RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 MMP10P09238 476 aa18.45■□□□□ 0.54
TRAPPC11-201ENST00000334690 SNCBQ16143 134 aa18.45■□□□□ 0.54
TRAPPC11-201ENST00000334690 TRIM42Q8IWZ5 723 aa18.45■□□□□ 0.54
TRAPPC11-201ENST00000334690 DCPSQ96C86 337 aaKnown RBP18.45■□□□□ 0.54
TRAPPC11-201ENST00000334690 MED10Q9BTT4 135 aa18.45■□□□□ 0.54
TRAPPC11-201ENST00000334690 ZMYND12Q9H0C1 365 aa18.45■□□□□ 0.54
TRAPPC11-201ENST00000334690 TACC3Q9Y6A5 838 aa18.45■□□□□ 0.54
TRAPPC11-201ENST00000334690 MCF2LO15068 1137 aa18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 MUM1Q2TAK8 710 aa18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 PDXDC2PQ6P474 469 aa18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 RFX6Q8HWS3 928 aa18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 SRBD1Q8N5C6 995 aaKnown RBP18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 MICAL1Q8TDZ2 1067 aa18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 LIMA1Q9UHB6 759 aaKnown RBP18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 POLR1AO95602 1720 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 A0A1B0GTH6 734 aa18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 PP2D1A8MPX8 630 aa18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 GOLGA8SH3BPF8 625 aa18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 KRT1P04264 644 aa18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 RFX5P48382 616 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 CCNA1P78396 465 aa18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 ADCY2Q08462 1091 aa18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 MTERF2Q49AM1 385 aa18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 NSUN4Q96CB9 384 aaKnown RBP18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 IL25Q9H293 177 aa18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 CAPN11Q9UMQ6 739 aa18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 MRFAP1Q9Y605 127 aa18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 CPS1P31327 1500 aa18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 ARHGAP42A6NI28 874 aa18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 JAK3P52333 1124 aa18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 PEX3P56589 373 aa18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 PSMD6Q15008 389 aa18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 MCPH1Q8NEM0 835 aa18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 PFDN4Q9NQP4 134 aa18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 KIAA1210Q9ULL0 1709 aa18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 POTEB3A0JP26 581 aa18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 POTECB2RU33 542 aa18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 USP17L10C9JJH3 530 aa18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 SRGAP2O75044 1071 aa18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 GARSP41250 739 aaKnown RBP18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 USP11P51784 963 aa18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 NAA30Q147X3 362 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 LLGL1Q15334 1064 aa18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 POTEBQ6S5H4 581 aa18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 TAB3Q8N5C8 712 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 SCINQ9Y6U3 715 aa18.44■□□□□ 0.54
TRAPPC11-201ENST00000334690 SFI1A8K8P3 1242 aa18.43■□□□□ 0.54
TRAPPC11-201ENST00000334690 PDIA5Q14554 519 aa18.43■□□□□ 0.54
TRAPPC11-201ENST00000334690 E4F1Q66K89 784 aaPredicted RBP18.43■□□□□ 0.54
TRAPPC11-201ENST00000334690 DPY19L2Q6NUT2 758 aa18.43■□□□□ 0.54
TRAPPC11-201ENST00000334690 PHF20Q9BVI0 1012 aa18.43■□□□□ 0.54
TRAPPC11-201ENST00000334690 TXNDC9O14530 226 aa18.43■□□□□ 0.54
TRAPPC11-201ENST00000334690 PRELPP51888 382 aa18.43■□□□□ 0.54
TRAPPC11-201ENST00000334690 IGBP1P78318 339 aa18.43■□□□□ 0.54
TRAPPC11-201ENST00000334690 CCZ1BP86790 482 aa18.43■□□□□ 0.54
TRAPPC11-201ENST00000334690 CCZ1P86791 482 aaPredicted RBP18.43■□□□□ 0.54
TRAPPC11-201ENST00000334690 SBK1Q52WX2 424 aa18.43■□□□□ 0.54
TRAPPC11-201ENST00000334690 DPF2Q92785 391 aa18.43■□□□□ 0.54
TRAPPC11-201ENST00000334690 TRIM9Q9C026 710 aa18.43■□□□□ 0.54
TRAPPC11-201ENST00000334690 KCNF1Q9H3M0 494 aa18.43■□□□□ 0.54
TRAPPC11-201ENST00000334690 ACTR5Q9H9F9 607 aaPredicted RBP18.43■□□□□ 0.54
TRAPPC11-201ENST00000334690 CD2APQ9Y5K6 639 aa18.43■□□□□ 0.54
TRAPPC11-201ENST00000334690 NME8Q8N427 588 aa18.43■□□□□ 0.54
TRAPPC11-201ENST00000334690 KIAA1586Q9HCI6 787 aa18.43■□□□□ 0.54
TRAPPC11-201ENST00000334690 LDHAP00338 332 aaKnown RBP18.42■□□□□ 0.54
TRAPPC11-201ENST00000334690 PDE1BQ01064 536 aa18.42■□□□□ 0.54
TRAPPC11-201ENST00000334690 SF3B3Q15393 1217 aaKnown RBP18.42■□□□□ 0.54
TRAPPC11-201ENST00000334690 ZKSCAN8Q15776 578 aaPredicted RBP18.42■□□□□ 0.54
TRAPPC11-201ENST00000334690 QRICH1Q2TAL8 776 aa18.42■□□□□ 0.54
TRAPPC11-201ENST00000334690 RTKN2Q8IZC4 609 aa18.42■□□□□ 0.54
TRAPPC11-201ENST00000334690 OSBPL9Q96SU4 736 aa18.42■□□□□ 0.54
TRAPPC11-201ENST00000334690 TBC1D22BQ9NU19 505 aa18.42■□□□□ 0.54
TRAPPC11-201ENST00000334690 LRRD1A4D1F6 860 aa18.42■□□□□ 0.54
TRAPPC11-201ENST00000334690 TADA3O75528 432 aa18.42■□□□□ 0.54
TRAPPC11-201ENST00000334690 SEPT14Q6ZU15 432 aa18.42■□□□□ 0.54
TRAPPC11-201ENST00000334690 ZNF34Q8IZ26 560 aa18.42■□□□□ 0.54
TRAPPC11-201ENST00000334690 NCOA3Q9Y6Q9 1424 aa18.42■□□□□ 0.54
TRAPPC11-201ENST00000334690 MSH2P43246 934 aa18.42■□□□□ 0.54
TRAPPC11-201ENST00000334690 SLCO1A2P46721 670 aa18.42■□□□□ 0.54
TRAPPC11-201ENST00000334690 SEPT12Q8IYM1 358 aa18.42■□□□□ 0.54
TRAPPC11-201ENST00000334690 KLHL29Q96CT2 875 aa18.42■□□□□ 0.54
TRAPPC11-201ENST00000334690 TMEM260Q9NX78 707 aa18.42■□□□□ 0.54
TRAPPC11-201ENST00000334690 MORC2Q9Y6X9 1032 aaPredicted RBP18.42■□□□□ 0.54
TRAPPC11-201ENST00000334690 F5H6K3 240 aa18.42■□□□□ 0.54
TRAPPC11-201ENST00000334690 ANTXR2P58335 489 aa18.42■□□□□ 0.54
TRAPPC11-201ENST00000334690 KLRC3Q07444 240 aa18.42■□□□□ 0.54
TRAPPC11-201ENST00000334690 CFAP61Q8NHU2 1237 aa18.42■□□□□ 0.54
TRAPPC11-201ENST00000334690 NXF1Q9UBU9 619 aaKnown RBP18.42■□□□□ 0.54
TRAPPC11-201ENST00000334690 SUGT1Q9Y2Z0 365 aa18.42■□□□□ 0.54
TRAPPC11-201ENST00000334690 MYO3BQ8WXR4 1341 aa18.42■□□□□ 0.54
TRAPPC11-201ENST00000334690 CACNB3P54284 484 aa18.41■□□□□ 0.54
TRAPPC11-201ENST00000334690 HNRNPH2P55795 449 aaKnown RBP18.41■□□□□ 0.54
TRAPPC11-201ENST00000334690 MIGA2Q7L4E1 593 aa18.41■□□□□ 0.54
TRAPPC11-201ENST00000334690 ARHGEF1Q92888 912 aaKnown RBP18.41■□□□□ 0.54
TRAPPC11-201ENST00000334690 FAM149B1Q96BN6 582 aa18.41■□□□□ 0.54
TRAPPC11-201ENST00000334690 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC11-201ENST00000334690 INO80Q9ULG1 1556 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC11-201ENST00000334690 CHGBP05060 677 aa18.41■□□□□ 0.54
TRAPPC11-201ENST00000334690 FDPSP14324 419 aaKnown RBP18.41■□□□□ 0.54
TRAPPC11-201ENST00000334690 GFPT1Q06210 699 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms