RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 CCDC88AQ3V6T2 1871 aa19.3■□□□□ 0.68
CDKN1B-201ENST00000228872 A0A087X0T9 212 aa19.3■□□□□ 0.68
CDKN1B-201ENST00000228872 MMP10P09238 476 aa19.3■□□□□ 0.68
CDKN1B-201ENST00000228872 FAM228BP0C875 321 aa19.3■□□□□ 0.68
CDKN1B-201ENST00000228872 PCP11498 1178 aaKnown RBP19.3■□□□□ 0.68
CDKN1B-201ENST00000228872 ITIH4Q14624 930 aa19.3■□□□□ 0.68
CDKN1B-201ENST00000228872 BZW1Q7L1Q6 419 aaKnown RBP19.3■□□□□ 0.68
CDKN1B-201ENST00000228872 PNMA8AQ86V59 439 aaPredicted RBP19.3■□□□□ 0.68
CDKN1B-201ENST00000228872 ZNF483Q8TF39 744 aaPredicted RBP19.3■□□□□ 0.68
CDKN1B-201ENST00000228872 RIOK1Q9BRS2 568 aaKnown RBP19.3■□□□□ 0.68
CDKN1B-201ENST00000228872 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.3■□□□□ 0.68
CDKN1B-201ENST00000228872 DDX47Q9H0S4 455 aaKnown RBP19.3■□□□□ 0.68
CDKN1B-201ENST00000228872 STK32BQ9NY57 414 aa19.3■□□□□ 0.68
CDKN1B-201ENST00000228872 TRPC6Q9Y210 931 aa19.3■□□□□ 0.68
CDKN1B-201ENST00000228872 L3MBTL1Q9Y468 752 aa19.3■□□□□ 0.68
CDKN1B-201ENST00000228872 USP11P51784 963 aa19.3■□□□□ 0.68
CDKN1B-201ENST00000228872 SPDL1Q96EA4 605 aa19.3■□□□□ 0.68
CDKN1B-201ENST00000228872 ANKIB1Q9P2G1 1089 aa19.3■□□□□ 0.68
CDKN1B-201ENST00000228872 CFAP73A6NFT4 308 aa19.29■□□□□ 0.68
CDKN1B-201ENST00000228872 KCTD19Q17RG1 926 aaPredicted RBP19.29■□□□□ 0.68
CDKN1B-201ENST00000228872 CDCA2Q69YH5 1023 aaPredicted RBP19.29■□□□□ 0.68
CDKN1B-201ENST00000228872 CHADLQ6NUI6 762 aa19.29■□□□□ 0.68
CDKN1B-201ENST00000228872 TBC1D1Q86TI0 1168 aaPredicted RBP19.29■□□□□ 0.68
CDKN1B-201ENST00000228872 L3MBTL3Q96JM7 780 aaPredicted RBP19.29■□□□□ 0.68
CDKN1B-201ENST00000228872 PNMA2Q9UL42 364 aa19.29■□□□□ 0.68
CDKN1B-201ENST00000228872 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.29■□□□□ 0.68
CDKN1B-201ENST00000228872 ASAP2O43150 1006 aa19.29■□□□□ 0.68
CDKN1B-201ENST00000228872 LRRC63Q05C16 580 aa19.29■□□□□ 0.68
CDKN1B-201ENST00000228872 DHX9Q08211 1270 aaKnown RBP19.29■□□□□ 0.68
CDKN1B-201ENST00000228872 FAM47AQ5JRC9 791 aa19.29■□□□□ 0.68
CDKN1B-201ENST00000228872 PIGWQ7Z7B1 504 aa19.29■□□□□ 0.68
CDKN1B-201ENST00000228872 GUF1Q8N442 669 aaKnown RBP19.29■□□□□ 0.68
CDKN1B-201ENST00000228872 LSM14BQ9BX40 385 aaKnown RBP19.29■□□□□ 0.68
CDKN1B-201ENST00000228872 NOC2LQ9Y3T9 749 aaKnown RBP19.29■□□□□ 0.68
CDKN1B-201ENST00000228872 PGRMC1O00264 195 aaKnown RBP19.28■□□□□ 0.68
CDKN1B-201ENST00000228872 OR52Z1P0C646 297 aa19.28■□□□□ 0.68
CDKN1B-201ENST00000228872 POLR2FP61218 127 aaKnown RBP19.28■□□□□ 0.68
CDKN1B-201ENST00000228872 DYNLL1P63167 89 aaKnown RBP19.28■□□□□ 0.68
CDKN1B-201ENST00000228872 AGAP11Q8TF27 550 aa19.28■□□□□ 0.68
CDKN1B-201ENST00000228872 SPAG5Q96R06 1193 aa19.28■□□□□ 0.68
CDKN1B-201ENST00000228872 CHN1P15882 459 aa19.28■□□□□ 0.68
CDKN1B-201ENST00000228872 PDE6BP35913 854 aa19.28■□□□□ 0.68
CDKN1B-201ENST00000228872 SARNPP82979 210 aaKnown RBP19.28■□□□□ 0.68
CDKN1B-201ENST00000228872 EVX2Q03828 476 aa19.28■□□□□ 0.68
CDKN1B-201ENST00000228872 GOLPH3Q9H4A6 298 aa19.28■□□□□ 0.68
CDKN1B-201ENST00000228872 ADAMTS1Q9UHI8 967 aa19.28■□□□□ 0.68
CDKN1B-201ENST00000228872 AMACRQ9UHK6 382 aa19.28■□□□□ 0.68
CDKN1B-201ENST00000228872 MMEP08473 750 aa19.28■□□□□ 0.68
CDKN1B-201ENST00000228872 ZBTB48P10074 688 aaPredicted RBP19.28■□□□□ 0.68
CDKN1B-201ENST00000228872 ATP2B4P23634 1241 aa19.28■□□□□ 0.68
CDKN1B-201ENST00000228872 KIF5BP33176 963 aa19.28■□□□□ 0.68
CDKN1B-201ENST00000228872 BAG6P46379 1132 aa19.28■□□□□ 0.68
CDKN1B-201ENST00000228872 GPSM2P81274 684 aa19.28■□□□□ 0.68
CDKN1B-201ENST00000228872 SF3A3Q12874 501 aaKnown RBP eCLIP19.28■□□□□ 0.68
CDKN1B-201ENST00000228872 ZNF268Q14587 947 aaPredicted RBP19.28■□□□□ 0.68
CDKN1B-201ENST00000228872 UNC13DQ70J99 1090 aa19.28■□□□□ 0.68
CDKN1B-201ENST00000228872 DAGLBQ8NCG7 672 aa19.28■□□□□ 0.68
CDKN1B-201ENST00000228872 ZNF384Q8TF68 577 aa19.28■□□□□ 0.68
CDKN1B-201ENST00000228872 ZNF570Q96NI8 536 aa19.28■□□□□ 0.68
CDKN1B-201ENST00000228872 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.28■□□□□ 0.685e-8■■■□□ 15.8
CDKN1B-201ENST00000228872 KCNMB3Q9NPA1 279 aa19.28■□□□□ 0.68
CDKN1B-201ENST00000228872 PANK4Q9NVE7 773 aa19.28■□□□□ 0.68
CDKN1B-201ENST00000228872 NOP53Q9NZM5 478 aaKnown RBP19.28■□□□□ 0.68
CDKN1B-201ENST00000228872 BTNL10A8MVZ5 291 aa19.27■□□□□ 0.68
CDKN1B-201ENST00000228872 CCDC188H7C350 402 aa19.27■□□□□ 0.68
CDKN1B-201ENST00000228872 CAND2O75155 1236 aa19.27■□□□□ 0.68
CDKN1B-201ENST00000228872 INHBEP58166 350 aa19.27■□□□□ 0.68
CDKN1B-201ENST00000228872 ARID5AQ03989 594 aa19.27■□□□□ 0.68
CDKN1B-201ENST00000228872 RAPGEF1Q13905 1077 aa19.27■□□□□ 0.68
CDKN1B-201ENST00000228872 SLMAPQ14BN4 828 aa19.27■□□□□ 0.68
CDKN1B-201ENST00000228872 TXNRD3Q86VQ6 643 aa19.27■□□□□ 0.68
CDKN1B-201ENST00000228872 ATXN2LQ8WWM7 1075 aaKnown RBP19.27■□□□□ 0.68
CDKN1B-201ENST00000228872 MMTAG2Q9BU76 263 aaKnown RBP19.27■□□□□ 0.68
CDKN1B-201ENST00000228872 KIF9Q9HAQ2 790 aa19.27■□□□□ 0.68
CDKN1B-201ENST00000228872 MYMKA6NI61 221 aa19.27■□□□□ 0.67
CDKN1B-201ENST00000228872 KRIT1O00522 736 aa19.27■□□□□ 0.67
CDKN1B-201ENST00000228872 ITGA4P13612 1032 aa19.27■□□□□ 0.67
CDKN1B-201ENST00000228872 ALADP13716 330 aa19.27■□□□□ 0.67
CDKN1B-201ENST00000228872 NPR1P16066 1061 aa19.27■□□□□ 0.67
CDKN1B-201ENST00000228872 EIF3BP55884 814 aaKnown RBP19.27■□□□□ 0.67
CDKN1B-201ENST00000228872 ICA1Q05084 483 aa19.27■□□□□ 0.67
CDKN1B-201ENST00000228872 BIRC2Q13490 618 aa19.27■□□□□ 0.67
CDKN1B-201ENST00000228872 FAM133BQ5BKY9 247 aaKnown RBP19.27■□□□□ 0.67
CDKN1B-201ENST00000228872 LRRC34Q8IZ02 419 aa19.27■□□□□ 0.67
CDKN1B-201ENST00000228872 METTL13Q8N6R0 699 aa19.27■□□□□ 0.67
CDKN1B-201ENST00000228872 SEC14L1Q92503 715 aa19.27■□□□□ 0.67
CDKN1B-201ENST00000228872 AGAP1Q9UPQ3 857 aa19.27■□□□□ 0.67
CDKN1B-201ENST00000228872 EME2A4GXA9 379 aaPredicted RBP19.26■□□□□ 0.67
CDKN1B-201ENST00000228872 KLHL30Q0D2K2 578 aa19.26■□□□□ 0.67
CDKN1B-201ENST00000228872 ENOX2Q16206 610 aaKnown RBP19.26■□□□□ 0.67
CDKN1B-201ENST00000228872 PTPROQ16827 1216 aa19.26■□□□□ 0.67
CDKN1B-201ENST00000228872 SV2BQ7L1I2 683 aa19.26■□□□□ 0.67
CDKN1B-201ENST00000228872 TRPM8Q7Z2W7 1104 aa19.26■□□□□ 0.67
CDKN1B-201ENST00000228872 SLC51AQ86UW1 340 aa19.26■□□□□ 0.67
CDKN1B-201ENST00000228872 SLITRK6Q9H5Y7 841 aa19.26■□□□□ 0.67
CDKN1B-201ENST00000228872 MYH7BA7E2Y1 1941 aa19.26■□□□□ 0.67
CDKN1B-201ENST00000228872 PVALEFA0A1B0GWK0 134 aa19.26■□□□□ 0.67
CDKN1B-201ENST00000228872 USP17L12C9JPN9 530 aa19.26■□□□□ 0.67
CDKN1B-201ENST00000228872 USP17L21D6R901 530 aa19.26■□□□□ 0.67
CDKN1B-201ENST00000228872 TTI1O43156 1089 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms