RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 SWAP70Q9UH65 585 aa6.37□□□□□ -1.39
HERC1-213ENST00000561359 DYRK1BQ9Y463 629 aa6.37□□□□□ -1.39
HERC1-213ENST00000561359 USP15Q9Y4E8 981 aaPredicted RBP6.37□□□□□ -1.39
HERC1-213ENST00000561359 PCDHGC5Q9Y5F6 944 aa6.37□□□□□ -1.39
HERC1-213ENST00000561359 FLNBO75369 2602 aaKnown RBP6.36□□□□□ -1.39
HERC1-213ENST00000561359 RBAK-RBAKDNI3L0D1 243 aa6.36□□□□□ -1.39
HERC1-213ENST00000561359 ATP2A1O14983 1001 aa6.36□□□□□ -1.39
HERC1-213ENST00000561359 GRM6O15303 877 aa6.36□□□□□ -1.39
HERC1-213ENST00000561359 SRGAP3O43295 1099 aa6.36□□□□□ -1.39
HERC1-213ENST00000561359 KPNA6O60684 536 aa6.36□□□□□ -1.39
HERC1-213ENST00000561359 IGSF3O75054 1194 aa6.36□□□□□ -1.39
HERC1-213ENST00000561359 CYP2D6P10635 497 aa6.36□□□□□ -1.39
HERC1-213ENST00000561359 CKBP12277 381 aa6.36□□□□□ -1.39
HERC1-213ENST00000561359 SKIP12755 728 aa6.36□□□□□ -1.39
HERC1-213ENST00000561359 PHKA2P46019 1235 aa6.36□□□□□ -1.39
HERC1-213ENST00000561359 KREMEN2Q8NCW0 462 aa6.36□□□□□ -1.39
HERC1-213ENST00000561359 CCDC17Q96LX7 622 aa6.36□□□□□ -1.39
HERC1-213ENST00000561359 WDR11Q9BZH6 1224 aa6.36□□□□□ -1.39
HERC1-213ENST00000561359 CRNKL1Q9BZJ0 848 aaKnown RBP6.36□□□□□ -1.39
HERC1-213ENST00000561359 LMAN2LQ9H0V9 348 aa6.36□□□□□ -1.39
HERC1-213ENST00000561359 ACAD9Q9H845 621 aa6.36□□□□□ -1.39
HERC1-213ENST00000561359 KANSL2Q9H9L4 492 aa6.36□□□□□ -1.39
HERC1-213ENST00000561359 SLC38A10Q9HBR0 1119 aa6.36□□□□□ -1.39
HERC1-213ENST00000561359 VTA1Q9NP79 307 aa6.36□□□□□ -1.39
HERC1-213ENST00000561359 CUEDC1Q9NWM3 386 aaPredicted RBP6.36□□□□□ -1.39
HERC1-213ENST00000561359 MYH1P12882 1939 aa6.36□□□□□ -1.39
HERC1-213ENST00000561359 SETXQ7Z333 2677 aaKnown RBP6.36□□□□□ -1.39
HERC1-213ENST00000561359 COL11A1P12107 1806 aaPredicted RBP6.36□□□□□ -1.39
HERC1-213ENST00000561359 ZFYVE26Q68DK2 2539 aa6.35□□□□□ -1.39
HERC1-213ENST00000561359 PTPRSQ13332 1948 aa6.35□□□□□ -1.39
HERC1-213ENST00000561359 OTOGLQ3ZCN5 2332 aa6.35□□□□□ -1.39
HERC1-213ENST00000561359 SPATA31C2B4DYI2 1134 aa6.35□□□□□ -1.39
HERC1-213ENST00000561359 LGR5O75473 907 aa6.35□□□□□ -1.39
HERC1-213ENST00000561359 STAU1O95793 577 aaKnown RBP6.35□□□□□ -1.39
HERC1-213ENST00000561359 RB1P06400 928 aa6.35□□□□□ -1.39
HERC1-213ENST00000561359 SP100P23497 879 aaPredicted RBP6.35□□□□□ -1.39
HERC1-213ENST00000561359 KRT76Q01546 638 aa6.35□□□□□ -1.39
HERC1-213ENST00000561359 COASYQ13057 564 aa6.35□□□□□ -1.39
HERC1-213ENST00000561359 DDX10Q13206 875 aaKnown RBP6.35□□□□□ -1.39
HERC1-213ENST00000561359 G3BP1Q13283 466 aaKnown RBP eCLIP6.35□□□□□ -1.39
HERC1-213ENST00000561359 ANGPT1Q15389 498 aa6.35□□□□□ -1.39
HERC1-213ENST00000561359 TLR1Q15399 786 aa6.35□□□□□ -1.39
HERC1-213ENST00000561359 EML3Q32P44 896 aa6.35□□□□□ -1.39
HERC1-213ENST00000561359 KIAA0319Q5VV43 1072 aa6.35□□□□□ -1.39
HERC1-213ENST00000561359 GDF6Q6KF10 455 aaPredicted RBP6.35□□□□□ -1.39
HERC1-213ENST00000561359 TRIM22Q8IYM9 498 aa6.35□□□□□ -1.39
HERC1-213ENST00000561359 UBALD2Q8IYN6 164 aa6.35□□□□□ -1.39
HERC1-213ENST00000561359 FIBCD1Q8N539 461 aa6.35□□□□□ -1.39
HERC1-213ENST00000561359 DBF4BQ8NFT6 615 aa6.35□□□□□ -1.39
HERC1-213ENST00000561359 DHX38Q92620 1227 aaKnown RBP6.35□□□□□ -1.39
HERC1-213ENST00000561359 HAUS7Q99871 368 aa6.35□□□□□ -1.39
HERC1-213ENST00000561359 DBNDD2Q9BQY9 259 aa6.35□□□□□ -1.39
HERC1-213ENST00000561359 IFIH1Q9BYX4 1025 aaKnown RBP6.35□□□□□ -1.39
HERC1-213ENST00000561359 SEMA4AQ9H3S1 761 aa6.35□□□□□ -1.39
HERC1-213ENST00000561359 A1CFQ9NQ94 594 aaKnown RBP6.35□□□□□ -1.39
HERC1-213ENST00000561359 RNF146Q9NTX7 359 aa6.35□□□□□ -1.39
HERC1-213ENST00000561359 CLEC1BQ9P126 229 aa6.35□□□□□ -1.39
HERC1-213ENST00000561359 BARX2Q9UMQ3 279 aaPredicted RBP6.35□□□□□ -1.39
HERC1-213ENST00000561359 FOCADQ5VW36 1801 aa6.34□□□□□ -1.39
HERC1-213ENST00000561359 C5orf67F2Z3F1 127 aa6.34□□□□□ -1.39
HERC1-213ENST00000561359 PIK3CDO00329 1044 aa6.34□□□□□ -1.39
HERC1-213ENST00000561359 NDUFB10O96000 172 aa6.34□□□□□ -1.39
HERC1-213ENST00000561359 ATF7P17544 494 aaPredicted RBP6.34□□□□□ -1.39
HERC1-213ENST00000561359 LORP23490 312 aaPredicted RBP6.34□□□□□ -1.39
HERC1-213ENST00000561359 BMPR1AP36894 532 aa6.34□□□□□ -1.39
HERC1-213ENST00000561359 CDK8P49336 464 aa6.34□□□□□ -1.39
HERC1-213ENST00000561359 CLCN5P51795 746 aa6.34□□□□□ -1.39
HERC1-213ENST00000561359 OAZ1P54368 228 aa6.34□□□□□ -1.39
HERC1-213ENST00000561359 GDF10P55107 478 aa6.34□□□□□ -1.39
HERC1-213ENST00000561359 MTMR3Q13615 1198 aa6.34□□□□□ -1.39
HERC1-213ENST00000561359 PPP2R5BQ15173 497 aa6.34□□□□□ -1.39
HERC1-213ENST00000561359 WDR44Q5JSH3 913 aa6.34□□□□□ -1.39
HERC1-213ENST00000561359 RNFT1Q5M7Z0 435 aa6.34□□□□□ -1.39
HERC1-213ENST00000561359 ZNF618Q5T7W0 954 aa6.34□□□□□ -1.39
HERC1-213ENST00000561359 EFHBQ8N7U6 833 aa6.34□□□□□ -1.39
HERC1-213ENST00000561359 FLCNQ8NFG4 579 aa6.34□□□□□ -1.39
HERC1-213ENST00000561359 CYP2W1Q8TAV3 490 aa6.34□□□□□ -1.39
HERC1-213ENST00000561359 SDR42E1Q8WUS8 393 aa6.34□□□□□ -1.39
HERC1-213ENST00000561359 RUBCNQ92622 972 aa6.34□□□□□ -1.39
HERC1-213ENST00000561359 TOP1MTQ969P6 601 aa6.34□□□□□ -1.39
HERC1-213ENST00000561359 ZNF837Q96EG3 531 aaPredicted RBP6.34□□□□□ -1.39
HERC1-213ENST00000561359 IL17RAQ96F46 866 aa6.34□□□□□ -1.39
HERC1-213ENST00000561359 GMCL1Q96IK5 515 aa6.34□□□□□ -1.39
HERC1-213ENST00000561359 CTAGE1Q96RT6 745 aa6.34□□□□□ -1.39
HERC1-213ENST00000561359 RIOK1Q9BRS2 568 aaKnown RBP6.34□□□□□ -1.39
HERC1-213ENST00000561359 ETNK1Q9HBU6 452 aa6.34□□□□□ -1.39
HERC1-213ENST00000561359 GPAMQ9HCL2 828 aa6.34□□□□□ -1.39
HERC1-213ENST00000561359 DCP1AQ9NPI6 582 aaPredicted RBP6.34□□□□□ -1.39
HERC1-213ENST00000561359 SH2B1Q9NRF2 756 aaPredicted RBP6.34□□□□□ -1.39
HERC1-213ENST00000561359 ISY1Q9ULR0 285 aaKnown RBP6.34□□□□□ -1.39
HERC1-213ENST00000561359 TRIP12Q14669 1992 aaPredicted RBP6.34□□□□□ -1.39
HERC1-213ENST00000561359 EMSYQ7Z589 1322 aa6.33□□□□□ -1.4
HERC1-213ENST00000561359 TANC1Q9C0D5 1861 aa6.33□□□□□ -1.4
HERC1-213ENST00000561359 A6NJR5 290 aa6.33□□□□□ -1.4
HERC1-213ENST00000561359 F5H6K3 240 aa6.33□□□□□ -1.4
HERC1-213ENST00000561359 BRD1O95696 1058 aa6.33□□□□□ -1.4
HERC1-213ENST00000561359 F11P03951 625 aa6.33□□□□□ -1.4
HERC1-213ENST00000561359 ALAS1P13196 640 aa6.33□□□□□ -1.4
HERC1-213ENST00000561359 SDHBP21912 280 aa6.33□□□□□ -1.4
HERC1-213ENST00000561359 NRIP1P48552 1158 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms