RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 DIS3Q9Y2L1 958 aaKnown RBP9.34□□□□□ -0.91
HNRNPU-219ENST00000639628 LRRN2O75325 713 aa9.34□□□□□ -0.91
HNRNPU-219ENST00000639628 MAN1A1P33908 653 aa9.34□□□□□ -0.91
HNRNPU-219ENST00000639628 PPP4CP60510 307 aa9.34□□□□□ -0.91
HNRNPU-219ENST00000639628 DHX9Q08211 1270 aaKnown RBP9.34□□□□□ -0.91
HNRNPU-219ENST00000639628 TBX2Q13207 712 aaPredicted RBP9.34□□□□□ -0.91
HNRNPU-219ENST00000639628 CCDC6Q16204 474 aa9.34□□□□□ -0.91
HNRNPU-219ENST00000639628 PDXDC2PQ6P474 469 aa9.34□□□□□ -0.91
HNRNPU-219ENST00000639628 FHOD1Q9Y613 1164 aa9.34□□□□□ -0.91
HNRNPU-219ENST00000639628 CNTNAP4Q9C0A0 1308 aa9.34□□□□□ -0.91
HNRNPU-219ENST00000639628 SLC26A4O43511 780 aa9.34□□□□□ -0.91
HNRNPU-219ENST00000639628 CRKP46108 304 aa9.34□□□□□ -0.91
HNRNPU-219ENST00000639628 EIF3BP55884 814 aaKnown RBP9.34□□□□□ -0.91
HNRNPU-219ENST00000639628 BPIFB4P59827 614 aa9.34□□□□□ -0.91
HNRNPU-219ENST00000639628 ERVK-24P63145 666 aa9.34□□□□□ -0.91
HNRNPU-219ENST00000639628 GNPTABQ3T906 1256 aa9.34□□□□□ -0.91
HNRNPU-219ENST00000639628 ARHGEF16Q5VV41 709 aa9.34□□□□□ -0.91
HNRNPU-219ENST00000639628 RCSD1Q6JBY9 416 aa9.34□□□□□ -0.91
HNRNPU-219ENST00000639628 TRIM65Q6PJ69 517 aa9.34□□□□□ -0.91
HNRNPU-219ENST00000639628 CDAN1Q8IWY9 1227 aa9.34□□□□□ -0.91
HNRNPU-219ENST00000639628 RHOT2Q8IXI1 618 aa9.34□□□□□ -0.91
HNRNPU-219ENST00000639628 GSPT2Q8IYD1 628 aaKnown RBP9.34□□□□□ -0.91
HNRNPU-219ENST00000639628 LINC00116Q8NCU8 138 aa9.34□□□□□ -0.91
HNRNPU-219ENST00000639628 MAD2L2Q9UI95 211 aa9.34□□□□□ -0.91
HNRNPU-219ENST00000639628 TBC1D8O95759 1140 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 APBA3O96018 575 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 HOXA13P31271 388 aaPredicted RBP9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 UBXN2AP68543 259 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 ADGRA1Q86SQ6 560 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 BBOF1Q8ND07 529 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 RSRC1Q96IZ7 334 aaKnown RBP9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 DNAJC7Q99615 494 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 MAK16Q9BXY0 300 aaKnown RBP9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 TRIM10Q9UDY6 481 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 ATP8A1Q9Y2Q0 1164 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 BCL9O00512 1426 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 FAM170AA1A519 330 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 MYMKA6NI61 221 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 NCK2O43639 380 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 LIG4P49917 911 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 FXR2P51116 673 aaKnown RBP eCLIP9.33□□□□□ -0.923e-11■□□□□ 9.5
HNRNPU-219ENST00000639628 MRPS25P82663 173 aaKnown RBP9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 ZNF543Q08ER8 600 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 CTTNQ14247 550 aaKnown RBP9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 SLC10A5Q5PT55 438 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 PODNQ7Z5L7 613 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 FAM160B2Q86V87 743 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 HPS3Q969F9 1004 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 FAM81BQ96LP2 452 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 FMO2Q99518 471 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 AP1M1Q9BXS5 423 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 CNOT10Q9H9A5 744 aaKnown RBP9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 PSD3Q9NYI0 1048 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 TCHHQ07283 1943 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 DLATP10515 647 aaKnown RBP9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 ADCY8P40145 1251 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 PLA2G4AP47712 749 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 MXI1P50539 228 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 FYB2Q5VWT5 728 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 FRMD5Q7Z6J6 570 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 DEPTORQ8TB45 409 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 NBPF3Q9H094 633 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 KBTBD4Q9NVX7 518 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 RIC1Q4ADV7 1423 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 POTEFA5A3E0 1075 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 POTEIP0CG38 1075 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 STX2P32856 288 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 NSFP46459 744 aaKnown RBP9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 PLTPP55058 493 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 MDM2Q00987 491 aaPredicted RBP9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 PTK2Q05397 1052 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 POTEGQ6S5H5 508 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 POTEEQ6S8J3 1075 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 CNKSR2Q8WXI2 1034 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 POMGNT1Q8WZA1 660 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 ZNF653Q96CK0 615 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 TRIM11Q96F44 468 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 UBE2TQ9NPD8 197 aaPredicted RBP9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 DNAJC12Q9UKB3 198 aa9.33□□□□□ -0.92
HNRNPU-219ENST00000639628 LTN1O94822 1766 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 PALM3A6NDB9 673 aaPredicted RBP9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 MYO1FO00160 1098 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 PDHBP11177 359 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 ATP11AP98196 1134 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 BARGINQ6ZT62 677 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 PNMA8AQ86V59 439 aaPredicted RBP9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 NOA1Q8NC60 698 aaKnown RBP9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 SEL1LQ9UBV2 794 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 DAGLAQ9Y4D2 1042 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 GH2P01242 217 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 FGGP02679 453 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 KRT15P19012 456 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 DR1Q01658 176 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 SLC18A3Q16572 532 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 FIGNQ5HY92 759 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 CCNI2Q6ZMN8 369 aaPredicted RBP9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 DPH6Q7L8W6 267 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 NEK9Q8TD19 979 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms