa11.11□□□□□ -0.63
ARHGEF3-202ENST00000338458 GLTPD2A6NH11 291 aa11.11□□□□□ -0.63
ARHGEF3-202ENST00000338458 CCDC169A6NNP5 214 aa11.11□□□□□ -0.63
ARHGEF3-202ENST00000338458 CALUO43852 315 aaPredicted RBP11.11□□□□□ -0.63
ARHGEF3-202ENST00000338458 PEX3P56589 373 aa11.11□□□□□ -0.63
ARHGEF3-202ENST00000338458 HERVK_113P62684 666 aa11.11□□□□□ -0.63
ARHGEF3-202ENST00000338458 KCNMA1Q12791 1236 aa11.11□□□□□ -0.63
ARHGEF3-202ENST00000338458 KCNH2Q12809 1159 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms