RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 MCM4P33991 863 aa14.49□□□□□ -0.09
PHGDH-220ENST00000641570 STAT5BP51692 787 aa14.49□□□□□ -0.09
PHGDH-220ENST00000641570 RESP18Q5W5W9 173 aa14.49□□□□□ -0.09
PHGDH-220ENST00000641570 TRMT1LQ7Z2T5 733 aaKnown RBP14.49□□□□□ -0.09
PHGDH-220ENST00000641570 KCTD17Q8N5Z5 321 aa14.49□□□□□ -0.09
PHGDH-220ENST00000641570 TRPV1Q8NER1 839 aa14.49□□□□□ -0.09
PHGDH-220ENST00000641570 LENG1Q96BZ8 264 aaPredicted RBP14.49□□□□□ -0.09
PHGDH-220ENST00000641570 DYDC2Q96IM9 177 aa14.49□□□□□ -0.09
PHGDH-220ENST00000641570 NACC1Q96RE7 527 aa14.49□□□□□ -0.09
PHGDH-220ENST00000641570 POLR3CQ9BUI4 534 aaPredicted RBP14.49□□□□□ -0.09
PHGDH-220ENST00000641570 UNC93B1Q9H1C4 597 aa14.49□□□□□ -0.09
PHGDH-220ENST00000641570 NRBP2Q9NSY0 501 aa14.49□□□□□ -0.09
PHGDH-220ENST00000641570 BMP2KQ9NSY1 1161 aaPredicted RBP14.49□□□□□ -0.09
PHGDH-220ENST00000641570 ERAP1Q9NZ08 941 aa14.49□□□□□ -0.09
PHGDH-220ENST00000641570 SEPT9Q9UHD8 586 aaPredicted RBP14.49□□□□□ -0.09
PHGDH-220ENST00000641570 USP25Q9UHP3 1055 aa14.49□□□□□ -0.09
PHGDH-220ENST00000641570 KCNH3Q9ULD8 1083 aa14.49□□□□□ -0.09
PHGDH-220ENST00000641570 GNEQ9Y223 722 aaKnown RBP14.49□□□□□ -0.09
PHGDH-220ENST00000641570 LCTP09848 1927 aa14.49□□□□□ -0.09
PHGDH-220ENST00000641570 ARHGEF35A5YM69 484 aa14.48□□□□□ -0.09
PHGDH-220ENST00000641570 CCNE2O96020 404 aa14.48□□□□□ -0.09
PHGDH-220ENST00000641570 PGK1P00558 417 aa14.48□□□□□ -0.09
PHGDH-220ENST00000641570 TFRCP02786 760 aaKnown RBP14.48□□□□□ -0.09
PHGDH-220ENST00000641570 PFKFB1P16118 471 aa14.48□□□□□ -0.09
PHGDH-220ENST00000641570 RPA1P27694 616 aa14.48□□□□□ -0.09
PHGDH-220ENST00000641570 GJA9P57773 515 aa14.48□□□□□ -0.09
PHGDH-220ENST00000641570 AMPD3Q01432 767 aa14.48□□□□□ -0.09
PHGDH-220ENST00000641570 CTTNQ14247 550 aaKnown RBP14.48□□□□□ -0.09
PHGDH-220ENST00000641570 KARSQ15046 597 aaKnown RBP14.48□□□□□ -0.09
PHGDH-220ENST00000641570 HSDL1Q3SXM5 330 aa14.48□□□□□ -0.09
PHGDH-220ENST00000641570 PDILTQ8N807 584 aa14.48□□□□□ -0.09
PHGDH-220ENST00000641570 DHX58Q96C10 678 aa14.48□□□□□ -0.09
PHGDH-220ENST00000641570 EPSTI1Q96J88 318 aa14.48□□□□□ -0.09
PHGDH-220ENST00000641570 DEFB118Q96PH6 123 aa14.48□□□□□ -0.09
PHGDH-220ENST00000641570 CCSER1Q9C0I3 900 aa14.48□□□□□ -0.09
PHGDH-220ENST00000641570 CUEDC2Q9H467 287 aa14.48□□□□□ -0.09
PHGDH-220ENST00000641570 MAGEF1Q9HAY2 307 aa14.48□□□□□ -0.09
PHGDH-220ENST00000641570 DDX19AQ9NUU7 478 aaKnown RBP14.48□□□□□ -0.09
PHGDH-220ENST00000641570 STK17AQ9UEE5 414 aa14.48□□□□□ -0.09
PHGDH-220ENST00000641570 KIAA1024Q9UPX6 916 aa14.48□□□□□ -0.09
PHGDH-220ENST00000641570 MYH15Q9Y2K3 1946 aa14.48□□□□□ -0.09
PHGDH-220ENST00000641570 EMSYQ7Z589 1322 aa14.47□□□□□ -0.09
PHGDH-220ENST00000641570 LRRC37A2A6NM11 1700 aa14.47□□□□□ -0.09
PHGDH-220ENST00000641570 A0A1B0GVL5 298 aa14.47□□□□□ -0.09
PHGDH-220ENST00000641570 POTEB3A0JP26 581 aa14.47□□□□□ -0.09
PHGDH-220ENST00000641570 PP2D1A8MPX8 630 aa14.47□□□□□ -0.09
PHGDH-220ENST00000641570 EML1O00423 815 aa14.47□□□□□ -0.09
PHGDH-220ENST00000641570 POLR2DO15514 142 aaKnown RBP14.47□□□□□ -0.09
PHGDH-220ENST00000641570 CABYRO75952 493 aa14.47□□□□□ -0.09
PHGDH-220ENST00000641570 LGALS2P05162 132 aa14.47□□□□□ -0.09
PHGDH-220ENST00000641570 ZNF286BP0CG31 522 aa14.47□□□□□ -0.09
PHGDH-220ENST00000641570 CAPN2P17655 700 aa14.47□□□□□ -0.09
PHGDH-220ENST00000641570 MARK3P27448 753 aa14.47□□□□□ -0.09
PHGDH-220ENST00000641570 CDC25AP30304 524 aa14.47□□□□□ -0.09
PHGDH-220ENST00000641570 BEX3Q00994 111 aa14.47□□□□□ -0.09
PHGDH-220ENST00000641570 PRKCEQ02156 737 aa14.47□□□□□ -0.09
PHGDH-220ENST00000641570 FAM160A1Q05DH4 1040 aa14.47□□□□□ -0.09
PHGDH-220ENST00000641570 SKOR2Q2VWA4 1001 aaPredicted RBP14.47□□□□□ -0.09
PHGDH-220ENST00000641570 KANK3Q6NY19 840 aa14.47□□□□□ -0.09
PHGDH-220ENST00000641570 POTEBQ6S5H4 581 aa14.47□□□□□ -0.09
PHGDH-220ENST00000641570 ABHD15Q6UXT9 468 aa14.47□□□□□ -0.09
PHGDH-220ENST00000641570 PLPPR4Q7Z2D5 763 aa14.47□□□□□ -0.09
PHGDH-220ENST00000641570 EXOC8Q8IYI6 725 aa14.47□□□□□ -0.09
PHGDH-220ENST00000641570 CNNM3Q8NE01 707 aa14.47□□□□□ -0.09
PHGDH-220ENST00000641570 CCDC47Q96A33 483 aaKnown RBP14.47□□□□□ -0.09
PHGDH-220ENST00000641570 ZNF333Q96JL9 665 aa14.47□□□□□ -0.09
PHGDH-220ENST00000641570 PLIN2Q99541 437 aa14.47□□□□□ -0.09
PHGDH-220ENST00000641570 MTG1Q9BT17 334 aaPredicted RBP14.47□□□□□ -0.09
PHGDH-220ENST00000641570 MCOLN1Q9GZU1 580 aa14.47□□□□□ -0.09
PHGDH-220ENST00000641570 CEP350Q5VT06 3117 aa14.46□□□□□ -0.09
PHGDH-220ENST00000641570 POTEFA5A3E0 1075 aa14.46□□□□□ -0.09
PHGDH-220ENST00000641570 MOXD2PA6NHM9 499 aa14.46□□□□□ -0.09
PHGDH-220ENST00000641570 A6NJR5 290 aa14.46□□□□□ -0.09
PHGDH-220ENST00000641570 OATP04181 439 aa14.46□□□□□ -0.09
PHGDH-220ENST00000641570 GNAT1P11488 350 aa14.46□□□□□ -0.09
PHGDH-220ENST00000641570 PLCG1P19174 1290 aa14.46□□□□□ -0.09
PHGDH-220ENST00000641570 YWHABP31946 246 aaKnown RBP14.46□□□□□ -0.09
PHGDH-220ENST00000641570 GRIN1Q05586 938 aa14.46□□□□□ -0.09
PHGDH-220ENST00000641570 SPIRE1Q08AE8 756 aa14.46□□□□□ -0.09
PHGDH-220ENST00000641570 IL17AQ16552 155 aa14.46□□□□□ -0.09
PHGDH-220ENST00000641570 XKR3Q5GH77 459 aa14.46□□□□□ -0.09
PHGDH-220ENST00000641570 FAM47CQ5HY64 1035 aa14.46□□□□□ -0.09
PHGDH-220ENST00000641570 AXDND1Q5T1B0 1012 aaPredicted RBP14.46□□□□□ -0.09
PHGDH-220ENST00000641570 POTEGQ6S5H5 508 aa14.46□□□□□ -0.09
PHGDH-220ENST00000641570 SHC4Q6S5L8 630 aa14.46□□□□□ -0.09
PHGDH-220ENST00000641570 SV2BQ7L1I2 683 aa14.46□□□□□ -0.09
PHGDH-220ENST00000641570 CCDC60Q8IWA6 550 aaPredicted RBP14.46□□□□□ -0.09
PHGDH-220ENST00000641570 C7orf31Q8N865 590 aa14.46□□□□□ -0.09
PHGDH-220ENST00000641570 ARMC5Q96C12 935 aa14.46□□□□□ -0.09
PHGDH-220ENST00000641570 GLT1D1Q96MS3 346 aa14.46□□□□□ -0.09
PHGDH-220ENST00000641570 JPH2Q9BR39 696 aaPredicted RBP14.46□□□□□ -0.09
PHGDH-220ENST00000641570 PANK2Q9BZ23 570 aa14.46□□□□□ -0.09
PHGDH-220ENST00000641570 UPF3AQ9H1J1 476 aaKnown RBP14.46□□□□□ -0.09
PHGDH-220ENST00000641570 RGL1Q9NZL6 768 aa14.46□□□□□ -0.09
PHGDH-220ENST00000641570 GSTTP1A0A1W2PQM5 241 aa14.45□□□□□ -0.1
PHGDH-220ENST00000641570 H3BRB1 525 aa14.45□□□□□ -0.1
PHGDH-220ENST00000641570 MED24O75448 989 aa14.45□□□□□ -0.1
PHGDH-220ENST00000641570 IGHA2P01877 340 aa14.45□□□□□ -0.1
PHGDH-220ENST00000641570 DHX8Q14562 1220 aaKnown RBP14.45□□□□□ -0.1
PHGDH-220ENST00000641570 MFSD10Q14728 455 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms