RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 TIMM22Q9Y584 194 aa11.22□□□□□ -0.61
SF3B2-201ENST00000322535 EPN1Q9Y6I3 576 aaPredicted RBP11.22□□□□□ -0.61
SF3B2-201ENST00000322535 TRIM43BA6NCK2 446 aa11.22□□□□□ -0.61
SF3B2-201ENST00000322535 EPB41P11171 864 aaKnown RBP11.22□□□□□ -0.61
SF3B2-201ENST00000322535 PTK7Q13308 1070 aa11.22□□□□□ -0.61
SF3B2-201ENST00000322535 ZNF362Q5T0B9 420 aaPredicted RBP11.22□□□□□ -0.61
SF3B2-201ENST00000322535 CHADLQ6NUI6 762 aa11.22□□□□□ -0.61
SF3B2-201ENST00000322535 CCDC155Q8N6L0 562 aa11.22□□□□□ -0.61
SF3B2-201ENST00000322535 MED15Q96RN5 788 aa11.22□□□□□ -0.61
SF3B2-201ENST00000322535 LLPHQ9BRT6 129 aaKnown RBP11.22□□□□□ -0.61
SF3B2-201ENST00000322535 OSBPL10Q9BXB5 764 aa11.22□□□□□ -0.61
SF3B2-201ENST00000322535 NACAP1Q9BZK3 213 aa11.22□□□□□ -0.61
SF3B2-201ENST00000322535 POLR3EQ9NVU0 708 aa11.22□□□□□ -0.61
SF3B2-201ENST00000322535 A0A1B0GUL6 1792 aa11.21□□□□□ -0.61
SF3B2-201ENST00000322535 A0A1B0GTH6 734 aa11.21□□□□□ -0.61
SF3B2-201ENST00000322535 hCG_1642624A0A1W2PR95 340 aa11.21□□□□□ -0.61
SF3B2-201ENST00000322535 GOLGA8BA8MQT2 603 aa11.21□□□□□ -0.61
SF3B2-201ENST00000322535 FDPSP14324 419 aaKnown RBP11.21□□□□□ -0.61
SF3B2-201ENST00000322535 PDIA3P30101 505 aaKnown RBP11.21□□□□□ -0.61
SF3B2-201ENST00000322535 PHEXP78562 749 aa11.21□□□□□ -0.61
SF3B2-201ENST00000322535 DMPKQ09013 629 aa11.21□□□□□ -0.61
SF3B2-201ENST00000322535 MAP7D1Q3KQU3 841 aa11.21□□□□□ -0.61
SF3B2-201ENST00000322535 ANKRD20A2Q5SQ80 823 aa11.21□□□□□ -0.61
SF3B2-201ENST00000322535 ANKRD20A1Q5TYW2 823 aa11.21□□□□□ -0.61
SF3B2-201ENST00000322535 ANKRD20A3Q5VUR7 823 aa11.21□□□□□ -0.61
SF3B2-201ENST00000322535 KIF2BQ8N4N8 673 aa11.21□□□□□ -0.61
SF3B2-201ENST00000322535 ATP6V1G3Q96LB4 118 aa11.21□□□□□ -0.61
SF3B2-201ENST00000322535 AIFM3Q96NN9 605 aa11.21□□□□□ -0.61
SF3B2-201ENST00000322535 ZNF277Q9NRM2 450 aaPredicted RBP11.21□□□□□ -0.61
SF3B2-201ENST00000322535 ABHD10Q9NUJ1 306 aa11.21□□□□□ -0.61
SF3B2-201ENST00000322535 SLX4Q8IY92 1834 aa11.21□□□□□ -0.61
SF3B2-201ENST00000322535 ZMYM6O95789 1325 aa11.21□□□□□ -0.62
SF3B2-201ENST00000322535 IFIT3O14879 490 aaKnown RBP11.21□□□□□ -0.62
SF3B2-201ENST00000322535 ATP9BO43861 1147 aa11.21□□□□□ -0.62
SF3B2-201ENST00000322535 NDUFA10O95299 355 aa11.21□□□□□ -0.62
SF3B2-201ENST00000322535 CASP1P29466 404 aa11.21□□□□□ -0.62
SF3B2-201ENST00000322535 BTDP43251 543 aa11.21□□□□□ -0.62
SF3B2-201ENST00000322535 CARSP49589 748 aaKnown RBP11.21□□□□□ -0.62
SF3B2-201ENST00000322535 VAV2P52735 878 aa11.21□□□□□ -0.62
SF3B2-201ENST00000322535 KCNJ2P63252 427 aa11.21□□□□□ -0.62
SF3B2-201ENST00000322535 CLPPQ16740 277 aaPredicted RBP11.21□□□□□ -0.62
SF3B2-201ENST00000322535 IQCEQ6IPM2 695 aa11.21□□□□□ -0.62
SF3B2-201ENST00000322535 LONP2Q86WA8 852 aa11.21□□□□□ -0.62
SF3B2-201ENST00000322535 PHKBQ93100 1093 aa11.21□□□□□ -0.62
SF3B2-201ENST00000322535 DCP1AQ9NPI6 582 aaPredicted RBP11.21□□□□□ -0.62
SF3B2-201ENST00000322535 REXO2Q9Y3B8 237 aaKnown RBP11.21□□□□□ -0.62
SF3B2-201ENST00000322535 PENKP01210 267 aaPredicted RBP11.2□□□□□ -0.62
SF3B2-201ENST00000322535 PLCD1P51178 756 aa11.2□□□□□ -0.62
SF3B2-201ENST00000322535 FOXB2Q5VYV0 432 aa11.2□□□□□ -0.62
SF3B2-201ENST00000322535 ERMNQ8TAM6 284 aa11.2□□□□□ -0.62
SF3B2-201ENST00000322535 WDR66Q8TBY9 1149 aa11.2□□□□□ -0.62
SF3B2-201ENST00000322535 NACC2Q96BF6 587 aa11.2□□□□□ -0.62
SF3B2-201ENST00000322535 NR1H4Q96RI1 486 aaPredicted RBP11.2□□□□□ -0.62
SF3B2-201ENST00000322535 LAMA4Q16363 1823 aa11.2□□□□□ -0.62
SF3B2-201ENST00000322535 LUC7L3O95232 432 aaKnown RBP11.2□□□□□ -0.62
SF3B2-201ENST00000322535 RNASE9P60153 205 aaKnown RBP11.2□□□□□ -0.62
SF3B2-201ENST00000322535 CYP27A1Q02318 531 aa11.2□□□□□ -0.62
SF3B2-201ENST00000322535 TMEM67Q5HYA8 995 aa11.2□□□□□ -0.62
SF3B2-201ENST00000322535 C8orf74Q6P047 294 aa11.2□□□□□ -0.62
SF3B2-201ENST00000322535 CCT6BQ92526 530 aa11.2□□□□□ -0.62
SF3B2-201ENST00000322535 RPGRIP1Q96KN7 1286 aa11.2□□□□□ -0.62
SF3B2-201ENST00000322535 IWS1Q96ST2 819 aa11.2□□□□□ -0.62
SF3B2-201ENST00000322535 PPP1R12CQ9BZL4 782 aa11.2□□□□□ -0.62
SF3B2-201ENST00000322535 STIM2Q9P246 746 aa11.2□□□□□ -0.62
SF3B2-201ENST00000322535 ARAP2Q8WZ64 1704 aa11.2□□□□□ -0.62
SF3B2-201ENST00000322535 TMEM247A6NEH6 219 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 PSMD14O00487 310 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 CPLX1O14810 134 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 P4HA2O15460 535 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 POLR2DO15514 142 aaKnown RBP11.19□□□□□ -0.62
SF3B2-201ENST00000322535 HNRNPRO43390 633 aaKnown RBP11.19□□□□□ -0.62
SF3B2-201ENST00000322535 AKR1B10O60218 316 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 RAD17O75943 681 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 RFC5P40937 340 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 PSMC4P43686 418 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 GUCY2DQ02846 1103 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 TCP10Q12799 353 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 ITGB3BPQ13352 177 aaPredicted RBP11.19□□□□□ -0.62
SF3B2-201ENST00000322535 RCN1Q15293 331 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 ENOX1Q8TC92 643 aaKnown RBP11.19□□□□□ -0.62
SF3B2-201ENST00000322535 KIFAP3Q92845 792 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 NAF1Q96HR8 494 aaKnown RBP11.19□□□□□ -0.62
SF3B2-201ENST00000322535 RPS6KC1Q96S38 1066 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 PLAAQ9Y263 795 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 DNAJC8O75937 253 aaPredicted RBP11.19□□□□□ -0.62
SF3B2-201ENST00000322535 TMCC1O94876 653 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 COL11A2P13942 1736 aaPredicted RBP11.19□□□□□ -0.62
SF3B2-201ENST00000322535 NFKBIAP25963 317 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 AFMP43652 599 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 USP11P51784 963 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 BYSLQ13895 437 aaKnown RBP11.19□□□□□ -0.62
SF3B2-201ENST00000322535 TMEM53Q6P2H8 277 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 EMBQ6PCB8 327 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 ARHGAP18Q8N392 663 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 SNRNP27Q8WVK2 155 aaKnown RBP11.19□□□□□ -0.62
SF3B2-201ENST00000322535 HPS3Q969F9 1004 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 RNF25Q96BH1 459 aaPredicted RBP11.19□□□□□ -0.62
SF3B2-201ENST00000322535 MOV10L1Q9BXT6 1211 aaKnown RBP11.19□□□□□ -0.62
SF3B2-201ENST00000322535 LACRTQ9GZZ8 138 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 EPB41L5Q9HCM4 733 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms